astral.20.503.log

================== ASTRAL ===================== 

This is ASTRAL version 5.0.3
Gene trees are treated as unrooted
410 trees read from Best.20
All output trees will be *arbitrarily* rooted at TVSH

======== Running the main analysis
Number of taxa: 1178 (1178 species)
Taxa: [TVSH, KEGA, SUAK, JTQQ, VLNB, SLYR, ZSSR, CMFF, JETM, RKFX, RKLL, UDUT, KVAY, RBYC, IANR, SQCF, XFFT, Prupe_v1.0, EAVM, VCIN, WVEF, EILE, WKCY, EDHN, XVJB, KYAD, BJSW, AQGE, PKMO, WMUK, KPTE, ATFX, Theca_v1.1, OLXF, OCTM, PUDI, AWJM, XMQO, LNER, LWDA, SVVG, YZVJ, HENI, UZWG, NHUA, INSP, TJLC, UVDC, RJIM, QICX, IKFD, BCAA, YUOM, FCCA, VFFP, WAXR, HBHB, OBTI, HDWF, SWPE, UAXP, QSKP, LVUS, UPZX, VDKG, LAPO, TZWR, Arath_TAIR10, CSUV, VMNH, RTTY, CRNC, DZTK, CZPV, Carpa_ASGPBv0.4, MYZV, JHCN, THHD, TIUZ, RHAU, PXYR, PAZJ, VVPY, XNLP, Manes_v4.1, OQHZ, EZZT, SIZE, COAQ, Poptr_v3.0, IEPQ, LFOG, INQX, TDTF, KKDQ, GLVK, RPPC, ZTLR, ZBVT, HBUQ, BNDE, FWCQ, NJLF, LPGY, YGAT, CKDK, XPBC, VNMY, TXMP, VXOD, KCPT, HNCF, MYVH, BHYC, BVOF, AEPI, POZS, OODC, IHCQ, SWGX, WWQZ, Eucgr_v1.1, NEBM, FGDU, RJNQ, YNUE, SJAN, JKNQ, AXNH, PMTB, UJGI, TLCA, ROLB, ARYD, IMZV, IDAU, ZINQ, FEDW, BZDF, HKMQ, DZLN, GVCB, KBRW, EQYT, YHLF, UWFU, Vitvi_Genoscope.12X, SZPD, BGZG, NNGU, VKJD, PTFA, ODDO, DAAD, OXYP, BEFC, WRPP, ADHK, AVJK, LRTN, SERM, WXVX, PPPZ, UFHF, KVFU, QAUE, HUSX, NGRR, JPDJ, YSRZ, FNEN, BNTL, JEXA, QZZU, YQIJ, SMUR, HANM, DIHD, XVRU, NIGS, OEKO, MZOB, IDGE, OUER, MDJK, ABEH, JWEY, EMAL, DKFZ, AHRN, CPOC, ALUC, EMBR, IZNU, NAUM, OQBM, XQRV, QSLH, NHAG, VXKB, BOLZ, Solly_iTAGv2.3, NMDZ, GHLP, LQJY, OSMU, LWCK, AIOU, MKZR, WQRD, ZSGF, KTWL, PCNH, KPUM, ECTD, EDEQ, JGYZ, YADI, DSUV, JCLQ, YFQX, UOYN, QEHE, MGVU, GGJD, TORX, MZLD, KTAR, DCCI, RWKR, DTNC, CLRW, FAMO, VYDM, FROP, OWAS, EJCM, PHCE, IYDF, WHNV, XMBA, TAGM, FDMM, BAHE, EQDA, PUCW, FUMQ, FYUH, GETL, GNPX, RTNA, ATYL, EAAA, SNNC, DMLT, UCNM, Mimgu_v2.0, ZRIN, UTQR, PSHB, MQIV, GCFE, TKEK, NBMW, AYIY, PCGJ, HRUR, MXFG, JCMU, UMUL, WOHL, EDXZ, COBX, PTBJ, YKZB, GNRI, YRHD, XXYA, SIBR, GRFT, XRLM, EJBY, GDZS, DFYF, ASMV, SXML, QACK, CAQZ, GSZA, JTRM, FFFY, AUIP, FXGI, CFRN, EYKJ, DDRL, KFZY, KGJF, FUPX, JNKW, DESP, MHYG, XRCX, TEZA, DUQG, OAGK, GUMF, BMSE, BIDT, NVSO, ZCUA, JEPE, QXWF, HXCD, JYMN, UYED, AQZD, YRBQ, LYPZ, UBLN, DUNJ, HUQC, TPEM, IHPC, IZLO, ZJRC, HLJG, AJFN, CWYJ, TQKZ, WEQK, NTEO, SALZ, SUVN, EDBB, OINM, QIKZ, MVSE, CLNU, CLMX, SBZH, ZETY, QURC, GIPR, SZUO, BFJL, FWBF, VUSY, VTLJ, MTII, FAKD, VQFW, GRRW, RQUG, SIIK, AALA, COCP, BYQM, MFIN, YMES, Spipo_v2, JSAG, XZME, LELS, VTUS, MTHW, THDM, KYNE, EMJJ, FCEL, BLAJ, JHUL, WTDE, JVBR, LTZF, MUMD, PRFO, DMIN, LDME, JDTY, DPFW, KXSK, PLBZ, ICNN, CMCY, MVRF, RQZP, UZXL, HOKG, XFJG, RCUX, LSJW, FGRF, IXEM, ONBE, SVTS, GJPF, SART, RDYY, YJUG, AFLV, OOSO, MWYQ, GDKK, QNPH, THEW, UOEL, XHHU, LSKK, JNUB, TZNS, LEMW, BDJQ, Musac_v1.0, HWUP, HXJE, Elagu_v2.0, BYPY, PPQR, CIEA, PWSG, XPAF, WBIB, IADP, RMVB, YXNR, EFCZ, RCAH, SOHV, WCOR, XBKS, ZMGN, BPKH, XUAB, NNOK, BXAY, VQYB, ZENX, YPIC, ROEI, Sorbi_v2.1, HATH, Orysa_v7.0, BSTR, QOXT, SILJ, DGXS, OCWZ, VVVV, PAWA, DHPO, PSJT, YZRI, WBOD, XQWC, OBPL, VYLQ, MAQO, WAIL, ABSS, BSVG, KRJP, FALI, WPHN, QDVW, WZFE, SJEV, WKSU, VZCI, FZJL, URDJ, Ambtr_v1.0.27, PZRT, MEKP, QIAD, PBUU, VVRN, PIVW, WQML, UJTT, FLTD, POPJ, NDUV, XDDT, YCKE, ZXJO, DCDT, BMJR, WCLG, HTFH, OCZL, YOWV, XXHP, UFJN, NWWI, ZQYU, UJWU, YLJA, CJNT, GYFU, ORJE, KJZG, BMIF, FQGQ, WGTU, CVEG, YIXP, NOKI, KIIX, UWOD, PNZO, EWXK, UOMY, RFMZ, VIBO, QVMR, ALVQ, DJSE, EEAQ, DFHO, FFGR, QPDY, VQBJ, Klefl_v1.0, FQLP, FPCO, BFIK, Chabr_v0.1, TPHT, HKZW, ZRMT, NBYP, MFZO, JOJQ, WSJO, WDCW, YOXI, VAZE, RPGL, RPQV, STKJ, DFDS, QWFV, GGWH, MNNM, GYRP, WCQU, BHBK, WDGV, RPRU, GBGT, MOYY, RQFE, YSQT, DRFX, AEKF, BAJW, VJED, RFAD, LLEN, NMAK, POOW, QFND, JKHA, PQED, IJMT, WCZB, NPRL, OQWW, UYFR, SNOX, XMCL, KYIO, XRTZ, ROZZ, NNHQ, WCLV, AZZW, JQFK, LLXJ, RSOF, JJZR, CKXF, SBLT, WEJN, UGPM, BWVJ, IHJY, JEBK, IEHF, IKWM, LJPN, VNAL, PWKQ, FTRP, XAXW, PYDB, IKIZ, ZJOJ, URSB, VZWX, ZULJ, RTLC, PVGP, OBUY, YSBD, APTP, FSQE, VRGZ, FOMH, HFIK, JGGD, VYER, YRMA, RWXW, QLMZ, ULXR, ASZK, VHIJ, HYHN, XJGM, JMTE, XOAL, Ostlu_v2.0, Micpu_v3.0, KADG, Cyame_v1.0, RRSV, PUAN, AJAU, OAEZ, CQQP, OQON, LSHT, NQYP, GJIY, JIWJ, KSFK, TNAW, XIVI, ISIM, MMKU, FMVB, HVNO, DUMA, NKXU, EATP, ZNUM, GXBM, MFYC, BILC, Chlva_v1.0, EEJO, AKCR, MNCB, BAZF, BOGT, VFIV, JMUI, RAWF, FOYQ, GYBH, QWRA, XKWQ, VJDZ, FXHG, DVYE, VIAU, BZSH, DZPJ, MWAN, PZIF, XDLL, AOUJ, LBRP, AJUW, VALZ, MULF, JRGZ, TSBQ, ZIVZ, LNIL, ISPU, JWGT, WRSL, Volca_v2.0, Chlre_v5.5, JKKI, KFEB, GUBD, PRIQ, QRTH, ZLQE, UKUC, WDWX, SYJM, ZFXU, AYPS, ALZF, NSTT, PKOX, ZFGK, JKAA, ZYCD, KJYC, LGDQ, ABIJ, Selmo_v1.0, ZZOL, UPMJ, WAFT, ENQF, PQTO, XNXF, ZZEI, CBAE, YHZW, GKAG, WOGB, SZYG, ZTHV, HVBQ, HRWG, XWHK, JMXW, BGXB, YWNF, WNGH, JADL, TAVP, EEMJ, MIRS, LNSF, QKQO, WSPM, DHWX, IGUH, ZACW, VBMM, QMWB, TMAJ, CMEQ, ORKS, BPSG, FFPD, GRKU, NGTD, VMXJ, RGKI, ABCD, RDOO, YEPO, Phypa_v3.0, KEFD, AWOI, GOWD, RCBT, UHLI, SKQD, BSNI, TWUW, UCRN, TCBC, DXOU, AKXB, FAJB, WEEQ, YFGP, LGOW, RTMU, YBQN, IRBN, OFTV, KRUQ, UUHD, TGKW, BNCU, NRWZ, PIUF, JHFI, ILBQ, WJLO, TFYI, JPYU, HMHL, HERT, TXVB, KUXM, JVSZ, TOXE, WVWN, IOVS, AWQB, IIOL, DZQM, JBND, MFTM, GGEA, VSRH, GAMH, AQFM, YFZK, QSNJ, QFAE, NRXL, XIRK, OXGJ, GMHZ, FHST, RMMV, JDQB, IFLI, AUDE, GKCZ, ETCJ, YYPE, UEVI, CGDN, XMGP, QNGJ, FRPM, XQSG, AIGO, BUWV, VFYZ, NKIN, ZQVF, EFMS, HQOM, IAJW, NVGZ, ZYAX, WWSS, BTTS, YLPM, EGLZ, JZVE, OWFC, KLGF, JRNA, ZQWM, CDFR, BBDD, MHGD, HILW, QCGM, SCEB, UUJS, XLGK, VGSX, FMWZ, ROWR, QHBI, IZGN, XTZO, RSCE, MIXZ, ACWS, MUNP, XSZI, CSSK, OPDF, QTJY, IWMW, UPOG, ZUHO, GBVZ, Aquco_v1.1, VGHH, WFBF, YHFG, CCID, NMGG, AUGV, ZGQD, UDHA, IRAF, SSDU, BEKN, RQNK, QCOU, EVOD, XHKT, XMVD, QUTB, HAEU, HQRJ, NUZN, FYTP, HTIP, ZHMB, VYGG, PTLU, YGCX, QKMG, XGFU, RSPO, BSEY, IUSR, TOKV, KWGC, DRIL, ZJUL, EHNF, OOVX, YKFU, FCBJ, CKKR, UHBY, DAYQ, RUUB, CVDF, WQUF, RNBN, KJAA, NXTS, YNFJ, CTYH, LKKX, BYNZ, KDCH, UQCB, EZGR, LLQV, LDEL, CPLT, IWIS, CPKP, BJKT, OMYK, BERS, GJNX, HZTS, EDIT, GIWN, AZBL, SFKQ, JAFJ, JGAB, ZBTA, VJPU, DVXD, EGOS, MRKX, BKQU, RXEN, FZQN, OLES, SKNL, SHEZ, SMMC, AAXJ, ONLQ, CBJR, WGET, FVXD, WMLW, XSSD, EYRD, OHKC, BWRK, ZBPY, PDQH, HDSY, CUTE, FYSJ, WOBD, OHAE, VHZV, GEHT, QZXQ, ZCDJ, PJSX, KZED, KNMB, HJMP, MYMP, Phavu_v1.0, CJGZ, CWZU, DXQW, VGVI, IXVJ, RFSD, HGSM, LRRR, WEAC, XAYK, JNVS, Betvu_v1.1, SCAO, Nelnu_v1.0, GTHK, XZUY, GNQG, KAWQ, UGNK, MTGC, VITX, YQEC, YJJY, HNDZ, LHLE, HEGQ, IXLH, SKYV, GSXD, CQPW, PYHZ, ANON, ZQRI, TGNL, GFUR, ZDIZ, SDPC, JTIG, FIKG, LIRF, FIDQ, JCXF, MCPK, EBWI, ISHC, HAOX, WZYK, HPXA, TRRQ, HYZL, HABV, NFXV, RVGH, ZPKK, TJQY, ACFP, TTRG, PEZP, ZSAB, WYIG, ZIWB, RZTJ, OSIP, AYMT, QIEH, SXCE, QNOC, AXAF, NWMY, WTKZ, VDAO, Pinta_v2.0, AREG, JUWL, OVIJ, SGTW, BEGM, GANB, RFRB, JBLI, MROH, URCP, AFPO, FCHS, RICC, PSKY, CAPN, DRGY, MCHJ, HIDG, KEYW, BTFM, EGNB, IRZA, VKVG, RAPY, NATT, YDCQ, VBLH, MXDS, UTRE, IHOI, KUJU, IRYH, RNAT, RYJX, RHVC, OFUE, ENAU, PFUD, XTON, OTQG, ISGT, LETF, QYXY, ULKT, OSHQ, KOFB, TCYS, NHIX, YLWW, BRUD, VBHQ, BCGB, WIGA, SWOH, WWKL, CIAC, ERIA, OMDH, YKQR, DOVJ, AFQQ, UHJR, JSZD, NPND, XISJ, DLJZ, DLAI, UGJI, ERWT, GCYL, TJES, IPWB, XKPS, NXOH, AJJE, BXBF, TVCU, ZHEE, CQMG, AXBO, YBML, WXNT, NSPR, WLIC, GAON, SYHW, SLOI, CTSS, JLOV, DWZT, AXPJ, DHAW, BLVL, NCVK, KAYP, LXRN, NHCM, KMNX, BAKF, IAYV, SRSQ, WXRI, ETGN, ACRY, BCYF, USIX, QXSZ, HHXJ, CBNG, LDRY, MWXT, KBXS, ZKPF, HBGV, GIOY, BBBA, JOIS, GTSV, LJQF, MFEA, YZGX, XOOE, RMWJ, DBYD, WVMY, RUIF, CNTZ, UVQL]
Taxon occupancy: {POOW=203, SVTS=232, KSFK=242, EBWI=116, AIOU=374, XFFT=310, KUJU=241, JRGZ=159, PQTO=358, JAFJ=372, RQNK=373, POPJ=366, UZWG=386, WKSU=356, OCZL=327, RWXW=205, RSPO=325, SIZE=369, AVJK=324, UGPM=147, YGCX=305, CVDF=383, SERM=271, GKAG=351, AXNH=377, WTDE=331, RUUB=331, PBUU=287, HNDZ=321, NQYP=202, OWAS=326, EZGR=355, TWUW=276, TMAJ=371, CVEG=331, DAYQ=386, XNXF=304, WXNT=303, JEPE=366, LIRF=185, ROLB=369, XDDT=367, HANM=282, GMHZ=392, MFIN=356, ATFX=373, UVQL=110, JCLQ=384, YOWV=342, BBBA=217, AEKF=192, ZHEE=272, NEBM=376, VQBJ=284, XWHK=302, MYMP=369, JPDJ=372, AXPJ=178, JIWJ=280, XHKT=347, UZXL=304, Manes_v4.1=372, ACFP=233, SVVG=375, QRTH=214, BFIK=330, SALZ=380, GKCZ=369, BYNZ=271, LGOW=354, OWFC=377, XFJG=323, PZIF=261, JCMU=366, Sorbi_v2.1=392, HAOX=181, QAUE=371, KJYC=299, AKXB=303, TQKZ=371, ISPU=249, AREG=318, DFDS=234, JVSZ=335, QNOC=229, BFJL=387, YKQR=322, VBHQ=289, NVGZ=393, BLVL=156, VDKG=345, CZPV=397, IUSR=320, BYQM=381, YOXI=328, BJSW=382, WEJN=139, QHBI=350, BYPY=304, LEMW=355, TDTF=355, JTQQ=382, NTEO=334, OHKC=335, JETM=369, JRNA=370, BSEY=362, SRSQ=167, QFAE=285, GXBM=287, FWCQ=313, BBDD=354, SJAN=283, LELS=382, WVMY=216, VQFW=339, ZNUM=276, EQYT=341, UCNM=387, LXRN=99, ZLQE=228, RKFX=337, KJZG=345, EEAQ=368, WXRI=190, RICC=321, QNPH=334, FWBF=336, RDYY=299, GDZS=369, PKMO=256, GSXD=350, GBVZ=353, VBLH=149, YRBQ=367, PKOX=381, TOKV=349, RMMV=387, AEPI=368, KOFB=344, ODDO=390, Aquco_v1.1=389, Solly_iTAGv2.3=384, HRUR=316, MULF=214, NXOH=312, YXNR=354, HATH=348, PMTB=386, BDJQ=345, DFHO=371, MUMD=357, RBYC=350, WZYK=318, ZJOJ=157, WTKZ=228, Carpa_ASGPBv0.4=369, TFYI=270, UTQR=385, JTRM=382, AZZW=317, QLMZ=191, WAFT=332, ZSAB=316, YZRI=380, GSZA=347, UTRE=257, OUER=332, SART=360, RQUG=378, ZFGK=340, Volca_v2.0=315, MDJK=322, JGYZ=375, EILE=381, WEQK=373, IKFD=385, WAIL=374, XDLL=206, JEXA=356, VHZV=375, CKXF=140, RXEN=351, PVGP=94, WXVX=355, ZJRC=389, XOAL=238, VUSY=387, MUNP=346, QWFV=244, BWRK=374, LPGY=340, POZS=355, GGEA=294, NKXU=276, RKLL=361, UPMJ=324, HLJG=381, VBMM=371, UEVI=358, CCID=380, PTBJ=357, ZHMB=361, Cyame_v1.0=166, UCRN=268, SJEV=374, WCLG=326, SNNC=358, ETCJ=376, DJSE=324, WGTU=365, MYVH=346, TKEK=352, HRWG=359, WCLV=286, Nelnu_v1.0=359, WCOR=356, OQBM=352, LETF=250, LVUS=342, AALA=281, FFGR=265