funcConnGUI/mainwindow.ui

<?xml version="1.0" encoding="UTF-8"?>
<ui version="4.0">
 <class>MainWindow</class>
 <widget class="QMainWindow" name="MainWindow">
  <property name="geometry">
   <rect>
    <x>0</x>
    <y>0</y>
    <width>723</width>
    <height>529</height>
   </rect>
  </property>
  <property name="windowTitle">
   <string>MainWindow</string>
  </property>
  <widget class="QWidget" name="centralWidget">
   <layout class="QGridLayout" name="gridLayout">
    <item row="0" column="0">
     <widget class="QTabWidget" name="tabWidget">
      <property name="maximumSize">
       <size>
        <width>750</width>
        <height>16777215</height>
       </size>
      </property>
      <property name="currentIndex">
       <number>0</number>
      </property>
      <widget class="QWidget" name="tab">
       <attribute name="title">
        <string>Input here</string>
       </attribute>
       <layout class="QVBoxLayout" name="verticalLayout">
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_19">
          <item>
           <widget class="QLabel" name="label_7">
            <property name="text">
             <string>Analysis Name</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_AnalysisName"/>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_ld_Analysis">
            <property name="text">
             <string>Load Analysis File (*.json)</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_8">
          <item>
           <widget class="QLabel" name="label_14">
            <property name="text">
             <string>Reference</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_Reference"/>
          </item>
          <item>
           <widget class="QCommandLinkButton" name="commandLinkButton_Reference">
            <property name="maximumSize">
             <size>
              <width>168</width>
              <height>16777215</height>
             </size>
            </property>
            <property name="text">
             <string/>
            </property>
            <property name="iconSize">
             <size>
              <width>20</width>
              <height>20</height>
             </size>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_7">
            <property name="text">
             <string>?</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <widget class="Line" name="line">
          <property name="orientation">
           <enum>Qt::Horizontal</enum>
          </property>
         </widget>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_3">
          <item>
           <widget class="QRadioButton" name="radioButton_Unprocessed">
            <property name="text">
             <string>Unprocessed</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QRadioButton" name="radioButton_PreprocwtFSL">
            <property name="text">
             <string>Preprocessed without FSL</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QRadioButton" name="radioButton_PreprocwFSL">
            <property name="text">
             <string>Preprocessed with FSL</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_4">
          <item>
           <widget class="QLabel" name="label_10">
            <property name="text">
             <string>Number of Groups</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QSpinBox" name="spinBox"/>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_chooseData">
            <property name="text">
             <string>Choose 4-D data</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_15">
            <property name="text">
             <string>?</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_10">
          <item>
           <widget class="QLabel" name="label_12">
            <property name="text">
             <string>Output Directory</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_OutDir"/>
          </item>
          <item>
           <widget class="QCommandLinkButton" name="commandLinkButton_OutDir">
            <property name="text">
             <string/>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_16">
            <property name="text">
             <string>?</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_11">
          <item>
           <widget class="QCheckBox" name="checkBox_preprocFeat">
            <property name="text">
             <string>Save preprocessed .feat</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QCheckBox" name="checkBox_ROICorrs">
            <property name="text">
             <string>Save 4-D ROI-wise correlations</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLabel" name="label_13">
            <property name="text">
             <string>Repetition Time (TR)</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_TR">
            <property name="text">
             <string>2</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_7">
          <item>
           <widget class="QLabel" name="label_8">
            <property name="text">
             <string>ROI File(numbered 1 to N)</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_ROIFile"/>
          </item>
          <item>
           <widget class="QCommandLinkButton" name="commandLinkButton_ROIFile">
            <property name="text">
             <string/>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="help_ROIFile">
            <property name="text">
             <string>?</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_15">
          <item>
           <widget class="QLabel" name="label_18">
            <property name="text">
             <string>FSL Directory</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_FSLDIR"/>
          </item>
          <item>
           <widget class="QCommandLinkButton" name="commandLinkButton_FSLDIR">
            <property name="text">
             <string/>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_14">
            <property name="text">
             <string>?</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <widget class="QLabel" name="label_9">
          <property name="text">
