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dssp conda install #18

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martinpacesa opened this issue Jun 14, 2023 · 2 comments
Closed

dssp conda install #18

martinpacesa opened this issue Jun 14, 2023 · 2 comments

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@martinpacesa
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Hello!

I am unable to install dssp with either conda or mamba on python 3.9 or 3.10, it gives an unexpected error or cannot find any dependencies, does it need to be updated?

Thank you!

@martinpacesa
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martinpacesa commented Jun 14, 2023

This is the error when installing with mamba
shell level : 2 user config file : /home/pacesa/.condarc populated config files : /work/lpdi/users/mpacesa/Pipelines/mambaforge/.condarc conda version : 23.1.0 conda-build version : not installed python version : 3.10.10.final.0 virtual packages : __archspec=1=x86_64 __glibc=2.17=0 __linux=3.10.0=0 __unix=0=0 base environment : /work/lpdi/users/mpacesa/Pipelines/mambaforge (writable) conda av data dir : /work/lpdi/users/mpacesa/Pipelines/mambaforge/etc/conda conda av metadata url : None channel URLs : https://conda.anaconda.org/salilab/linux-64 https://conda.anaconda.org/salilab/noarch https://conda.anaconda.org/conda-forge/linux-64 https://conda.anaconda.org/conda-forge/noarch package cache : /work/lpdi/users/mpacesa/Pipelines/mambaforge/pkgs /home/pacesa/.conda/pkgs envs directories : /work/lpdi/users/mpacesa/Pipelines/mambaforge/envs /home/pacesa/.conda/envs platform : linux-64 user-agent : conda/23.1.0 requests/2.28.2 CPython/3.10.10 Linux/3.10.0-1062.52.2.el7.x86_64 rhel/7.7 glibc/2.17 UID:GID : 255393:10892 netrc file : None offline mode : False

and this with conda (same environment):

`UnsatisfiableError: The following specifications were found
to be incompatible with the existing python installation in your environment:

Specifications:

  • dssp -> python[version='2.7.|3.5.|3.6.|3.4.']

Your python: python=3.9

If python is on the left-most side of the chain, that's the version you've asked for.
When python appears to the right, that indicates that the thing on the left is somehow
not available for the python version you are constrained to. Note that conda will not
change your python version to a different minor version unless you explicitly specify
that.
`

@benmwebb
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Duplicate of #16

@benmwebb benmwebb marked this as a duplicate of #16 Jun 14, 2023
@benmwebb benmwebb closed this as not planned Won't fix, can't repro, duplicate, stale Jun 14, 2023
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