, URSB=146, LNER=340, EGLZ=352, JNKW=363, YKZB=342, RQZP=332, GOWD=311, UPOG=363, FLTD=323, PTFA=384, VSRH=387, EAAA=369, NGRR=366, SNOX=271, DHPO=379, YADI=363, ZUHO=367, Pinta_v2.0=122, OLXF=334, GVCB=359, FFFY=339, WPHN=339, YZVJ=268, DUMA=304, EEJO=284, JCXF=192, OSHQ=340, MYZV=374, MHYG=393, YCKE=318, NGTD=350, KKDQ=370, BHYC=367, WNGH=364, HPXA=330, SYHW=281, ZULJ=76, Phypa_v3.0=341, BSNI=281, SLOI=146, BWVJ=126, WCQU=300, XMBA=191, WVWN=373, BOGT=189, PZRT=299, SHEZ=124, ZJUL=337, NXTS=323, IKIZ=139, ZSGF=386, ZDIZ=267, MQIV=382, HYHN=155, MFTM=387, EGNB=157, ETGN=144, ACRY=151, KFZY=344, VFYZ=330, IZGN=343, XBKS=365, YRHD=388, KUXM=282, ROWR=357, KBRW=318, NVSO=355, RMVB=221, VZCI=382, MWXT=168, AJAU=260, RVGH=386, HJMP=382, LNIL=148, LLEN=133, JHCN=335, UHBY=363, SYJM=275, VIAU=239, UJGI=377, LAPO=283, ROZZ=119, EEMJ=315, YIXP=332, YEPO=356, TORX=353, EGOS=375, SUAK=382, DUNJ=353, OSIP=260, WRPP=381, PCGJ=379, IXEM=329, XMCL=234, GGJD=337, RCAH=314, IOVS=342, YRMA=201, GIPR=299, DHWX=315, DUQG=360, MFYC=208, FYSJ=291, GEHT=355, Prupe_v1.0=395, OQHZ=343, TVCU=240, IZLO=379, UYFR=86, YPIC=344, WRSL=281, PIVW=366, ACWS=358, UYED=340, RCBT=355, LRRR=366, MWYQ=334, EVOD=370, ULKT=278, VIBO=372, RMWJ=109, BUWV=371, KZED=243, GIOY=159, PRFO=292, PIUF=352, SWGX=324, RGKI=343, OODC=256, CRNC=339, HFIK=198, FHST=367, OFUE=182, BOLZ=358, VKJD=394, FYUH=309, WLIC=310, NNGU=340, JLOV=91, CPKP=343, CTSS=188, EZZT=350, PRIQ=253, TOXE=359, KMNX=136, BSTR=357, GTHK=344, FUMQ=346, FFPD=340, LTZF=342, ATYL=366, RZTJ=326, VMNH=335, IZNU=318, UAXP=378, LRTN=259, JHFI=344, DDRL=363, XSSD=388, ERIA=291, PTLU=346, OSMU=361, MFZO=349, CPLT=311, QFND=141, FYTP=341, AJFN=374, YNFJ=330, KBXS=276, BMIF=346, XMGP=303, GCFE=365, OFTV=320, ENAU=114, KVAY=334, JPYU=322, CAPN=243, BZDF=375, OMDH=335, PCNH=377, IXLH=352, BMJR=351, ANON=209, XQRV=374, FQGQ=311, UWFU=353, TCBC=313, SSDU=380, GRFT=356, JWGT=248, WCZB=294, NPND=166, BSVG=372, IIOL=378, SFKQ=358, ARYD=363, JWEY=322, TZNS=362, NNHQ=200, JNUB=326, QWRA=211, APTP=200, FDMM=315, Chlre_v5.5=354, TXMP=344, ZFXU=258, PXYR=342, BXBF=235, BIDT=363, AAXJ=386, JSAG=313, NCVK=223, QYXY=297, LWCK=374, DFYF=363, BXAY=353, JYMN=338, SLYR=357, IRBN=368, CAQZ=316, GIWN=357, ZBPY=344, SWOH=258, CPOC=326, RTLC=140, QSKP=353, JNVS=359, XQSG=378, XOOE=149, OBPL=384, VQYB=358, IRAF=380, DWZT=119, KIIX=353, MMKU=333, Chlva_v1.0=315, FUPX=348, QSLH=363, IEHF=131, TGKW=294, AJJE=245, UHJR=200, UPZX=343, IMZV=370, XSZI=357, NHAG=326, HBGV=175, RNAT=247, RTMU=275, DMIN=365, DSUV=351, RTNA=368, HBHB=305, TGNL=207, NATT=105, NPRL=257, KVFU=375, VGHH=379, IKWM=140, MXDS=248, CTYH=314, OQON=228, SQCF=322, UFHF=361, LWDA=377, WAXR=350, ZMGN=366, PLBZ=355, ZSSR=384, QURC=313, AYIY=353, LNSF=337, UHLI=351, QSNJ=388, KTAR=361, WFBF=336, SWPE=349, FSQE=167, NHCM=226, NRWZ=324, ZQRI=350, RPGL=272, CJGZ=339, IADP=236, LLQV=332, MXFG=337, Ambtr_v1.0.27=397, GGWH=285, OBUY=118, KEGA=358, EJBY=338, NRXL=383, YLJA=364, WYIG=313, AUDE=370, OBTI=379, XQWC=373, ECTD=359, FQLP=220, RNBN=339, NAUM=343, VXKB=355, UFJN=376, GRKU=313, QUTB=384, NNOK=369, DKFZ=316, KGJF=350, KEFD=344, UUHD=325, ZBTA=379, WJLO=342, MZLD=370, VMXJ=368, AYMT=275, BMSE=347, TZWR=351, HWUP=325, CLMX=320, ZZEI=320, UUJS=366, PEZP=379, ZBVT=376, UWOD=323, HHXJ=185, GAMH=377, LHLE=360, XGFU=381, UQCB=323, Phavu_v1.0=393, LJPN=121, BILC=183, AWJM=329, ALUC=347, EJCM=378, CLNU=365, UDHA=342, DMLT=379, UJTT=348, ULXR=182, GETL=370, XMQO=294, TIUZ=383, HUQC=314, IXVJ=346, TPEM=369, PPQR=336, FOMH=187, YJJY=345, ZQVF=373, VKVG=134, HUSX=325, NJLF=355, IGUH=372, UJWU=281, DBYD=152, TNAW=274, TXVB=359, GAON=273, OOSO=382, QIAD=244, XKPS=260, XXHP=376, HYZL=363, SDPC=226, AYPS=207, WDCW=337, CNTZ=83, PPPZ=309, GANB=267, Arath_TAIR10=385, LJQF=163, QDVW=371, SBLT=145, GTSV=146, BKQU=365, XZME=379, TAGM=335, ALVQ=315, EATP=299, YHFG=356, LDEL=375, AUGV=384, BCAA=364, IEPQ=375, VXOD=351, HDSY=378, AUIP=368, IAJW=367, XMVD=386, YNUE=373, SOHV=294, Musac_v1.0=365, NHIX=226, GRRW=273, LLXJ=189, WDGV=302, JJZR=137, Mimgu_v2.0=390, ABCD=329, PAWA=375, ENQF=342, RAPY=175, BEFC=361, VITX=363, DOVJ=250, RTTY=370, DIHD=339, PYDB=138, MZOB=375, MOYY=228, OQWW=311, ZQWM=378, WWKL=227, ERWT=340, USIX=134, JQFK=204, TVSH=389, CLRW=274, WHNV=383, AFLV=336, CJNT=364, EAVM=307, LYPZ=378, BEGM=290, JHUL=362, ADHK=334, ICNN=352, YLPM=329, KADG=285, PHCE=329, HOKG=351, RRSV=155, HQOM=289, BTFM=259, VRGZ=195, OOVX=325, ALZF=246, VZWX=132, AWOI=369, ILBQ=360, YDCQ=91, TTRG=370, VTLJ=311, AJUW=257, RPPC=371, JBLI=246, GYBH=277, ABEH=347, Eucgr_v1.1=391, QIEH=252, XVJB=382, YFGP=352, KXSK=333, QICX=340, OXGJ=369, TPHT=234, FIDQ=156, RCUX=276, BZSH=311, DZLN=321, ZQYU=282, VCIN=259, AHRN=345, SUVN=362, XIRK=381, BCGB=311, PAZJ=317, RPQV=304, XRCX=347, VNAL=112, RHAU=376, JBND=386, ZKPF=174, KRJP=352, GCYL=321, MTHW=375, VVRN=364, PUAN=250, MEKP=360, AWQB=382, CBAE=315, YHLF=314, VVPY=353, UOEL=329, MTGC=330