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Releases: siemdejong/sclicom

v4.0.0

20 Mar 12:32
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Fix

  • Update mil config to reflect new signature (c4dc0ed)
  • Filter h5 dataset by filenames (b3e1770)
  • Safely bypass sigint or sigterm (388d368)
  • Remove trainer arguments for pl2 (99194e0)

Breaking

  • train|val|test_path keywords now do not refer to the the target train|val|test paths to output h5 files to, but to the files providing paths_and_targets. file_path is the new target file, containing all images. (b3e1770)

v3.2.1

17 Mar 15:04
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Fix

  • Remove pl2 removed trainer arguments (817beb8)

v3.2.0

17 Mar 14:19
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Feature

  • Automate masking with dlup entropy_masker (1066ea1)
  • Compile the pytorch lightning models (c009004)

Fix

  • Lightning 2.0 ignore missing type imports (08b3e85)
  • Ddp default find_unused_parameters=False (3e2a15d)
  • Use recommended precision (6b654e2)
  • Rename epoch_end to on_epoch_end (37e0c52)
  • Add torch/lightning v2 deps (2afdf05)
  • Simclr-16-3 update (29fdf58)

Performance

  • Do not log to progress bar (da4e3b4)

v3.1.1

15 Mar 13:14
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Fix

v3.1.0

15 Mar 12:40
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Feature

  • Add num_subfolds parameter to create_splits (dfe7ceb)

Fix

  • Splits tests with num_subfolds (3a9d44e)

v3.0.1

15 Mar 10:12
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Fix

  • Update viz of untrained model (e32d9f5)

v3.0.0

15 Mar 09:47
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Feature

  • From torchvision.models to pytorchcv models (bb5732d)
  • Show targets/img_id/case_id distribution (c757995)

Fix

  • Pytorchcv not typed ignore missing imports (2b33f70)

Breaking

  • in the config files, models must be specified by corresponding pytorchcv models, not torchvision. (bb5732d)

v2.7.3

14 Mar 16:54
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Performance

  • Speed up feature compilation (772a0bd)

v2.7.2

14 Mar 10:40
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Fix

  • Create feature directory if not exists (674c8c4)

v2.7.1

13 Mar 16:35
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Fix