From a0e092ef8f62da98619d998716beee58964c7795 Mon Sep 17 00:00:00 2001 From: Louis Bergelson Date: Thu, 19 Feb 2015 11:23:20 -0500 Subject: [PATCH] removing SAMRecord.setAlignmentEnd it throws unsupported operation exception --- src/java/htsjdk/samtools/SAMRecord.java | 7 ------- 1 file changed, 7 deletions(-) diff --git a/src/java/htsjdk/samtools/SAMRecord.java b/src/java/htsjdk/samtools/SAMRecord.java index 24d6b224d8..362130b20a 100644 --- a/src/java/htsjdk/samtools/SAMRecord.java +++ b/src/java/htsjdk/samtools/SAMRecord.java @@ -513,13 +513,6 @@ public int getReferencePositionAtReadPosition(final int offset) { return 0; // offset not located in an alignment block } - /** - * Unsupported. This property is derived from alignment start and CIGAR. - */ - public void setAlignmentEnd(final int value) { - throw new UnsupportedOperationException("Not supported: setAlignmentEnd"); - } - /** * @return 1-based inclusive leftmost position of the clipped mate sequence, or 0 if there is no position. */