diff --git a/src/scirpy/pl/_logoplots.py b/src/scirpy/pl/_logoplots.py index 0f8e10baa..c8a06f150 100644 --- a/src/scirpy/pl/_logoplots.py +++ b/src/scirpy/pl/_logoplots.py @@ -13,10 +13,11 @@ @DataHandler.inject_param_docs() def logoplot_cdr3_motif( adata: DataHandler.TYPE, + *, chains: Literal["VJ_1", "VDJ_1", "VJ_2", "VDJ_2"] | Sequence[Literal["VJ_1", "VDJ_1", "VJ_2", "VDJ_2"]] = "VDJ_1", - airr_mod="airr", - airr_key="airr", - chain_idx_key="chain_indices", + airr_mod: str = "airr", + airr_key: str = "airr", + chain_idx_key: str = "chain_indices", cdr3_col: str = "junction_aa", to_type: Sequence[Literal["information", "counts", "probability", "weight"]] = "information", pseudocount: float = 0,