           <string>-----------------------------------------------------------------Optional Files--------------------------------------------------------------------</string>
          </property>
         </widget>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_14">
          <item>
           <widget class="QLabel" name="label_17">
            <property name="text">
             <string>Mask for Brain</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_Mask"/>
          </item>
          <item>
           <widget class="QCommandLinkButton" name="commandLinkButton_Mask">
            <property name="text">
             <string/>
            </property>
           </widget>
          </item>
          <item>
           <layout class="QHBoxLayout" name="horizontalLayout_18">
            <item>
             <widget class="QLabel" name="label_19">
              <property name="text">
               <string>Number of Threads</string>
              </property>
             </widget>
            </item>
            <item>
             <widget class="QSpinBox" name="spinBox_threads"/>
            </item>
           </layout>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_9">
          <item>
           <widget class="QCheckBox" name="checkBox">
            <property name="text">
             <string/>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLabel" name="label_16">
            <property name="text">
             <string>Correlations File </string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QLineEdit" name="lineEdit_CorrFile"/>
          </item>
          <item>
           <widget class="QCommandLinkButton" name="commandLinkButton_CorrFile">
            <property name="text">
             <string/>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_18">
            <property name="text">
             <string>?</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item>
         <layout class="QHBoxLayout" name="horizontalLayout_5">
          <item>
           <widget class="QPushButton" name="pushButton_Save1">
            <property name="text">
             <string>Save</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_Go">
            <property name="text">
             <string>Go</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_2">
            <property name="text">
             <string>Clear</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QPushButton" name="pushButton_3">
            <property name="text">
             <string>Exit</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
       </layout>
      </widget>
      <widget class="QWidget" name="tab_2">
       <attribute name="title">
        <string>Preprocessing</string>
       </attribute>
       <layout class="QFormLayout" name="formLayout_2">
        <item row="0" column="0">
         <layout class="QHBoxLayout" name="horizontalLayout_13">
          <item>
           <widget class="QLabel" name="label_3">
            <property name="text">
             <string>Motion Correction</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QComboBox" name="comboBox_MCorrect">
            <item>
             <property name="text">
              <string>None</string>
             </property>
            </item>
            <item>
             <property name="text">
              <string>MCFLIRT</string>
             </property>
            </item>
           </widget>
          </item>
         </layout>
        </item>
        <item row="1" column="0">
         <widget class="QCheckBox" name="checkBox_B0">
          <property name="text">
           <string>B0 unwarping</string>
          </property>
         </widget>
        </item>
        <item row="2" column="0">
         <layout class="QHBoxLayout" name="horizontalLayout_16">
          <item>
           <widget class="QLabel" name="label_4">
            <property name="text">
             <string>Slice Time Correction</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QComboBox" name="comboBox_STimeCorrect">
            <item>
             <property name="text">
              <string>None</string>
             </property>
            </item>
            <item>
             <property name="text">
              <string>Regular up (0,1,2,.....n-1)</string>
             </property>
            </item>
            <item>
             <property name="text">
              <string>Regular down (n-1,n-2,.....,1,0)</string>
             </property>
            </item>
            <item>
             <property name="text">
              <string>Interleaved (0,2,4,....,1,3,5,.....)</string>
             </property>
            </item>
            <item>
             <property name="text">
              <string>Use Slice Order File</string>
             </property>
            </item>
            <item>
             <property name="text">
              <string>Use Slice Timings File</string>
             </property>
            </item>
           </widget>
          </item>
         </layout>
        </item>
        <item row="3" column="1">
         <layout class="QFormLayout" name="formLayout">
          <item row="2" column="1">
           <widget class="QLineEdit" name="lineEdit_highpass">
            <property name="text">
             <string>1</string>
            </property>
           </widget>
          </item>
          <item row="1" column="1">
           <widget class="QCheckBox" name="checkBox_HighPass">
            <property name="text">
             <string>High Pass (in s)</string>
            </property>
           </widget>
          </item>
          <item row="0" column="1">
           <widget class="QLabel" name="label_6">
            <property name="text">
             <string>Temporal Filtering</string>
            </property>
           </widget>
          </item>
          <item row="6" column="1">
           <widget class="QLineEdit" name="lineEdit_lowpass">
            <property name="text">
             <string>1</string>
            </property>
           </widget>
          </item>
