diff --git a/Manifest.toml b/Manifest.toml index b2c1811..a389c6d 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -1,9 +1,27 @@ +[[AbstractFFTs]] +deps = ["Compat", "LinearAlgebra"] +git-tree-sha1 = "8d59c3b1463b5e0ad05a3698167f85fac90e184d" +uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" +version = "0.3.2" + [[Arpack]] deps = ["BinaryProvider", "Libdl", "LinearAlgebra", "Random", "SparseArrays", "Test"] git-tree-sha1 = "5b046410fb617d9cf2f8bc0edd5da05a2e5a2ad4" uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" version = "0.2.3" +[[AxisAlgorithms]] +deps = ["Compat", "WoodburyMatrices"] +git-tree-sha1 = "99dabbe853e4f641ab21a676131f2cf9fb29937e" +uuid = "13072b0f-2c55-5437-9ae7-d433b7a33950" +version = "0.3.0" + +[[AxisArrays]] +deps = ["Compat", "Dates", "IntervalSets", "IterTools", "Pkg", "Random", "RangeArrays", "Test"] +git-tree-sha1 = "2e2536e9e6f27c4f8d09d8442b61a7ae0b910c28" +uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" +version = "0.3.0" + [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -15,15 +33,39 @@ version = "0.8.10" [[BinaryProvider]] deps = ["Libdl", "Pkg", "SHA", "Test"] -git-tree-sha1 = "48c147e63431adbcee69bc40b04c3f0fec0a4982" +git-tree-sha1 = "38be61810f280c3c478f5c38aaf387f8f9199275" uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232" -version = "0.5.0" +version = "0.5.1" + +[[CatIndices]] +deps = ["CustomUnitRanges", "OffsetArrays", "Test"] +git-tree-sha1 = "254cf73ea369d2e39bfd6c5eb27a2296cfaed68c" +uuid = "aafaddc9-749c-510e-ac4f-586e18779b91" +version = "0.2.0" + +[[ColorTypes]] +deps = ["FixedPointNumbers", "Random", "Test"] +git-tree-sha1 = "f73b0e10f2a5756de7019818a41654686da06b09" +uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" +version = "0.7.5" + +[[ColorVectorSpace]] +deps = ["ColorTypes", "Colors", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "StatsBase", "Test"] +git-tree-sha1 = "a890f08e61b40e9843d7177206da61229a3603c8" +uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" +version = "0.6.2" + +[[Colors]] +deps = ["ColorTypes", "FixedPointNumbers", "InteractiveUtils", "Pkg", "Printf", "Reexport", "Test"] +git-tree-sha1 = "8c89e0a9a583954eae3efcf6a531e51c02b38cee" +uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" +version = "0.9.4" [[Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "ff2595695fc4f14427358ce2593f867085c45dcb" +git-tree-sha1 = "2d9e14d19bad3f9ad5cc5e4cffabc3cfa59de825" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "1.2.0" +version = "1.3.0" [[ComputationalResources]] deps = ["Pkg", "Test"] @@ -31,6 +73,24 @@ git-tree-sha1 = "89e7e7ed20af73d9f78877d2b8d1194e7b6ff13d" uuid = "ed09eef8-17a6-5b46-8889-db040fac31e3" version = "0.3.0" +[[Conda]] +deps = ["Compat", "JSON", "VersionParsing"] +git-tree-sha1 = "fb86fe40cb5b35990e368709bfdc1b46dbb99dac" +uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d" +version = "1.1.1" + +[[CoordinateTransformations]] +deps = ["Compat", "Rotations", "StaticArrays"] +git-tree-sha1 = "47f05d0b7f4999609f92e657147df000818c1f24" +uuid = "150eb455-5306-5404-9cee-2592286d6298" +version = "0.5.0" + +[[CustomUnitRanges]] +deps = ["Pkg", "Test"] +git-tree-sha1 = "0a106457a1831555857e18ac9617279c22fc393b" +uuid = "dc8bdbbb-1ca9-579f-8c36-e416f6a65cce" +version = "0.2.0" + [[DataStructures]] deps = ["InteractiveUtils", "OrderedCollections", "REPL", "Random", "Serialization", "Test"] git-tree-sha1 = "8fc6e166e24fda04b2b648d4260cdad241788c54" @@ -45,6 +105,12 @@ uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" deps = ["Mmap"] uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" +[[Distances]] +deps = ["LinearAlgebra", "Pkg", "Printf", "Random", "Statistics", "Test"] +git-tree-sha1 = "2f38605722542f1c0a32dd2856fb529d8c226c69" +uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" +version = "0.7.3" + [[Distributed]] deps = ["LinearAlgebra", "Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" @@ -55,10 +121,130 @@ git-tree-sha1 = "c24e9b6500c037673f0241a2783472b8c3d080c7" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" version = "0.16.4" +[[FFTViews]] +deps = ["CustomUnitRanges", "FFTW", "Test"] +git-tree-sha1 = "9d7993227ca7c0fdb6b31deef193adbba11c8f4e" +uuid = "4f61f5a4-77b1-5117-aa51-3ab5ef4ef0cd" +version = "0.2.0" + +[[FFTW]] +deps = ["AbstractFFTs", "BinaryProvider", "Compat", "Conda", "Libdl", "LinearAlgebra", "Pkg", "Reexport", "Test"] +git-tree-sha1 = "29cda58afbf62f35b1a094882ad6c745a47b2eaa" +uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" +version = "0.2.4" + +[[FileIO]] +deps = ["Pkg", "Random", "Test"] +git-tree-sha1 = "481e4db939f005db39f7296599d0543c0744fe30" +uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" +version = "1.0.2" + +[[FixedPointNumbers]] +deps = ["Pkg", "Test"] +git-tree-sha1 = "b8045033701c3b10bf2324d7203404be7aef88ba" +uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93" +version = "0.5.3" + +[[Graphics]] +deps = ["Colors", "Compat", "NaNMath"] +git-tree-sha1 = "e3ead4211073d4117a0d2ef7d1efc5c8092c8412" +uuid = "a2bd30eb-e257-5431-a919-1863eab51364" +version = "0.4.0" + +[[IdentityRanges]] +deps = ["OffsetArrays", "Pkg", "Test"] +git-tree-sha1 = "f5ca23a08397288924a7535cd898d8ccbcde5ba5" +uuid = "bbac6d45-d8f3-5730-bfe4-7a449cd117ca" +version = "0.2.0" + +[[ImageAxes]] +deps = ["AxisArrays", "Colors", "FixedPointNumbers", "ImageCore", "MappedArrays", "Pkg", "Reexport", "SimpleTraits", "Test"] +git-tree-sha1 = "5735ec90843acaa67a4624611921c686cdf4efbf" +uuid = "2803e5a7-5153-5ecf-9a86-9b4c37f5f5ac" +version = "0.5.0" + +[[ImageCore]] +deps = ["ColorTypes", "Colors", "FFTW", "FixedPointNumbers", "Graphics", "MappedArrays", "OffsetArrays", "PaddedViews", "Pkg", "Random", "Statistics", "Test"] +git-tree-sha1 = "5e7b1f49c80541860e08a7ea91805a24c1641f19" +uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" +version = "0.7.3" + +[[ImageDistances]] +deps = ["Colors", "Distances", "LinearAlgebra", "Pkg", "ProgressMeter", "Test"] +git-tree-sha1 = "a5de7b61f6fa98fb93c39857fa43cf40ca383b28" +uuid = "51556ac3-7006-55f5-8cb3-34580c88182d" +version = "0.1.1" + +[[ImageFiltering]] +deps = ["CatIndices", "ColorVectorSpace", "Colors", "ComputationalResources", "DataStructures", "FFTViews", "FFTW", "FixedPointNumbers", "ImageCore", "LinearAlgebra", "Logging", "MappedArrays", "OffsetArrays", "Pkg", "Random", "StaticArrays", "Statistics", "Test", "TiledIteration"] +git-tree-sha1 = "d2e75f9bfe9659f9b90553737e039bab93a66a0a" +uuid = "6a3955dd-da59-5b1f-98d4-e7296123deb5" +version = "0.5.0" + +[[ImageMetadata]] +deps = ["AxisArrays", "ColorVectorSpace", "Colors", "Dates", "FixedPointNumbers", "ImageAxes", "ImageCore", "IndirectArrays", "Pkg", "Statistics", "Test"] +git-tree-sha1 = "3eac47d5b62dfeb4d06ec5be85592ebd437112ea" +uuid = "bc367c6b-8a6b-528e-b4bd-a4b897500b49" +version = "0.5.1" + +[[ImageMorphology]] +deps = ["ImageCore", "Test"] +git-tree-sha1 = "e94f43b9ff76f3a3810bfdd9b3d2fbcacbc26fd0" +uuid = "787d08f9-d448-5407-9aad-5290dd7ab264" +version = "0.1.1" + +[[ImageShow]] +deps = ["Base64", "ColorTypes", "Colors", "FileIO", "FixedPointNumbers", "ImageCore", "InteractiveUtils", "Pkg", "Requires", "Test"] +git-tree-sha1 = "ee5396bd0cf2ce72e34e9b36fd359d7527311973" +uuid = "4e3cecfd-b093-5904-9786-8bbb286a6a31" +version = "0.1.1" + +[[ImageTransformations]] +deps = ["AxisAlgorithms", "ColorTypes", "ColorVectorSpace", "Colors", "CoordinateTransformations", "FixedPointNumbers", "IdentityRanges", "ImageCore", "Interpolations", "LinearAlgebra", "OffsetArrays", "Pkg", "StaticArrays", "Test"] +git-tree-sha1 = "904bcf19c10176fc0725d9fd94c79bcddb392e93" +uuid = "02fcd773-0e25-5acc-982a-7f6622650795" +version = "0.6.0" + +[[Images]] +deps = ["AxisArrays", "Base64", "ColorTypes", "ColorVectorSpace", "Colors", "FileIO", "FixedPointNumbers", "Graphics", "ImageAxes", "ImageCore", "ImageDistances", "ImageFiltering", "ImageMetadata", "ImageMorphology", "ImageShow", "ImageTransformations", "IndirectArrays", "InteractiveUtils", "LinearAlgebra", "MappedArrays", "OffsetArrays", "Pkg", "Random", "Reexport", "SIUnits", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "Test", "TiledIteration"] +git-tree-sha1 = "73e21f66a8968d52ccf93b9c9c6a46e652d33d4e" +uuid = "916415d5-f1e6-5110-898d-aaa5f9f070e0" +version = "0.16.0" + +[[IndirectArrays]] +deps = ["Compat", "Pkg", "Test"] +git-tree-sha1 = "b6e249be10a3381b2c72ac82f2d13d70067cb2bd" +uuid = "9b13fd28-a010-5f03-acff-a1bbcff69959" +version = "0.5.0" + [[InteractiveUtils]] deps = ["LinearAlgebra", "Markdown"] uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" +[[Interpolations]] +deps = ["AxisAlgorithms", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "SharedArrays", "SparseArrays", "StaticArrays", "Test", "WoodburyMatrices"] +git-tree-sha1 = "d3328be2a9624d62957607a8bdfcc164d24f1b6d" +uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" +version = "0.10.3" + +[[IntervalSets]] +deps = ["Compat"] +git-tree-sha1 = "bf1c727a12bbe0beb4888d439ee4e91b9ba7944a" +uuid = "8197267c-284f-5f27-9208-e0e47529a953" +version = "0.3.0" + +[[IterTools]] +deps = ["Pkg", "SparseArrays", "Test"] +git-tree-sha1 = "3eb252416e1a5215530420cdd22b46208bb9d4c7" +uuid = "c8e1da08-722c-5040-9ed9-7db0dc04731e" +version = "1.1.0" + +[[JSON]] +deps = ["Dates", "Distributed", "Mmap", "Pkg", "Sockets", "Test", "Unicode"] +git-tree-sha1 = "fec8e4d433072731466d37ed0061b3ba7f70eeb9" +uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" +version = "0.19.0" + [[LibGit2]] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" @@ -72,6 +258,18 