, UBLN=375, HMHL=364, AQFM=357, JDQB=382, HDWF=360, Ostlu_v2.0=302, LSHT=271, LFOG=361, TLCA=354, CDFR=379, Theca_v1.1=398, YSBD=119, EFCZ=376, MIRS=304, BEKN=369, AFPO=358, IANR=386, VGSX=384, PYHZ=355, SIBR=355, JKAA=306, LSKK=336, WSJO=316, WBIB=381, VGVI=340, JOIS=107, GNPX=357, XZUY=340, AQGE=364, XPBC=362, QKMG=351, NWMY=273, DZQM=387, FXGI=316, ZINQ=374, RAWF=269, TRRQ=372, YLWW=260, AFQQ=324, PUCW=368, ABIJ=292, GNQG=347, JDTY=348, HQRJ=393, WWQZ=357, XISJ=299, MTII=329, XKWQ=147, RPRU=303, ZXJO=334, DZPJ=247, FGDU=352, WOBD=378, EYKJ=375, LDME=235, BVOF=380, XPAF=328, HBUQ=342, LSJW=347, FZJL=379, ZZOL=281, DCCI=375, OINM=337, YYPE=392, MCHJ=270, EDBB=377, JUWL=345, ASMV=360, ZCDJ=384, UDUT=289, YJUG=274, XIVI=199, DCDT=377, VALZ=199, HXCD=348, OMYK=358, SMMC=357, DXOU=241, GYFU=349, BAHE=335, HIDG=165, WWSS=329, OVIJ=328, JOJQ=366, PUDI=375, FXHG=282, RFAD=112, MKZR=305, GJIY=244, RJIM=377, KCPT=346, DAAD=270, GNRI=367, TEZA=335, YWNF=361, FIKG=187, FOYQ=232, COAQ=380, TJES=346, PWKQ=143, IYDF=357, GUBD=264, FMVB=273, PNZO=300, DXQW=317, SBZH=336, WOGB=369, KJAA=343, LDRY=171, QKQO=378, OEKO=371, MVSE=296, YQEC=311, Poptr_v3.0=316, SXCE=308, BNCU=360, QIKZ=367, VVVV=360, EDEQ=379, DZTK=340, FEDW=253, LQJY=384, MVRF=356, MIXZ=326, EHNF=373, QOXT=328, CFRN=272, DRFX=177, TAVP=342, QMWB=349, BAKF=100, EDHN=395, HKMQ=280, COCP=249, EYRD=377, WBOD=366, FMWZ=378, GJNX=357, FZQN=315, WQML=379, BNDE=345, XRLM=364, BAJW=152, YUOM=366, JKHA=209, THDM=331, IRYH=257, BERS=350, KEYW=306, RJNQ=306, KTWL=350, YFQX=386, COBX=355, SIIK=357, UOMY=365, NHUA=380, ZTHV=355, MNCB=251, FCBJ=328, XVRU=339, BLAJ=327, TCYS=314, IHCQ=239, BGXB=335, WSPM=327, ZACW=376, XTON=186, RYJX=246, WOHL=264, VTUS=369, MRKX=346, CBJR=379, PJSX=391, FCCA=379, MGVU=335, HVBQ=338, THEW=178, GHLP=381, FCEL=321, OPDF=314, AKCR=304, EQDA=346, NMAK=153, YQIJ=248, ZIWB=220, IPWB=258, DRIL=347, JSZD=261, OAGK=383, LBRP=189, IAYV=75, PSHB=315, ZIVZ=204, MROH=305, KNMB=378, ZENX=341, DRGY=236, XXYA=357, OAEZ=242, KLGF=345, EFMS=360, ZGQD=311, EDIT=388, BGZG=325, INQX=352, Selmo_v1.0=369, SKNL=238, KYAD=397, IRZA=126, QEHE=361, BPKH=367, MCPK=195, GJPF=289, JGAB=379, YBML=338, Betvu_v1.1=372, PQED=239, RSCE=384, WDWX=276, ONBE=289, CBNG=185, TJLC=382, RWKR=309, VNMY=372, SKQD=357, BTTS=339, SMUR=257, Vitvi_Genoscope.12X=396, THHD=387, SCAO=287, QACK=357, QCGM=359, AZBL=359, ABSS=330, INSP=319, KRUQ=364, WKCY=382, VJDZ=307, Klefl_v1.0=390, DTNC=380, HXJE=274, ZTLR=309, HILW=387, SILJ=346, ZRIN=325, NBMW=366, GLVK=368, ORJE=335, VJED=161, CUTE=369, DPFW=174, JKKI=207, CMCY=357, NWWI=281, DESP=372, AXAF=160, Elagu_v2.0=285, HEGQ=338, RUIF=224, CMEQ=373, IHJY=153, DLAI=300, MAQO=375, GYRP=229, NFXV=272, KAWQ=356, YSQT=287, QTJY=335, PSKY=263, FGRF=369, FPCO=369, CQMG=304, VYER=193, CWYJ=359, KPUM=364, OTQG=145, DGXS=353, NSPR=242, WQRD=341, VYDM=306, YHZW=367, PSJT=315, FCHS=270, IJMT=245, QVMR=312, IDAU=350, ORKS=365, CWZU=331, NMDZ=337, CMFF=238, KPTE=385, SZPD=374, JVBR=374, PWSG=352, BRUD=301, VLNB=383, WQUF=379, QZXQ=323, UVDC=318, RFMZ=350, WMLW=315, WZFE=378, YSRZ=369, SCEB=368, VYGG=248, KAYP=79, YBQN=333, QPDY=344, XNLP=379, JMTE=187, YFZK=350, CSSK=335, EMBR=358, ZETY=371, AXBO=153, GDKK=323, DVXD=364, SXML=369, OXYP=335, JKNQ=325, JEBK=150, QXSZ=197, CQPW=330, YMES=379, HTFH=268, CKDK=363, XLGK=378, EMAL=349, NDUV=377, ZRMT=325, Spipo_v2=398, JGGD=194, IWIS=340, NOKI=365, NMGG=372, Micpu_v3.0=328, ASZK=186, QZZU=389, MNNM=210, WIGA=266, EWXK=315, UOYN=367, UMUL=362, CSUV=334, AIGO=368, LKKX=370, QXWF=317, BHBK=271, BCYF=110, CQQP=186, HTIP=343, FAJB=271, CIAC=314, RQFE=279, XTZO=360, IDGE=317, KFEB=276, IHOI=123, NUZN=322, PFUD=213, NSTT=215, Chabr_v0.1=318, GUMF=372, GBGT=241, XRTZ=287, TSBQ=192, HABV=141, PDQH=376, HZTS=362, JMUI=200, KYIO=191, TJQY=330, ZPKK=217, BPSG=355, VAZE=323, DVYE=270, RFRB=222, AQZD=332, RHVC=265, HAEU=370, YKFU=311, Orysa_v7.0=385, FNEN=357, VFFP=389, SKYV=336, WGET=321, FALI=384, WEAC=375, HENI=355, ZCUA=371, AOUJ=243, QCOU=341, KDCH=307, SZUO=322, OCTM=357, LGDQ=296, KWGC=330, HVNO=273, OLES=368, IHPC=385, XJGM=178, MWAN=142, FAKD=342, VDAO=153, UGJI=256, IFLI=318, IWMW=360, VHIJ=169, XAXW=130, ONLQ=384, UKUC=251, KYNE=331, NKIN=352, ROEI=308, ISHC=257, FROP=283, VJPU=367, SZYG=292, OCWZ=326, XAYK=377, OHAE=348, ZYAX=342, MHGD=388, CIEA=351, FVXD=296, GFUR=235, VYLQ=394, JMXW=303, HKZW=330, RFSD=309, DHAW=238, STKJ=227, FTRP=127, BJKT=338, RDOO=363, BAZF=297, ISGT=153, HGSM=300, FAMO=299, EDXZ=363, NIGS=324, WMUK=374, URDJ=369, HNCF=360, EMJJ=384, ZYCD=285, JTIG=292, CKKR=332, MFEA=119, WEEQ=288, XHHU=369, BNTL=364, JADL=353, JZVE=347, HERT=313, QNGJ=357, WVEF=376, YGAT=248, FRPM=359, UGNK=334, ISIM=259, URCP=356, NBYP=353, CGDN=378, SGTW=260, VFIV=248, XUAB=361, DLJZ=376, YZGX=148, RSOF=130}
Number of gene trees: 410
410 trees have missing taxa
Calculating quartet distance matrix (for completion of X)
Species tree distances calculated ...
