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CHANGELOG.md

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Changelog {#core_changelog}

[TOC]

This changelog contains a top-level entry for each release with sections on new features, API changes and notable bug-fixes (not all bug-fixes will be listed).

0.6.0

Features

  • Added bio::meta::one_of, bio::meta::decays_to and bio::meta::different_from concepts.
  • Added bio::meta::vtag, bio::meta::ttag and bio::meta::priority_tag.
  • Added bio::ranges::back_insertable and bio::ranges::back_insertable_with as light-weight "container" concepts.
  • Added bio::views::char_strictly_to and bio::views::validate_char_for; as well as bio::views::char_conversion_view_t.
  • Added bio::views::transform_by_pos, a more flexible version of std::views::transform.

Bug-fixes

  • Some edge-cases with composite alphabets were fixed.

Misc changes

  • rename bio::alphabet::alphabet_* to bio::alphabet::*, e.g. bio::alphabet::alphabet_variant to bio::alphabet::variant.
  • bio::meta::* several unused traits were removed.
  • bio::ranges::pseudo_random_access_iterator and bio::ranges::pseudo_random_access_range have been removed (because they are not used).
  • bio::ranges::views::to() has been renamed to bio::ranges::to() to be in line with C++23.
  • bio::ranges::sequence concept has been removed (because it is not used.
  • bio::views::get has been removed. Use std::views::elements instead (same functionality).
  • bio::views::translate* have been redefined in terms of bio::views::transform_by_pos (much less code); bio::views::translate_single is now in include/bio/ranges/views/translate_single.hpp.
  • Cleaned up most of the concept mess in composite alphabets.

API

  • This release is not yet API-stable.
  • This release is mostly backwards compatible with 0.5.0 (see changes above).

0.5.0

Features

  • This release is a fork of SeqAn-3.0.2.
  • The feature set is stripped to contain the important "core" aspects: Alphabets and Ranges, as well as metaprogramming support utilities.
  • It has no dependencies.

Some notable changes for users coming from SeqAn3

  • 🧹 Huge code cleanup and countless bug-fixes.
  • ✂ Removal of all dependencies… and… most of the code :)
  • 📦 Separate namespaces for each module.
  • 🏷 Much simpler customisation points by using tag_invoke().
  • 🖨 Replaced the debug_stream with {fmt}.
  • 🛸 More Modern C++ goodness: use of the spaceship operator, consteval, …
  • 📉 Compile-time down.
  • 📈 Performance up (for a few things).

API stability

  • This release is not yet API-stable.
  • This release is not backwards compatible with any BioC++ or SeqAn version.