diff --git a/docs/404.html b/docs/404.html index 94fc6af..c592cc2 100644 --- a/docs/404.html +++ b/docs/404.html @@ -71,7 +71,7 @@
diff --git a/docs/CODE_OF_CONDUCT.html b/docs/CODE_OF_CONDUCT.html index 7ff1421..ed72f6f 100644 --- a/docs/CODE_OF_CONDUCT.html +++ b/docs/CODE_OF_CONDUCT.html @@ -71,7 +71,7 @@ diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html index c270b34..472dfbe 100644 --- a/docs/LICENSE-text.html +++ b/docs/LICENSE-text.html @@ -71,7 +71,7 @@ diff --git a/docs/authors.html b/docs/authors.html index 9aa1dd1..4a9478f 100644 --- a/docs/authors.html +++ b/docs/authors.html @@ -71,7 +71,7 @@ diff --git a/docs/index.html b/docs/index.html index aee7278..cba1bf3 100644 --- a/docs/index.html +++ b/docs/index.html @@ -35,7 +35,7 @@ @@ -113,7 +113,7 @@Currently (as of December 2nd 2021), oncoPharmaDB
is built upon the following releases of external databases:
Currently (as of January 4th 2022), oncoPharmaDB
is built upon the following releases of external databases:
A list of two data frames:
druggable: data frame that indicates all drugs/compounds pr. target
actionable: data frame with actionable genes in cancer (biomarkers , +for therapies, prognosis etc. (harvested from various sources)
targets
+
+
+ druggable - A data frame with 1007 rows and 6 columns:
symbol - Gene symbol
ensembl_gene_id - Ensembl gene identifier
genename - Gene description
entrezgene - Gene identifier (Entrez)
nci_concept_display_name - Primary compound name (separated by '|')
molecule_chembl_id - ChEMBL compound identifier (separated by '|')
actionable - A data frame with 608 rows and 7 columns:
symbol - Gene symbol
ensembl_gene_id - Ensembl gene identifier
genename - Gene description
entrezgene - Gene identifier (Entrez)
phenotypes - List of associated phenotypes for actionable gene
clinical_significance - Clinical significance of biomarker (prognosis, drug sensitivity etc)
source_db - Underlying source database for actionability evidence