Will attempt to complete bipartitions from X before adding using a distance matrix.
Building set of clusters (X) from gene trees 
In the first round of  sampling 400 samples will be taken
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sample 97 of individual  sampling ...
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sample 98 of individual  sampling ...
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sample 99 of individual  sampling ...
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sample 100 of individual  sampling ...
In second round sampling 1 rounds will be done
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Number of clusters added from gene tree 0 in round0 4971
Number of clusters added from gene tree 1 in round0 6179
Number of clusters added from gene tree 2 in round0 7415
Number of clusters added from gene tree 3 in round0 8377
Number of clusters added from gene tree 4 in round0 9777
Number of clusters added from gene tree 5 in round0 10713
Number of clusters added from gene tree 6 in round0 11341
Number of clusters added from gene tree 7 in round0 12463
Number of clusters added from gene tree 8 in round0 12993
Number of clusters added from gene tree 9 in round0 13801
Number of clusters added from gene tree 10 in round0 14563
Number of clusters added from gene tree 11 in round0 15599
Number of clusters added from gene tree 12 in round0 16323
Number of clusters added from gene tree 13 in round0 16797
Number of clusters added from gene tree 14 in round0 17487
Number of clusters added from gene tree 15 in round0 18295
Number of clusters added from gene tree 16 in round0 18985
Number of clusters added from gene tree 17 in round0 19415
Number of clusters added from gene tree 18 in round0 20293
Number of clusters added from gene tree 19 in round0 20753
Number of clusters added from gene tree 20 in round0 21531
Number of clusters added from gene tree 21 in round0 22167
Number of clusters added from gene tree 22 in round0 22925
Number of clusters added from gene tree 23 in round0 23429
Number of clusters added from gene tree 24 in round0 23899
Number of clusters added from gene tree 25 in round0 24375
Number of clusters added from gene tree 26 in round0 24607
Number of clusters added from gene tree 27 in round0 25087
Number of clusters added from gene tree 28 in round0 25465
Number of clusters added from gene tree 29 in round0 26185
Number of clusters added from gene tree 30 in round0 26549
Number of clusters added from gene tree 31 in round0 27181
Number of clusters added from gene tree 32 in round0 28343
Number of clusters added from gene tree 33 in round0 29465
Number of clusters added from gene tree 34 in round0 29747
Number of clusters added from gene tree 35 in round0 30269
Number of clusters added from gene tree 36 in round0 30753
Number of clusters added from gene tree 37 in round0 31157
Number of clusters added from gene tree 38 in round0 31913
Number of clusters added from gene tree 39 in round0 32269
Number of clusters added from gene tree 40 in round0 32683
Number of clusters added from gene tree 41 in round0 33205
Number of clusters added from gene tree 42 in round0 33721
Number of clusters added from gene tree 43 in round0 34639
Number of clusters added from gene tree 44 in round0 35431
Number of clusters added from gene tree 45 in round0 36401
Number of clusters added from gene tree 46 in round0 36789
Number of clusters added from gene tree 47 in round0 37453
Number of clusters added from gene tree 48 in round0 37899
Number of clusters added from gene tree 49 in round0 38651
Number of clusters added from gene tree 50 in round0 39209
Number of clusters added from gene tree 51 in round0 39677
Number of clusters added from gene tree 52 in round0 39951
Number of clusters added from gene tree 53 in round0 40757
Number of clusters added from gene tree 54 in round0 41329
Number of clusters added from gene tree 55 in round0 41827
Number of clusters added from gene tree 56 in round0 42719
Number of clusters added from gene tree 57 in round0 43655
Number of clusters added from gene tree 58 in round0 44135
Number of clusters added from gene tree 59 in round0 44495
Number of clusters added from gene tree 60 in round0 44771
Number of clusters added from gene tree 61 in round0 45279
Number of clusters added from gene tree 62 in round0 45513
Number of clusters added from gene tree 63 in round0 46289
Number of clusters added from gene tree 64 in round0 47377
Number of clusters added from gene tree 65 in round0 47923
Number of clusters added from gene tree 66 in round0 48341
Number of clusters added from gene tree 67 in round0 48609
Number of clusters added from gene tree 68 in round0 49177
Number of clusters added from gene tree 69 in round0 49565
Number of clusters added from gene tree 70 in round0 50893
Number of clusters added from gene tree 71 in round0 51171
Number of clusters added from gene tree 72 in round0 51539
Number of clusters added from gene tree 73 in round0 52045
Number of clusters added from gene tree 74 in round0 52671
Number of clusters added from gene tree 75 in round0 52899
Number of clusters added from gene tree 76 in round0 53403
Number of clusters added from gene tree 77 in round0 53687
Number of clusters added from gene tree 78 in round0 54131
Number of clusters added from gene tree 79 in round0 54635
Number of clusters added from gene tree 80 in round0 55137
Number of clusters added from gene tree 81 in round0 55555
Number of clusters added from gene tree 82 in round0 56381
Number of clusters added from gene tree 83 in round0 56989
Number of clusters added from gene tree 84 in round0 57783
Number of clusters added from gene tree 85 in round0 58375
Number of clusters added from gene tree 86 in round0 58713
Number of clusters added from gene tree 87 in round0 59383
Number of clusters added from gene tree 88 in round0 59835
Number of clusters added from gene tree 89 in round0 60145
Number of clusters added from gene tree 90 in round0 60665
Number of clusters added from gene tree 91 in round0 61291
Number of clusters added from gene tree 92 in round0 61497
Number of clusters added from gene tree 93 in round0 62391
Number of clusters added from gene tree 94 in round0 63217
Number of clusters added from gene tree 95 in round0 63633
Number of clusters added from gene tree 96 in round0 63875
Number of clusters added from gene tree 97 in round0 64973
Number of clusters added from gene tree 98 in round0 65775
Number of clusters added from gene tree 99 in round0 66613
Number of clusters added from gene tree 100 in round0 66753
Number of clusters added from gene tree 101 in round0 66899
Number of clusters added from gene tree 102 in round0 67043
Number of clusters added from gene tree 103 in round0 67437
Number of clusters added from gene tree 104 in round0 67729
Number of clusters added from gene tree 105 in round0 68083
Number of clusters added from gene tree 106 in round0 68963
Number of clusters added from gene tree 107 in round0 69257
Number of clusters added from gene tree 108 in round0 69863
Number of clusters added from gene tree 109 in round0 70365
Number of clusters added from gene tree 110 in round0 70695
Number of clusters added from gene tree 111 in round0 71011
Number of clusters added from gene tree 112 in round0 71269
Number of clusters added from gene tree 113 in round0 71589
Number of clusters added from gene tree 114 in round0 71861
Number of clusters added from gene tree 115 in round0 71993
Number of clusters added from gene tree 116 in round0 72569
Number of clusters added from gene tree 117 in round0 73119
Number of clusters added from gene tree 118 in round0 74009
Number of clusters added from gene tree 119 in round0 74299
Number of clusters added from gene tree 120 in round0 74519
Number of clusters added from gene tree 121 in round0 74701
Number of clusters added from gene tree 122 in round0 75179
Number of clusters added from gene tree 123 in round0 75717
Number of clusters added from gene tree 124 in round0 76107
Number of clusters added from gene tree 125 in round0 76405
Number of clusters added from gene tree 126 in round0 76861
Number of clusters added from gene tree 127 in round0 77073
Number of clusters added from gene tree 128 in round0 77701
Number of clusters added from gene tree 129 in round0 78265
Number of clusters added from gene tree 130 in round0 78615
Number of clusters added from gene tree 131 in round0 79177
Number of clusters added from gene tree 132 in round0 79521
Number of clusters added from gene tree 133 in round0 79877
Number of clusters added from gene tree 134 in round0 80169
Number of clusters added from gene tree 135 in round0 80893
Number of clusters added from gene tree 136 in round0 81511
Number of clusters added from gene tree 137 in round0 82165
Number of clusters added from gene tree 138 in round0 82521
Number of clusters added from gene tree 139 in round0 82955
Number of clusters added from gene tree 140 in round0 83079
Number of clusters added from gene tree 141 in round0 83285
Number of clusters added from gene tree 142 in round0 83751
Number of clusters added from gene tree 143 in round0 84259
Number of clusters added from gene tree 144 in round0 84505
Number of clusters added from gene tree 145 in round0 84787
Number of clusters added from gene tree 146 in round0 85475
Number of clusters added from gene tree 147 in round0 85647
Number of clusters added from gene tree 148 in round0 86093
Number of clusters added from gene tree 149 in round0 86349
Number of clusters added from gene tree 150 in round0 87413
Number of clusters added from gene tree 151 in round0 87587
Number of clusters added from gene tree 152 in round0 87915
Number of clusters added from gene tree 153 in round0 88667
Number of clusters added from gene tree 154 in round0 88845
Number of clusters added from gene tree 155 in round0 89015
Number of clusters added from gene tree 156 in round0 89499
