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base repository: roblanf/sarscov2phylo
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base: 09-7-20
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head repository: roblanf/sarscov2phylo
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Commits on Jul 10, 2020
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Commits on Jul 12, 2020
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Commits on Jul 24, 2020
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Commits on Aug 3, 2020
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Commits on Aug 7, 2020
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details stil coming, but fasttree is still the best for now I think.
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Create add_seqs_to_global_tree.sh
This was a first attempt at this, but it lacks robustness, so I think I need to redesign it.
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Commits on Aug 14, 2020
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Commits on Aug 15, 2020
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first attempt at a full iterative approach
something like online phylogenetics, or at least, a start.
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Commits on Aug 17, 2020
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in case things like lnL values are useful in future
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Commits on Aug 18, 2020
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Commits on Aug 19, 2020
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Commits on Aug 20, 2020
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Commits on Aug 21, 2020
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Commits on Aug 22, 2020
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running it on a new server made me realise I left out some R dependencies. Sorry to users...!
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Commits on Aug 31, 2020
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