- The utility functions
assign_date()
,cycle_time()
,round_time()
,shorter_interval()
,longer_interval()
,shorter_duration()
,longer_duration()
,sum_time()
, andvct_sum_time()
were removed. These functions were deprecated onmctq
0.3.2. You can still find them in thelubritime
package. - The utility function
qplot_walk()
was removed. This function was deprecated onmctq
0.3.2. You can still find it in therutils
package. - The
ggplot2
package was removed as an import. It was only needed forqplot_walk()
. - The dependencies versions were updated.
- Code indentation was changed to 2 spaces (it was 4 spaces).
magrittr
pipe (%>%
) was changed to the native R pipe (|>
) when possible.- MCTQ now has a CRAN DOI: 10.32614/CRAN.package.mctq.
- The vignette "Why Duration and not Period?" was removed.
- As of this version, a decoupling process related to some
mctq
utility functions will begin. Please pay attention to the deprecation warnings listed below. - Patch changes were made to
random_mctq()
to avoid warning messages due tolubridate
package updates. - The utility functions
assign_date()
,cycle_time()
,round_time()
,shorter_interval()
,longer_interval()
,shorter_duration()
,longer_duration()
,sum_time()
, andvct_sum_time()
are now deprecated. These functions will be removed on the nextmctq
version. You can still find them in thelubritime
package. - The utility function
qplot_walk()
is now deprecated. This function will be removed on the nextmctq
version. You can still find it in therutils
package. qplot_walk()
now usesggplot2::geom_bar()
orggplot2::geom_histogram()
to generate plots. It usedggplot2::qplot()
before, now deprecated.- The
ggplot2
package was added as an import. It's needed whileqplot_walk()
remains on the package and will be removed from imports in the nextmctq
version. - Mario Pedrazzoli and Ana Amelia Benedito-Silva were removed as authors. They
were Scientific Advisers that helped with the initial
mctq
development, but are not part of themctq
project anymore. - The Interdisciplinary Sleep Research Group (GIPSO) was removed as funder.
GIPSO is a research group that Mario and Daniel Vartanian have built together.
Daniel (the main author and copyright holder of
mctq
) is no longer part of this group. The "funder" status was always symbolic. - The dependencies versions were updated.
- Patch changes were made to adapt the package to R-devel.
- The dependencies versions were updated.
- Re-rendered documentation for compatibility with R-devel.
- Some minor documentation issues were resolved.
mctq
has been self-certified on the OpenSSF Best Practices Badge Program.chronotype()
, a wrapper function formsf_sc()
, was removed.
- Some minor documentation issues were resolved.
shorter_interval()
now don't have theinverse
argument. Uselonger_interval()
instead.shorter_duration()
andlonger_duration()
, two functions that return the shorter and the longer duration between two hours, were introduced.sjl_sc()
andsjl_sc_rel()
, two functions that allow the user to compute Jankowski's MCTQ sleep-corrected social jet lag, were introduced.
- First CRAN release. 🎉
- You can now install
mctq
withinstall.packages("mctq")
. - We decided to wait for a little while before releasing a
1.0.0
(stable)mctq
version. We don't intend to make any breaking changes, but we think is better to wait and see if the user community don't have any issues with the features.
mctq
is now a peer-reviewed package by @ropensci! 🎉- The package repository was transferred to the @ropensci organization. All
links related to
mctq
have been changed. Old links have a redirect protocol to point to the new repository and new website.
- @jonkeane was added as a reviewer ('rev').
- @leocadio-miguel was added as a reviewer ('rev').
assign_date()
now returns onlyInterval
objects.convert()
and allconvert_*()
functions were removed. See a dedicated note about this below.ms()
was renamed tomsl()
. See a dedicated note about this below.sd()
was renamed tosdu()
. See a dedicated note about this below.shortest_interval()
was renamed toshorter_interval()
.shorter_interval()
andlonger_interval()
now returns onlyInterval
objects.sum_time()
now have different arguments and was divided in two functions:sum_time()
(for non-vectorized sums) andvct_sum_time()
(for vectorized sums).sum_time()
now returns onlyDuration
objects.- To avoid any unknown compatibility issues, all packages on imports will now require the latest version of them at the moment of release.
cycle_time()
, a function to cycle time spans, was introduced.
round_time()
is now a S3 generic.- The user interface has gotten more stylish, thanks to the
cli
package (now on imports). - A new vignette was introduced, explaining why the
mctq
package useDuration
instead ofPeriod
(objects from the lubridate package) as the default object for time spans. - Several typos were fixed in the documentation.
- Several functions were optimized.
convert()
was created considering the user experience (sleep and chronobiology
scientists). Since most of them don't have much experience with R and that time
can have different types of representations (e.g., decimal hours, radian),
convert()
aim was to help transpose those difficulties, posing as an
"universal translator" (🖖).
However, after much thought and consideration, we believe that the convert()
feature may be out of the mctq
scope. It can maybe be part of another package
(a lubritime
package perhaps? 😄). Other mctq
tools, like
shorter_interval()
and sum_time()
, could also be a part of that package (but
are necessary in mctq
for the time being). Hence, we decided to remove
convert()
and to instruct the user to check the
lubridate and
hms packages for parsing/conversion.
That was a tough, but necessary, call. Although we tried to preserve the
original author's naming pattern for the MCTQ functions, the name sd
provokes
a dangerous name collision with the widely used stats::sd()
function (standard
deviation) and the name ms
provokes a name collision with lubridate::ms()
(a function for parsing minutes and seconds components). That's why we
decided to renamed them. sdu()
and msl()
are the only exceptions, all the
other mctq
functions maintain a strong naming resemblance with the original
author's naming pattern.
- Added a
NEWS.md
file to track changes to the package.