Number of clusters added from gene tree 157 in round0 90031
Number of clusters added from gene tree 158 in round0 90349
Number of clusters added from gene tree 159 in round0 90715
Number of clusters added from gene tree 160 in round0 91489
Number of clusters added from gene tree 161 in round0 91907
Number of clusters added from gene tree 162 in round0 92079
Number of clusters added from gene tree 163 in round0 92831
Number of clusters added from gene tree 164 in round0 93751
Number of clusters added from gene tree 165 in round0 94079
Number of clusters added from gene tree 166 in round0 94515
Number of clusters added from gene tree 167 in round0 95203
Number of clusters added from gene tree 168 in round0 95463
Number of clusters added from gene tree 169 in round0 96399
Number of clusters added from gene tree 170 in round0 97087
Number of clusters added from gene tree 171 in round0 97671
Number of clusters added from gene tree 172 in round0 98053
Number of clusters added from gene tree 173 in round0 98545
Number of clusters added from gene tree 174 in round0 99301
Number of clusters added from gene tree 175 in round0 99835
Number of clusters added from gene tree 176 in round0 100559
Number of clusters added from gene tree 177 in round0 101577
Number of clusters added from gene tree 178 in round0 101965
Number of clusters added from gene tree 179 in round0 102197
Number of clusters added from gene tree 180 in round0 102763
Number of clusters added from gene tree 181 in round0 103041
Number of clusters added from gene tree 182 in round0 103647
Number of clusters added from gene tree 183 in round0 103787
Number of clusters added from gene tree 184 in round0 104059
Number of clusters added from gene tree 185 in round0 104399
Number of clusters added from gene tree 186 in round0 104615
Number of clusters added from gene tree 187 in round0 105757
Number of clusters added from gene tree 188 in round0 106035
Number of clusters added from gene tree 189 in round0 106341
Number of clusters added from gene tree 190 in round0 106679
Number of clusters added from gene tree 191 in round0 107027
Number of clusters added from gene tree 192 in round0 107277
Number of clusters added from gene tree 193 in round0 107805
Number of clusters added from gene tree 194 in round0 108143
Number of clusters added from gene tree 195 in round0 108251
Number of clusters added from gene tree 196 in round0 108683
Number of clusters added from gene tree 197 in round0 109089
Number of clusters added from gene tree 198 in round0 109245
Number of clusters added from gene tree 199 in round0 109623
Number of clusters added from gene tree 200 in round0 109945
Number of clusters added from gene tree 201 in round0 110259
Number of clusters added from gene tree 202 in round0 110869
Number of clusters added from gene tree 203 in round0 111155
Number of clusters added from gene tree 204 in round0 111887
Number of clusters added from gene tree 205 in round0 112003
Number of clusters added from gene tree 206 in round0 112223
Number of clusters added from gene tree 207 in round0 112443
Number of clusters added from gene tree 208 in round0 112981
Number of clusters added from gene tree 209 in round0 113331
Number of clusters added from gene tree 210 in round0 113997
Number of clusters added from gene tree 211 in round0 114195
Number of clusters added from gene tree 212 in round0 114925
Number of clusters added from gene tree 213 in round0 115021
Number of clusters added from gene tree 214 in round0 115413
Number of clusters added from gene tree 215 in round0 115705
Number of clusters added from gene tree 216 in round0 116293
Number of clusters added from gene tree 217 in round0 116703
Number of clusters added from gene tree 218 in round0 117263
Number of clusters added from gene tree 219 in round0 117723
Number of clusters added from gene tree 220 in round0 118223
Number of clusters added from gene tree 221 in round0 118427
Number of clusters added from gene tree 222 in round0 118725
Number of clusters added from gene tree 223 in round0 119365
Number of clusters added from gene tree 224 in round0 119967
Number of clusters added from gene tree 225 in round0 120591
Number of clusters added from gene tree 226 in round0 120735
Number of clusters added from gene tree 227 in round0 121031
Number of clusters added from gene tree 228 in round0 121421
Number of clusters added from gene tree 229 in round0 121553
Number of clusters added from gene tree 230 in round0 121795
Number of clusters added from gene tree 231 in round0 122239
Number of clusters added from gene tree 232 in round0 122493
Number of clusters added from gene tree 233 in round0 123625
Number of clusters added from gene tree 234 in round0 123797
Number of clusters added from gene tree 235 in round0 124275
Number of clusters added from gene tree 236 in round0 124681
Number of clusters added from gene tree 237 in round0 125811
Number of clusters added from gene tree 238 in round0 126193
Number of clusters added from gene tree 239 in round0 126795
Number of clusters added from gene tree 240 in round0 127487
Number of clusters added from gene tree 241 in round0 127941
Number of clusters added from gene tree 242 in round0 128057
Number of clusters added from gene tree 243 in round0 128427
Number of clusters added from gene tree 244 in round0 128879
Number of clusters added from gene tree 245 in round0 129593
Number of clusters added from gene tree 246 in round0 129935
Number of clusters added from gene tree 247 in round0 130111
Number of clusters added from gene tree 248 in round0 130813
Number of clusters added from gene tree 249 in round0 131041
Number of clusters added from gene tree 250 in round0 131393
Number of clusters added from gene tree 251 in round0 131761
Number of clusters added from gene tree 252 in round0 132709
Number of clusters added from gene tree 253 in round0 133105
Number of clusters added from gene tree 254 in round0 133825
Number of clusters added from gene tree 255 in round0 134087
Number of clusters added from gene tree 256 in round0 134319
Number of clusters added from gene tree 257 in round0 134793
Number of clusters added from gene tree 258 in round0 135225
Number of clusters added from gene tree 259 in round0 135561
Number of clusters added from gene tree 260 in round0 135809
Number of clusters added from gene tree 261 in round0 136015
Number of clusters added from gene tree 262 in round0 136595
Number of clusters added from gene tree 263 in round0 136757
Number of clusters added from gene tree 264 in round0 137047
Number of clusters added from gene tree 265 in round0 137197
Number of clusters added from gene tree 266 in round0 137519
Number of clusters added from gene tree 267 in round0 137771
Number of clusters added from gene tree 268 in round0 137969
Number of clusters added from gene tree 269 in round0 138435
Number of clusters added from gene tree 270 in round0 138669
Number of clusters added from gene tree 271 in round0 139243
Number of clusters added from gene tree 272 in round0 140849
Number of clusters added from gene tree 273 in round0 141041
Number of clusters added from gene tree 274 in round0 141219
Number of clusters added from gene tree 275 in round0 141927
Number of clusters added from gene tree 276 in round0 142229
Number of clusters added from gene tree 277 in round0 142435
Number of clusters added from gene tree 278 in round0 142907
Number of clusters added from gene tree 279 in round0 143349
Number of clusters added from gene tree 280 in round0 143607
Number of clusters added from gene tree 281 in round0 144363
Number of clusters added from gene tree 282 in round0 145067
Number of clusters added from gene tree 283 in round0 145669
Number of clusters added from gene tree 284 in round0 146035
Number of clusters added from gene tree 285 in round0 146649
Number of clusters added from gene tree 286 in round0 147123
Number of clusters added from gene tree 287 in round0 147273
Number of clusters added from gene tree 288 in round0 147521
Number of clusters added from gene tree 289 in round0 147867
Number of clusters added from gene tree 290 in round0 148237
Number of clusters added from gene tree 291 in round0 148521
Number of clusters added from gene tree 292 in round0 149195
Number of clusters added from gene tree 293 in round0 149387
Number of clusters added from gene tree 294 in round0 149607
Number of clusters added from gene tree 295 in round0 150091
Number of clusters added from gene tree 296 in round0 150407
Number of clusters added from gene tree 297 in round0 150931
Number of clusters added from gene tree 298 in round0 151209
Number of clusters added from gene tree 299 in round0 151821
Number of clusters added from gene tree 300 in round0 152035
Number of clusters added from gene tree 301 in round0 152321
Number of clusters added from gene tree 302 in round0 152649
Number of clusters added from gene tree 303 in round0 153187
Number of clusters added from gene tree 304 in round0 153779
Number of clusters added from gene tree 305 in round0 153913
Number of clusters added from gene tree 306 in round0 154145
Number of clusters added from gene tree 307 in round0 154469
Number of clusters added from gene tree 308 in round0 154739
Number of clusters added from gene tree 309 in round0 154977
Number of clusters added from gene tree 310 in round0 155699
Number of clusters added from gene tree 311 in round0 155987
Number of clusters added from gene tree 312 in round0 156731
Number of clusters added from gene tree 313 in round0 157139
Number of clusters added from gene tree 314 in round0 157817
Number of clusters added from gene tree 315 in round0 158039
Number of clusters added from gene tree 316 in round0 158231
Number of clusters added from gene tree 317 in round0 158679
Number of clusters added from gene tree 318 in round0 159007
Number of clusters added from gene tree 319 in round0 159443
Number of clusters added from gene tree 320 in round0 160165
