From 14c2522f75d3bf9f2f9bdac6e82e54c43796192f Mon Sep 17 00:00:00 2001
From: astrdhr <tropa1996@gmail.com>
Date: Wed, 4 Oct 2023 23:40:23 +0100
Subject: [PATCH] =?UTF-8?q?Bump=20version:=200.3.0=20=E2=86=92=200.4.0?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 .bumpversion.cfg         | 2 +-
 .github/workflows/ci.yml | 4 ++--
 conf/base.config         | 6 +++---
 containers/Dockerfile    | 2 +-
 readme.md                | 2 +-
 5 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/.bumpversion.cfg b/.bumpversion.cfg
index 17fae8a..8491b03 100644
--- a/.bumpversion.cfg
+++ b/.bumpversion.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.3.0
+current_version = 0.4.0
 commit = True
 tag = True
 
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index aad2898..019fb95 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -24,7 +24,7 @@ jobs:
           platforms: linux/amd64
           load: true
           push: false
-          tags: ghcr.io/${{ github.repository }}:0.3.0, ghcr.io/${{ github.repository }}:latest
+          tags: ghcr.io/${{ github.repository }}:0.4.0, ghcr.io/${{ github.repository }}:latest
       - name: 'Install Nextflow'
         uses: stracquadaniolab/gh-action-setup-nextflow@v0.2.0
       - name: 'Testing Nextflow pipeline with test profile'
@@ -39,4 +39,4 @@ jobs:
           file: containers/Dockerfile
           platforms: linux/amd64
           push: true
-          tags: ghcr.io/${{ github.repository }}:0.3.0, ghcr.io/${{ github.repository }}:latest
\ No newline at end of file
+          tags: ghcr.io/${{ github.repository }}:0.4.0, ghcr.io/${{ github.repository }}:latest
\ No newline at end of file
diff --git a/conf/base.config b/conf/base.config
index c365e3b..04784c5 100644
--- a/conf/base.config
+++ b/conf/base.config
@@ -2,7 +2,7 @@
 manifest {
   name = 'scilenzio-yeast-nf'
   description = 'Analysis of transcriptional repression in synthetic yeast chromosome using RNA-seq data.'
-  version = '0.3.0'
+  version = '0.4.0'
   homePage = 'https://github.com/stracquadaniolab/scilenzio-yeast-nf.git'
   author = 'Anima Sutradhar'
   nextflowVersion = '>=20.07.1'
@@ -40,7 +40,7 @@ profiles {
         shifter.enabled        = false
         charliecloud.enabled   = false
 
-        process.container = "ghcr.io/stracquadaniolab/scilenzio-yeast-nf:0.3.0"
+        process.container = "ghcr.io/stracquadaniolab/scilenzio-yeast-nf:0.4.0"
     }
 
     singularity {
@@ -51,7 +51,7 @@ profiles {
         shifter.enabled        = false
         charliecloud.enabled   = false
 
-        process.container = "docker://ghcr.io/stracquadaniolab/scilenzio-yeast-nf:0.3.0"
+        process.container = "docker://ghcr.io/stracquadaniolab/scilenzio-yeast-nf:0.4.0"
     }
 
     slurm {
diff --git a/containers/Dockerfile b/containers/Dockerfile
index 6dd168e..ba3fc76 100644
--- a/containers/Dockerfile
+++ b/containers/Dockerfile
@@ -22,7 +22,7 @@ LABEL org.opencontainers.image.documentation="https://github.com/stracquadaniola
 LABEL org.opencontainers.image.source="https://github.com/stracquadaniolab/scilenzio-yeast-nf"
 LABEL org.opencontainers.image.vendor="stracquadaniolab"
 LABEL org.opencontainers.image.authors="Anima Sutradhar"
-LABEL org.opencontainers.image.revision="v0.3.0"
+LABEL org.opencontainers.image.revision="v0.4.0"
 
 COPY --chown=micromamba:micromamba ${CONDA_FILE} /tmp
 RUN micromamba install -y -n base -f /tmp/`basename ${CONDA_FILE}` && \
diff --git a/readme.md b/readme.md
index daa3b1a..b91428f 100644
--- a/readme.md
+++ b/readme.md
@@ -1,6 +1,6 @@
 # scilenzio-yeast-nf
 
-![](https://img.shields.io/badge/current_version-0.3.0-blue)
+![](https://img.shields.io/badge/current_version-0.4.0-blue)
 ![](https://github.com/stracquadaniolab/scilenzio-yeast-nf/workflows/build/badge.svg)
 ## Overview
 Analysis of transcriptional repression in synthetic yeast chromosome using RNA-seq data.