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DESCRIPTION
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DESCRIPTION
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Package: Socrates
Title: Analysis of scATAC-seq data
Version: 0.0.1
Authors@R:
person(given = "Alexandre",
family = "Marand",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "YOUR-ORCID-ID"))
Description: What the package does (one paragraph).
License: `use_mit_license()`, `use_gpl3_license()` or friends to
pick a license
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
biocViews:
Depends:
R (>= 4.0.0),
cicero (>= 1.4.4),
FNN (>= 1.1.3),
Seurat (>= 4.0.1),
SeuratObject (>= 4.0.1),
doSNOW (>= 1.0.18),
iterators (>= 1.0.12),
itertools (>= 0.1.3),
glmnet (>= 3.0.2),
DelayedArray (>= 0.14.0),
GenomicFeatures (>= 1.40.0),
GenomicRanges (>= 1.40.0),
IRanges (>= 2.22.2),
MASS (>= 7.3.51.6),
viridis (>= 0.5.1),
irlba (>= 2.3.3),
uwot (>= 0.1.8),
scales (>= 1.1.0),
RColorBrewer (>= 1.1.2),
nabor (>= 0.5.0),
CMF (>= 1.0.2),
RcppML (>= 0.3.5)