Number of clusters added from gene tree 321 in round0 160447
Number of clusters added from gene tree 322 in round0 161297
Number of clusters added from gene tree 323 in round0 161737
Number of clusters added from gene tree 324 in round0 162067
Number of clusters added from gene tree 325 in round0 162253
Number of clusters added from gene tree 326 in round0 162701
Number of clusters added from gene tree 327 in round0 163077
Number of clusters added from gene tree 328 in round0 163265
Number of clusters added from gene tree 329 in round0 163413
Number of clusters added from gene tree 330 in round0 163789
Number of clusters added from gene tree 331 in round0 164169
Number of clusters added from gene tree 332 in round0 164633
Number of clusters added from gene tree 333 in round0 165025
Number of clusters added from gene tree 334 in round0 165495
Number of clusters added from gene tree 335 in round0 165743
Number of clusters added from gene tree 336 in round0 165955
Number of clusters added from gene tree 337 in round0 166187
Number of clusters added from gene tree 338 in round0 166767
Number of clusters added from gene tree 339 in round0 166927
Number of clusters added from gene tree 340 in round0 167189
Number of clusters added from gene tree 341 in round0 167345
Number of clusters added from gene tree 342 in round0 167571
Number of clusters added from gene tree 343 in round0 168233
Number of clusters added from gene tree 344 in round0 168581
Number of clusters added from gene tree 345 in round0 168845
Number of clusters added from gene tree 346 in round0 169633
Number of clusters added from gene tree 347 in round0 170099
Number of clusters added from gene tree 348 in round0 170241
Number of clusters added from gene tree 349 in round0 170475
Number of clusters added from gene tree 350 in round0 170771
Number of clusters added from gene tree 351 in round0 171589
Number of clusters added from gene tree 352 in round0 171911
Number of clusters added from gene tree 353 in round0 172293
Number of clusters added from gene tree 354 in round0 173111
Number of clusters added from gene tree 355 in round0 173287
Number of clusters added from gene tree 356 in round0 173819
Number of clusters added from gene tree 357 in round0 174055
Number of clusters added from gene tree 358 in round0 174675
Number of clusters added from gene tree 359 in round0 175117
Number of clusters added from gene tree 360 in round0 176495
Number of clusters added from gene tree 361 in round0 176649
Number of clusters added from gene tree 362 in round0 177023
Number of clusters added from gene tree 363 in round0 177423
Number of clusters added from gene tree 364 in round0 177821
Number of clusters added from gene tree 365 in round0 178113
Number of clusters added from gene tree 366 in round0 178485
Number of clusters added from gene tree 367 in round0 179737
Number of clusters added from gene tree 368 in round0 179965
Number of clusters added from gene tree 369 in round0 180181
Number of clusters added from gene tree 370 in round0 180283
Number of clusters added from gene tree 371 in round0 180783
Number of clusters added from gene tree 372 in round0 180997
Number of clusters added from gene tree 373 in round0 181361
Number of clusters added from gene tree 374 in round0 181895
Number of clusters added from gene tree 375 in round0 182047
Number of clusters added from gene tree 376 in round0 182625
Number of clusters added from gene tree 377 in round0 182953
Number of clusters added from gene tree 378 in round0 183143
Number of clusters added from gene tree 379 in round0 183415
Number of clusters added from gene tree 380 in round0 183937
Number of clusters added from gene tree 381 in round0 184345
Number of clusters added from gene tree 382 in round0 184497
Number of clusters added from gene tree 383 in round0 184605
Number of clusters added from gene tree 384 in round0 185053
Number of clusters added from gene tree 385 in round0 185385
Number of clusters added from gene tree 386 in round0 185969
Number of clusters added from gene tree 387 in round0 186129
Number of clusters added from gene tree 388 in round0 186811
Number of clusters added from gene tree 389 in round0 187117
Number of clusters added from gene tree 390 in round0 187395
Number of clusters added from gene tree 391 in round0 187959
Number of clusters added from gene tree 392 in round0 188199
Number of clusters added from gene tree 393 in round0 188335
Number of clusters added from gene tree 394 in round0 188783
Number of clusters added from gene tree 395 in round0 189159
Number of clusters added from gene tree 396 in round0 189727
Number of clusters added from gene tree 397 in round0 190201
Number of clusters added from gene tree 398 in round0 190487
Number of clusters added from gene tree 399 in round0 190755
Number of clusters added from gene tree 400 in round0 191257
Number of clusters added from gene tree 401 in round0 192299
Number of clusters added from gene tree 402 in round0 192437
Number of clusters added from gene tree 403 in round0 192713
Number of clusters added from gene tree 404 in round0 193109
Number of clusters added from gene tree 405 in round0 193581
Number of clusters added from gene tree 406 in round0 194277
Number of clusters added from gene tree 407 in round0 194445
Number of clusters added from gene tree 408 in round0 195047
Number of clusters added from gene tree 409 in round0 195257
------------------------------
gradient0: 195257
Number of Clusters after addition by distance: 195281
calculating extra bipartitions to be added at level 1 ...
Adding to X using resolutions of greedy consensus ...
Limit for sigma of degrees:29500
polytomy size limit : 65
discarded polytomies:  [3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 7, 7, 7, 7, 8, 8, 8, 8, 9, 9, 9, 9, 9, 9, 9, 9, 9, 10, 10, 10, 11, 11, 12, 12, 13, 14, 15, 15, 15, 17, 26, 52, 65]
Threshold 0.0:
Threshold 0.01:
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195285
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195285
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195285
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195297
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195297
Threshold 0.02:
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195297
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195297
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195297
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195299
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195299
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195303
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195317
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195357
Threshold 0.05:
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195357
polytomy of size 7; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 8; rounds with additions with at least 5 support: 0; clusters: 195359
polytomy of size 11; rounds with additions with at least 5 support: 0; clusters: 195367
Threshold 0.1:
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 10; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195367
polytomy of size 10; rounds with additions with at least 5 support: 0; clusters: 195369
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195369
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195369
polytomy of size 8; rounds with additions with at least 5 support: 0; clusters: 195371
polytomy of size 15; rounds with additions with at least 5 support: 0; clusters: 195385
Threshold 0.2:
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195385
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195395
polytomy of size 17; rounds with additions with at least 5 support: 0; clusters: 195421
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195421
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195423
polytomy of size 12; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 7; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195425
polytomy of size 12; rounds with additions with at least 5 support: 0; clusters: 195427
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195427
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195427
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195427
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195427
polytomy of size 15; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 8; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195429
polytomy of size 26; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
Threshold 0.3333333333333333:
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 7; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 7; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 15; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 14; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 11; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195465
polytomy of size 52; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 8; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 4; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 9; rounds with additions with at least 5 support: 0; clusters: 195497
polytomy of size 10; rounds with additions with at least 5 support: 0; clusters: 195501
polytomy of size 13; rounds with additions with at least 5 support: 0; clusters: 195501
polytomy of size 6; rounds with additions with at least 5 support: 0; clusters: 195501
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195501
polytomy of size 65; rounds with additions with at least 5 support: 0; clusters: 195507
polytomy of size 5; rounds with additions with at least 5 support: 0; clusters: 195509
polytomy of size 3; rounds with additions with at least 5 support: 0; clusters: 195509
max k is :0
Number of Clusters after addition by greedy: 195509
gradient0 in heuristiic: 195509
partitions formed in 10165.882 secs
Dynamic Programming starting after 10165.882 secs
Using tree-based weight calculation.