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" +[[MacroTools]] +deps = ["Compat"] +git-tree-sha1 = "c443e1c8d58a4e9f61b708ad0a88286c7042145b" +uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" +version = "0.4.4" + +[[MappedArrays]] +deps = ["Test"] +git-tree-sha1 = "923441c5ac942b60bd3a842d5377d96646bcbf46" +uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" +version = "0.2.1" + [[Markdown]] deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" @@ -85,6 +283,18 @@ version = "0.3.1" [[Mmap]] uuid = "a63ad114-7e13-5084-954f-fe012c677804" +[[NaNMath]] +deps = ["Compat"] +git-tree-sha1 = "ce3b85e484a5d4c71dd5316215069311135fa9f2" +uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" +version = "0.3.2" + +[[OffsetArrays]] +deps = ["DelimitedFiles", "Test"] +git-tree-sha1 = "f8cd140824f74f2948ff8660bc2292e16d29c1b7" +uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" +version = "0.8.1" + [[OrderedCollections]] deps = ["Pkg", "Random", "Serialization", "Test"] git-tree-sha1 = "85619a3f3e17bb4761fe1b1fd47f0e979f964d5b" @@ -97,6 +307,12 @@ git-tree-sha1 = "9e3e7a5c9b8cfdba8c01a1bcae38fe0144936fda" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.9.5" +[[PaddedViews]] +deps = ["OffsetArrays", "Test"] +git-tree-sha1 = "7da3e7e1a58cffbf10177553ae95f17b92516912" +uuid = "5432bcbf-9aad-5242-b902-cca2824c8663" +version = "0.4.2" + [[Pkg]] deps = ["Dates", "LibGit2", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" @@ -106,10 +322,10 @@ deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" [[ProgressMeter]] -deps = ["Printf", "Random", "Test"] -git-tree-sha1 = "09e653f4b0a3c44628f0bdd0a0e58bc92e0264ef" +deps = ["Distributed", "Printf", "Random", "Test"] +git-tree-sha1 = "5b55c2c974084eab2689ec0d1d5245561b22aeb0" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" -version = "0.6.0" +version = "0.6.1" [[QuadGK]] deps = ["DataStructures", "LinearAlgebra", "Test"] @@ -125,15 +341,51 @@ uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" deps = ["Serialization"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" +[[RangeArrays]] +deps = ["Compat"] +git-tree-sha1 = "d925adfd5b01cb46fde89dc9548d167b3b136f4a" +uuid = "b3c3ace0-ae52-54e7-9d0b-2c1406fd6b9d" +version = "0.3.1" + +[[Ratios]] +deps = ["Compat"] +git-tree-sha1 = "fd159bead0a24e6270fd0573a340312bd4645cc2" +uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" +version = "0.3.0" + +[[Reexport]] +deps = ["Pkg"] +git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0" +uuid = "189a3867-3050-52da-a836-e630ba90ab69" +version = "0.2.0" + +[[Requires]] +deps = ["Test"] +git-tree-sha1 = "f6fbf4ba64d295e146e49e021207993b6b48c7d1" +uuid = "ae029012-a4dd-5104-9daa-d747884805df" +version = "0.5.2" + [[Rmath]] deps = ["BinaryProvider", "Libdl", "Pkg", "Random", "Statistics", "Test"] git-tree-sha1 = "9a6c758cdf73036c3239b0afbea790def1dabff9" uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa" version = "0.5.0" +[[Rotations]] +deps = ["LinearAlgebra", "Pkg", "Random", "StaticArrays", "Statistics", "Test"] +git-tree-sha1 = "b629771d0de88979cbdbf72ceddc54de58fde149" +uuid = "6038ab10-8711-5258-84ad-4b1120ba62dc" +version = "0.9.1" + [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" +[[SIUnits]] +deps = ["Compat", "TexExtensions"] +git-tree-sha1 = "224d83b62711fe7e429454aace2c97eb2cf36031" +uuid = "b9d75638-96e3-5676-bdf0-e9c958f63a55" +version = "0.1.0" + [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -141,6 +393,12 @@ uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" deps = ["Distributed", "Mmap", "Random", "Serialization"] uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383" +[[SimpleTraits]] +deps = ["InteractiveUtils", "MacroTools", "Pkg", "Test"] +git-tree-sha1 = "c0a542b8d5e369b179ccd296b2ca987f6da5da0a" +uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" +version = "0.8.0" + [[Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -160,6 +418,12 @@ git-tree-sha1 = "c35c9c76008babf4d658060fc64aeb369a41e7bd" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" version = "0.7.1" +[[StaticArrays]] +deps = ["InteractiveUtils", "LinearAlgebra", "Random", "Statistics", "Test"] +git-tree-sha1 = "d432c79bef174a830304f8601427a4357dfdbfb7" +uuid = "90137ffa-7385-5640-81b9-e52037218182" +version = "0.8.3" + [[Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" @@ -184,6 +448,18 @@ uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" deps = ["Distributed", "InteractiveUtils", "Logging", "Random"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" +[[TexExtensions]] +deps = ["Compat"] +git-tree-sha1 = "092ad55ed044aa5ab31ee800d4ae5bec526a8f09" +uuid = "9b435220-3ad3-5d4f-b1ea-1e7b29ae9b13" +version = "0.1.0" + +[[TiledIteration]] +deps = ["OffsetArrays", "Pkg", "Test"] +git-tree-sha1 = "58f6f07d3b54a363ec283a8f5fc9fb4ecebde656" +uuid = "06e1c1a7-607b-532d-9fad-de7d9aa2abac" +version = "0.2.3" + [[URIParser]] deps = ["Test", "Unicode"] git-tree-sha1 = "6ddf8244220dfda2f17539fa8c9de20d6c575b69" @@ -196,3 +472,15 @@ uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" [[Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" + +[[VersionParsing]] +deps = ["Compat"] +git-tree-sha1 = "c9d5aa108588b978bd859554660c8a5c4f2f7669" +uuid = "81def892-9a0e-5fdd-b105-ffc91e053289" +version = "1.1.3" + +[[WoodburyMatrices]] +deps = ["LinearAlgebra", "Random", "SparseArrays", "Test"] +git-tree-sha1 = "21772c33b447757ec7d3e61fcdfb9ea5c47eedcf" +uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6" +version = "0.4.1" diff --git a/Project.toml b/Project.toml index 6d081b4..2e12b9b 100644 --- a/Project.toml +++ b/Project.toml @@ -6,5 +6,7 @@ authors = ["Romain Franconville "] ComputationalResources = "ed09eef8-17a6-5b46-8889-db040fac31e3" Distributed = "8ba89e20-285c-5b6f-9357-94700520ee1b" Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f" +Images = "916415d5-f1e6-5110-898d-aaa5f9f070e0" +OffsetArrays = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" ProgressMeter = "92933f4c-e287-5a05-a399-4b506db050ca" StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" diff --git a/REQUIRE b/REQUIRE index 9bc45f4..a38cb09 100644 --- a/REQUIRE +++ b/REQUIRE @@ -3,4 +3,6 @@ StatsBase Distributions ProgressMeter ComputationalResources -Distributed \ No newline at end of file +Distributed +Images +OffsetArrays \ No newline at end of file