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Releases: sys-bio/roadrunner

1.6.0

30 Jun 20:58
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  • Migrated to LLVM 6
  • Added an API for editing a model after an SBML file has been loaded
  • Added the ability to quickly save and reload the state of a RoadRunner instance
  • Fixed issue #562
  • Added the ability to set an array of integrator tolerances to address issue #247

1.5.4

25 Jun 23:08
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  • Separated certain functions with array and NamedArray versions
  • Approximations are now disabled by default for steady state calculation
  • Rate rules now work with steady state calculation
  • Fixed bugs with AUTO2000 plugin
  • Added legacy support back for distrib package

1.5.3

13 Jan 03:50
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  • Added internalOneStep
  • Added NLEQ1 solver back
  • Added function to reset parameters
  • Fixed memory leak (thanks @andrewhu-uw)
  • Fixed issues with steadyStateApproximate
  • Added functions to get rates of change, for either dependent or independent floating species
  • Added function to reset SelectionLists
  • Added function to get all list of all time course selections
  • Added function to get extended stoichiometry matrix (thanks @0u812)

1.5.1

03 Aug 22:36
e386bf5
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1.5.0

26 Jul 02:32
75b1efe
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1.4.24

11 Oct 20:59
1.4.24
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  • Unfix negative start times

1.4.23

11 Oct 05:17
1.4.23
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  • Remove matplotlib as dep per #423

1.4.22

10 Oct 20:38
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  • Fix discontinuities in CC calculations
  • Fix #396 (conserved quantities with same indep. var)
  • Fix start time issue (for better or worse)
  • Fix var. typos per Kiri

1.4.18

17 May 17:33
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Bump version to 1.4.18

Downloads available on SourceForge.

1.4.17

17 May 06:06
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Bugfix release. Add support for setting integrator property, i.e.

r.integrator = 'gillespie'