          <item row="5" column="1">
           <widget class="QCheckBox" name="checkBox_LowPass">
            <property name="text">
             <string>Low Pass (in s)</string>
            </property>
           </widget>
          </item>
         </layout>
        </item>
        <item row="4" column="0">
         <layout class="QVBoxLayout" name="verticalLayout_2">
          <item>
           <widget class="QCheckBox" name="checkBox_BET">
            <property name="text">
             <string>BET Brain Extraction</string>
            </property>
           </widget>
          </item>
          <item>
           <layout class="QHBoxLayout" name="horizontalLayout_6">
            <item>
             <widget class="QLabel" name="label_BET_Correct">
              <property name="text">
               <string>BET Correction Value</string>
              </property>
             </widget>
            </item>
            <item>
             <widget class="QLineEdit" name="lineEdit_BET_correct_value">
              <property name="text">
               <string>0.3</string>
              </property>
             </widget>
            </item>
            <item>
             <widget class="QCheckBox" name="checkBox_RobustBET">
              <property name="text">
               <string>RobustBET</string>
              </property>
             </widget>
            </item>
           </layout>
          </item>
         </layout>
        </item>
        <item row="5" column="0">
         <layout class="QHBoxLayout" name="horizontalLayout_17">
          <item>
           <widget class="QLabel" name="label_5">
            <property name="text">
             <string>Spatial Sothing FWHM(mm)</string>
            </property>
           </widget>
          </item>
          <item>
           <widget class="QDoubleSpinBox" name="doubleSpinBox_FWHM"/>
          </item>
         </layout>
        </item>
        <item row="6" column="0">
         <widget class="QCheckBox" name="checkBox_IntensityNorm">
          <property name="text">
           <string>Intensity Normalization</string>
          </property>
         </widget>
        </item>
        <item row="7" column="0">
         <widget class="QCheckBox" name="checkBox_MelodicICA">
          <property name="text">
           <string>Melodic ICA data exploration</string>
          </property>
         </widget>
        </item>
        <item row="8" column="0">
         <widget class="QCheckBox" name="checkBox_GSR">
          <property name="text">
           <string>Apply Global Signal Regression (GSR)</string>
          </property>
         </widget>
        </item>
       </layout>
      </widget>
      <widget class="QWidget" name="tab_4">
       <attribute name="title">
        <string>Registration | Correlations</string>
       </attribute>
       <widget class="QWidget" name="layoutWidget_2">
        <property name="geometry">
         <rect>
          <x>34</x>
          <y>71</y>
          <width>591</width>
          <height>51</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_2">
         <item>
          <widget class="QLabel" name="label_2">
           <property name="text">
            <string>Registration</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_reg_y">
           <property name="text">
            <string>Yes</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_reg_n">
           <property name="text">
            <string>No</string>
           </property>
          </widget>
         </item>
        </layout>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>30</x>
          <y>210</y>
          <width>466</width>
          <height>22</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_25">
         <item>
          <widget class="QRadioButton" name="radioButton_Ank_Corr">
           <property name="text">
            <string>Use Ankita's Correlation Function</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_Dep_Cor">
           <property name="text">
            <string>Use Deepak's Correlation Function</string>
           </property>
          </widget>
         </item>
        </layout>
       </widget>
       <widget class="QCheckBox" name="checkBox_GSR_2">
        <property name="geometry">
         <rect>
          <x>30</x>
          <y>130</y>
          <width>251</width>
          <height>20</height>
         </rect>
        </property>
        <property name="text">
         <string>Apply Global Signal Regression (GSR)</string>
        </property>
       </widget>
       <widget class="QCheckBox" name="checkBox_doStats">
        <property name="geometry">
         <rect>
          <x>30</x>
          <y>250</y>
          <width>111</width>
          <height>20</height>
         </rect>
        </property>
        <property name="text">
         <string>Do Statistics</string>
        </property>
       </widget>
      </widget>
      <widget class="QWidget" name="tab_3">
       <attribute name="title">
        <string>Statistics</string>
       </attribute>
       <widget class="QLabel" name="label_15">
        <property name="geometry">
         <rect>
          <x>10</x>
          <y>230</y>
          <width>645</width>
          <height>16</height>
         </rect>
        </property>
        <property name="text">
         <string>--------------------------------------------------------------------Optional Files--------------------------------------------------------------</string>
        </property>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>9</x>
          <y>274</y>
          <width>581</width>
          <height>70</height>
         </rect>
        </property>
        <layout class="QVBoxLayout" name="verticalLayout_4">
         <item>
          <layout class="QHBoxLayout" name="horizontalLayout_12">
           <item>
            <widget class="QPushButton" name="pushButton_Save">
             <property name="text">
              <string>Save</string>
             </property>
            </widget>
           </item>
           <item>
            <widget class="QPushButton" name="pushButton_Go3">