Number of quartet trees in the gene trees: 8092819340376
Size of largest cluster: 1178
Calculated 100000 weights; time (seconds): 15830
Calculated 200000 weights; time (seconds): 5721
Calculated 300000 weights; time (seconds): 5690
Calculated 400000 weights; time (seconds): 5704
Calculated 500000 weights; time (seconds): 5775
Total Number of elements weighted: 570262
Normalized score (portion of input quartet trees satisfied before correcting for multiple individuals): 0.9871724870394578
Optimization score: 7989008595400
Optimal tree inferred in 42987.008 secs.
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(RBYC,(ZHEE,(WVEF,EILE))),(CQMG,((KYAD,(BJSW,AQGE)),((WKCY,ACFP),(EDHN,XVJB))))),((DHAW,(IANR,QNOC)),((SQCF,XFFT),(SXCE,((TJQY,(Prupe_v1.0,NCVK)),(ZPKK,((QIEH,BLVL),(EAVM,VCIN))))))))),((TJLC,((SVVG,(HENI,(UZWG,NHUA))),((INSP,DXQW),(LNER,(LWDA,CWZU))))),(OHAE,(OQHZ,((RKLL,(JETM,RKFX)),(((QZXQ,(VHZV,GEHT)),(KZED,(XOOE,(ZCDJ,PJSX)))),(ZSSR,(SLYR,((CMFF,TTRG),(VLNB,((NXOH,(SUAK,(Phavu_v1.0,(TVSH,KEGA)))),(RMWJ,((JTQQ,PEZP),(KNMB,(HJMP,MYMP))))))))))))))),(((HDWF,YGCX),((ZHMB,(UDUT,KVAY)),((AJJE,((SWGX,WWQZ),((Eucgr_v1.1,AYMT),(NEBM,FGDU)))),((RJNQ,YNUE),(FEDW,(((UJGI,TLCA),(JKNQ,(AXNH,PMTB))),((SJAN,EQYT),(((HKMQ,CJGZ),(DZLN,GVCB)),(((ROLB,IDAU),(ZINQ,BZDF)),((KBRW,YHLF),(ARYD,IMZV))))))))))),(((IHCQ,MFEA),((RVGH,((PAZJ,(RHAU,PXYR)),(VVPY,(XNLP,Manes_v4.1)))),((((NJLF,LPGY),(COAQ,(EZZT,(SIZE,ZIWB)))),(Poptr_v3.0,(INQX,(RZTJ,((LFOG,TDTF),(GLVK,(IEPQ,KKDQ))))))),((RPPC,ZTLR),(((YGAT,VNMY),(XPBC,((CKDK,TVCU),((FWCQ,OSIP),(BNDE,NFXV))))),((ZBVT,HBUQ),((AXPJ,(KCPT,(TXMP,VXOD))),(HNCF,((MYVH,(POZS,OODC)),(BVOF,(BHYC,AEPI))))))))))),((JHCN,(TIUZ,(YZVJ,THHD))),((WWKL,(OBTI,((WAXR,(VFFP,HBHB)),((BCAA,(YUOM,(FCCA,JSZD))),((QICX,IKFD),(UHJR,(UVDC,RJIM))))))),(((PUDI,AWJM),((KPTE,(PKMO,WMUK)),(ATFX,(Theca_v1.1,(WYIG,(OLXF,ZSAB)))))),(((CZPV,Carpa_ASGPBv0.4),(MYZV,HYZL)),(CRNC,(DZTK,(JOIS,((SWPE,UAXP),(RTTY,(((QSKP,LVUS),(UPZX,VDKG)),(Arath_TAIR10,((CSUV,(VMNH,IPWB)),(TZWR,(GTSV,(HABV,(LJQF,(LAPO,(BXBF,UVQL)))))))))))))))))))))))),(((WQUF,(FYSJ,WOBD)),(CVDF,(RUUB,(YNFJ,(((RXEN,(TJES,(FZQN,(OLES,(SKNL,SHEZ))))),((WGET,((FVXD,Betvu_v1.1),(SMMC,(CBJR,(AAXJ,ONLQ))))),((WMLW,XSSD),((PDQH,HDSY),(CUTE,((EYRD,OHKC),(BWRK,ZBPY))))))),(((KJAA,(NXTS,(RNBN,SCAO))),(CTYH,(LKKX,((CPKP,JLOV),((UQCB,EZGR),(LLQV,((BYNZ,KDCH),(CPLT,(LDEL,(IWIS,GCYL)))))))))),((BJKT,(OMYK,(BERS,(GJNX,(HZTS,EDIT))))),((GIWN,(MRKX,BKQU)),((AZBL,SFKQ),(JAFJ,(JGAB,((ZBTA,VJPU),(DVXD,EGOS))))))))))))),((((VTLJ,(ZETY,QURC)),(VUSY,(BFJL,FWBF))),((BNTL,JEXA),(((YSRZ,(FNEN,WVMY)),((OXYP,(BEFC,WRPP)),(KVFU,(VKJD,(PTFA,(ODDO,DAAD)))))),(NGRR,((JPDJ,(AXBO,(ADHK,UFHF))),((QAUE,HUSX),((LRTN,SERM),(AVJK,(WXVX,PPPZ))))))))),((((CLNU,CLMX),(((ZJRC,HLJG),((JTRM,FFFY),(CAQZ,GSZA))),(SBZH,((QIKZ,MVSE),((NTEO,SALZ),((OINM,(SUVN,EDBB)),(AJFN,(WEQK,(CWYJ,TQKZ))))))))),((IHPC,IZLO),((AUIP,(TPEM,GIOY)),(FXGI,(IXVJ,(HUQC,(((CFRN,EYKJ),((JNKW,RFSD),(DDRL,(FUPX,(KFZY,KGJF))))),((BMSE,((DUQG,(OAGK,GUMF)),(DOVJ,(XRCX,(TEZA,(DESP,MHYG)))))),(AFQQ,(DUNJ,(UBLN,(BIDT,((AQZD,YRBQ),((LYPZ,(JYMN,UYED)),(NVSO,((QXWF,HXCD),(ZCUA,JEPE))))))))))))))))),(((GIPR,SZUO),(QACK,(DFYF,(ASMV,SXML)))),(QZZU,((((AHRN,(CPOC,((ALUC,(IZNU,ERWT)),((OQBM,(QSLH,NHAG)),((XQRV,VXKB),(EMBR,NAUM)))))),(MKZR,((BOLZ,(OSMU,LWCK)),((AIOU,JNVS),((UGJI,(NMDZ,LQJY)),((Solly_iTAGv2.3,DLAI),(GHLP,DLJZ))))))),((DKFZ,(YQIJ,((EMAL,(SMUR,HANM)),((DIHD,XVRU),(NIGS,(OEKO,((IDGE,OUER),(MDJK,(MZOB,(ABEH,JWEY)))))))))),((WQRD,(ZSGF,(KTWL,PCNH))),((HGSM,(KPUM,ECTD)),(GGJD,((UOYN,QEHE),(MGVU,(EDEQ,(JGYZ,((JCLQ,YFQX),(YADI,DSUV))))))))))),((COBX,(MZLD,(TORX,(KTAR,YZGX)))),((DCCI,(RWKR,DTNC)),((CLRW,((YRHD,XISJ),(GNRI,(PTBJ,YKZB)))),((GDZS,(EJBY,((XXYA,SIBR),(GRFT,XRLM)))),(((HRUR,(MXFG,JCMU)),(PCGJ,(AYIY,(NBMW,WEAC)))),(((ZRIN,(WOHL,EDXZ)),((TKEK,(UTQR,XAYK)),(GCFE,(PSHB,MQIV)))),((Mimgu_v2.0,(UMUL,(OWAS,(EJCM,(VYDM,(FAMO,FROP)))))),((DMLT,((ATYL,(GETL,(EAAA,SNNC))),((UCNM,LRRR),(GNPX,RTNA)))),((BAHE,FYUH),((TAGM,(FDMM,EQDA)),((PUCW,FUMQ),(PHCE,(IYDF,(WHNV,XMBA)))))))))))))))))))))))))))))))))))))))))))))))))))))))))));
Using tree-based weight calculation.
Final quartet score is: 7989008595400
Final normalized quartet score is: 0.9871724870394578
ASTRAL finished in 51977.663 secs