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SNP position as rownames #3

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feixue1039 opened this issue Sep 2, 2019 · 0 comments
Open

SNP position as rownames #3

feixue1039 opened this issue Sep 2, 2019 · 0 comments

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@feixue1039
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Hi,
I was trying to use Hapi to construct haplotype based on SNPs of single cell sperms. I noticed that when read in SNP arrays, Hapi use SNP position as rownames. However, for my dataset, the SNP position is not unique (like SNPs at Chr1:100000 and Chr2:100000 will have the same rownames '100000'). I'm not sure, but will this be a problem?
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