diff --git a/workflow/rules/mapping.smk b/workflow/rules/mapping.smk index 6ef3150ae..c9922ca83 100644 --- a/workflow/rules/mapping.smk +++ b/workflow/rules/mapping.smk @@ -136,6 +136,8 @@ rule recalibrate_base_qualities: params: extra=config["params"]["gatk"]["BaseRecalibrator"], java_opts="", + resources: + mem_mb=1024, log: "logs/gatk/baserecalibrator/{sample}.log", threads: 8