             <property name="text">
              <string>Go</string>
             </property>
            </widget>
           </item>
           <item>
            <widget class="QPushButton" name="pushButton_10">
             <property name="text">
              <string>Clear</string>
             </property>
            </widget>
           </item>
           <item>
            <widget class="QPushButton" name="pushButton_12">
             <property name="text">
              <string>Exit</string>
             </property>
            </widget>
           </item>
           <item>
            <widget class="QPushButton" name="pushButton_13">
             <property name="text">
              <string>?</string>
             </property>
            </widget>
           </item>
          </layout>
         </item>
        </layout>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>10</x>
          <y>140</y>
          <width>386</width>
          <height>22</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_20">
         <item>
          <widget class="QLabel" name="label_11">
           <property name="text">
            <string>Normalization Method</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_MaxMinFischer">
           <property name="text">
            <string>Max-Min Fischer</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_NormFischer">
           <property name="text">
            <string>Normal Fischer</string>
           </property>
          </widget>
         </item>
        </layout>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>10</x>
          <y>10</y>
          <width>283</width>
          <height>24</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_21">
         <item>
          <widget class="QLabel" name="label">
           <property name="text">
            <string>Statistical test Types</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QComboBox" name="comboBox_StatType">
           <item>
            <property name="text">
             <string>T-test</string>
            </property>
           </item>
           <item>
            <property name="text">
             <string>Paired T-test</string>
            </property>
           </item>
           <item>
            <property name="text">
             <string>Non-Parametric test</string>
            </property>
           </item>
          </widget>
         </item>
        </layout>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>12</x>
          <y>49</y>
          <width>371</width>
          <height>22</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout"/>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>410</x>
          <y>40</y>
          <width>227</width>
          <height>38</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_22">
         <item>
          <widget class="QCheckBox" name="checkBox_AllCombs">
           <property name="text">
            <string>All</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QCommandLinkButton" name="chooseCombsButton">
           <property name="text">
            <string>Choose Combinations</string>
           </property>
          </widget>
         </item>
        </layout>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>10</x>
          <y>90</y>
          <width>371</width>
          <height>22</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_23">
         <item>
          <widget class="QLabel" name="label_Hypothesis">
           <property name="text">
            <string>Hypothesis</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_G1_gr_G2">
           <property name="text">
            <string>G1&gt;=G2</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_G2_gr_G1">
           <property name="text">
            <string>G2&gt;G1</string>
           </property>
          </widget>
         </item>
        </layout>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>10</x>
          <y>180</y>
          <width>406</width>
          <height>22</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_24">
         <item>
          <widget class="QRadioButton" name="radioButton_JointFDR">
           <property name="text">
            <string>Joint FDR Correction</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QRadioButton" name="radioButton_SepFDRcorrect">
           <property name="text">
            <string>Separate FDR correction for each ROI</string>
           </property>
          </widget>
         </item>
        </layout>
       </widget>
       <widget class="QWidget" name="layoutWidget">
        <property name="geometry">
         <rect>
          <x>10</x>
          <y>70</y>
          <width>371</width>
          <height>22</height>
         </rect>
        </property>
        <layout class="QHBoxLayout" name="horizontalLayout_26">
         <item>
          <widget class="QCheckBox" name="checkBox_wt_groups">
           <property name="text">
            <string>Within Groups</string>
           </property>
          </widget>
         </item>
         <item>
          <widget class="QCheckBox" name="checkBox_bw_groups">
           <property name="text">
            <string>Between Groups</string>
           </property>
          </widget>
         </item>
        </layout>
       </widget>
       <zorder>layoutWidget</zorder>
       <zorder>layoutWidget</zorder>
       <zorder>layoutWidget</zorder>
       <zorder>layoutWidget</zorder>
       <zorder>layoutWidget</zorder>
       <zorder>layoutWidget</zorder>
       <zorder>layoutWidget</zorder>
       <zorder>layoutWidget</zorder>
       <zorder>label_15</zorder>
      </widget>
     </widget>
    </item>
   </layout>
  </widget>
  <widget class="QToolBar" name="mainToolBar">
   <attribute name="toolBarArea">
    <enum>TopToolBarArea</enum>
   </attribute>
   <attribute name="toolBarBreak">
    <bool>false</bool>
   </attribute>
  </widget>
  <widget class="QStatusBar" name="statusBar"/>
 </widget>
 <layoutdefault spacing="6" margin="11"/>
 <resources/>
 <connections/>
</ui>