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PMID25158935_Sample_Description.xls
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PMID25158935_Sample_Description.xls
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Source.Name Comment.ENA_SAMPLE Provider Characteristics.organism Characteristics.strain Characteristics.cell.type Material.Type.1 Comment.LIBRARY_LAYOUT Comment.LIBRARY_SOURCE Comment.LIBRARY_STRATEGY Comment.LIBRARY_SELECTION Performer GroupName Technology.Type Comment.ENA_EXPERIMENT Scan.Name Sample Comment.FASTQ_URI Factor.Value.cell.type bam filename SampleName
HSCMPP_1 ERS399654 Trumpps lab mus musculus C57BL/6J hematopoietic stem cells polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) HSC sequencing assay ERX386678 HSC_1.fastq.gz ERR420375 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420375/ERR420375_1.fastq.gz hematopoietic stem cells /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420375_1.fastq.gz.sorted.bam ERR420375
HSCMPP_2 ERS399648 Trumpps lab mus musculus C57BL/6J hematopoietic stem cells polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) HSC sequencing assay ERX386672 HSC_2.fastq.gz ERR420376 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420376/ERR420376_1.fastq.gz hematopoietic stem cells /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420376_1.fastq.gz.sorted.bam ERR420376
HSCMPP_3 ERS399642 Trumpps lab mus musculus C57BL/6J hematopoietic stem cells polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) HSC sequencing assay ERX386666 HSC_3.fastq.gz ERR420384 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420384/ERR420384_1.fastq.gz hematopoietic stem cells /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420384_1.fastq.gz.sorted.bam ERR420384
HSCMPP_4 ERS399645 Trumpps lab mus musculus C57BL/6J hematopoietic stem cells polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) HSC sequencing assay ERX386669 HSC_4.fastq.gz ERR420380 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420380/ERR420380_1.fastq.gz hematopoietic stem cells /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420380_1.fastq.gz.sorted.bam ERR420380
HSCMPP_5 ERS399639 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 1 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP1 sequencing assay ERX386663 MPP1_1.fastq.gz ERR420379 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420379/ERR420379_1.fastq.gz multipotent progenitor cell, fraction 1 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420379_1.fastq.gz.sorted.bam ERR420379
HSCMPP_6 ERS399650 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 1 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP1 sequencing assay ERX386674 MPP1_3.fastq.gz ERR420372 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420372/ERR420372_1.fastq.gz multipotent progenitor cell, fraction 1 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420372_1.fastq.gz.sorted.bam ERR420372
HSCMPP_7 ERS399641 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 1 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP1 sequencing assay ERX386665 MPP1_4.fastq.gz ERR420377 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420377/ERR420377_1.fastq.gz multipotent progenitor cell, fraction 1 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420377_1.fastq.gz.sorted.bam ERR420377
HSCMPP_8 ERS399646 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 2 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP2 sequencing assay ERX386670 MPP2_1.fastq.gz ERR420383 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420383/ERR420383_1.fastq.gz multipotent progenitor cell, fraction 2 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420383_1.fastq.gz.sorted.bam ERR420383
HSCMPP_9 ERS399651 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 2 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP2 sequencing assay ERX386675 MPP2_2.fastq.gz ERR420373 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420373/ERR420373_1.fastq.gz multipotent progenitor cell, fraction 2 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420373_1.fastq.gz.sorted.bam ERR420373
HSCMPP_10 ERS399653 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 2 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP2 sequencing assay ERX386677 MPP2_3.fastq.gz ERR420381 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420381/ERR420381_1.fastq.gz multipotent progenitor cell, fraction 2 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420381_1.fastq.gz.sorted.bam ERR420381
HSCMPP_11 ERS399652 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 3 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP3 sequencing assay ERX386676 MPP3_1.fastq.gz ERR420371 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420371/ERR420371_1.fastq.gz multipotent progenitor cell, fraction 3 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420371_1.fastq.gz.sorted.bam ERR420371
HSCMPP_12 ERS399647 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 3 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP3 sequencing assay ERX386671 MPP3_2.fastq.gz ERR420382 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420382/ERR420382_1.fastq.gz multipotent progenitor cell, fraction 3 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420382_1.fastq.gz.sorted.bam ERR420382
HSCMPP_13 ERS399640 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 3 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP3 sequencing assay ERX386664 MPP3_3.fastq.gz ERR420374 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420374/ERR420374_1.fastq.gz multipotent progenitor cell, fraction 3 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420374_1.fastq.gz.sorted.bam ERR420374
HSCMPP_14 ERS399643 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 4 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP4 sequencing assay ERX386667 MPP4_1.fastq.gz ERR420378 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420378/ERR420378_1.fastq.gz multipotent progenitor cell, fraction 4 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420378_1.fastq.gz.sorted.bam ERR420378
HSCMPP_15 ERS399649 Trumpps lab mus musculus C57BL/6J multipotent progenitor cell, fraction 4 polyA-RNA PAIRED TRANSCRIPTOMIC RNA-seq cDNA German Cancer Research Center (DKFZ) MPP4 sequencing assay ERX386673 MPP4_2.fastq.gz ERR420385 ftp.sra.ebi.ac.uk/vol1/fastq/ERR420/ERR420385/ERR420385_1.fastq.gz multipotent progenitor cell, fraction 4 /home/med-sal/NAS/Yuan/Jenny/data/HISAT_OUT/ERR420385_1.fastq.gz.sorted.bam ERR420385