diff --git a/README.md b/README.md index c1afa39..8983146 100644 --- a/README.md +++ b/README.md @@ -2,44 +2,46 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-04-02 12:10:54 UTC +2024-04-03 12:10:07 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 616 | 16 | 50 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) | 2e0a1f | -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 616 | 16 | 50 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920583) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920585) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920584) | 83f34d | -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 616 | 16 | 50 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 617 | 16 | 50 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) | 2e0a1f | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 617 | 16 | 50 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920583) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920585) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920584) | 83f34d | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 617 | 16 | 50 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | | [theislab/scvelo](https://github.com/theislab/scvelo) | 385 | 13 | 56 | 101 | [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | | [theislab/cellrank](https://github.com/theislab/cellrank) | 295 | 8 | 18 | 37 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8501908678) [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8317773998) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8501972156) | 906957 | | [theislab/scib](https://github.com/theislab/scib) | 264 | 15 | 37 | 58 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/8510251633) | 59ae6e | | [theislab/scgen](https://github.com/theislab/scgen) | 243 | 9 | 19 | 50 | [![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) | d79e1f | -| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8515370255) | 55bcbb | +| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8531112809) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | | [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 129 | 5 | 21 | 24 | [![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/8433074462) | 045471 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 42 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) | 27d854 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 42 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 42 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8484165738) | fb6e7d | +| [theislab/anndata2ri](https://github.com/theislab/anndata2ri) | 112 | 7 | 15 | 16 | [![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8525182171) | e7af13 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8523851036) | 048f43 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) | 27d854 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 26 | 13 | [![](https://github.com/theislab/ncem/workflows/Labeler/badge.svg)](https://github.com/theislab/ncem/actions/runs/5392074704) | 216fd5 | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 26 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | | [theislab/moscot](https://github.com/theislab/moscot) | 90 | 3 | 37 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) | 6ea9a1 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 28 | 15 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8493684951) | 0f888e | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 28 | 15 | [![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) | 54b7f3 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 28 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 27 | 15 | [![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8535373293) [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8535373296) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8535373364) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8535373294) | 08408a | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 27 | 15 | [![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) | 54b7f3 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 27 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | | [theislab/destiny](https://github.com/theislab/destiny) | 67 | 5 | 31 | 12 | [![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) | 300eb2 | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825767) [![](https://github.com/theislab/batchglm/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825761) | 11ffbb | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4898948664) | b893fd | -| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 11 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8485425604) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8516062145) | 3944b1 | +| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 11 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8485425604) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8531820189) | 3944b1 | | [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 11 | 5 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/8512286858) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/8512286860) | 3a6a20 | | [theislab/hadge](https://github.com/theislab/hadge) | 19 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | | [theislab/hadge](https://github.com/theislab/hadge) | 19 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/pre-commit/badge.svg)](https://github.com/theislab/hadge/actions/runs/8468875722) [![](https://github.com/theislab/hadge/workflows/hadge%20test%20workflow/badge.svg)](https://github.com/theislab/hadge/actions/runs/8468875726) | 6441e6 | | [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/7921988741) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/7921988747) | 294880 | | [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) | 5bf0cd | +| [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 3 | 5 | [![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8525179343) | 14c20a | | [theislab/graphcompass](https://github.com/theislab/graphcompass) | 11 | 1 | 0 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 5 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) | e441a5 | | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 4 | 1 | 0 | 0 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825726) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825728) | f5c767 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8522403069) | f34fc5 | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8538298235) | ff08e8 | | [theislab/transcription_factor_activity](https://github.com/theislab/transcription_factor_activity) | 1 | 1 | 5 | 1 | [![](https://github.com/theislab/transcription_factor_activity/workflows/Check%20Build/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287206) [![](https://github.com/theislab/transcription_factor_activity/workflows/Test/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287208) | ced39f | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Labeler/badge.svg)](https://github.com/theislab/idtrack/actions/runs/5369045662) | 12aa73 | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/idtrack/actions/runs/4836150850) | 63e94a | @@ -49,17 +51,16 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1283 | 30 | 21 | 438 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1284 | 30 | 21 | 438 | | [theislab/scarches](https://github.com/theislab/scarches) | 305 | 14 | 35 | 47 | -| [theislab/dca](https://github.com/theislab/dca) | 231 | 11 | 31 | 67 | +| [theislab/dca](https://github.com/theislab/dca) | 231 | 11 | 31 | 68 | | [theislab/paga](https://github.com/theislab/paga) | 183 | 10 | 21 | 31 | | [theislab/diffxpy](https://github.com/theislab/diffxpy) | 171 | 6 | 107 | 23 | | [theislab/kBET](https://github.com/theislab/kBET) | 139 | 8 | 8 | 23 | | [theislab/scCODA](https://github.com/theislab/scCODA) | 129 | 9 | 8 | 23 | -| [theislab/sc-pert](https://github.com/theislab/sc-pert) | 124 | 6 | 6 | 10 | -| [theislab/anndata2ri](https://github.com/theislab/anndata2ri) | 112 | 7 | 16 | 16 | +| [theislab/sc-pert](https://github.com/theislab/sc-pert) | 125 | 6 | 6 | 10 | | [theislab/chemCPA](https://github.com/theislab/chemCPA) | 86 | 5 | 9 | 22 | -| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 79 | 4 | 0 | 9 | +| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 81 | 4 | 0 | 9 | | [theislab/cpa](https://github.com/theislab/cpa) | 73 | 4 | 13 | 15 | | [theislab/scib-pipeline](https://github.com/theislab/scib-pipeline) | 56 | 7 | 16 | 26 | | [theislab/AutoGeneS](https://github.com/theislab/AutoGeneS) | 53 | 6 | 4 | 8 | @@ -84,7 +85,6 @@ GitHub Dashboard | [theislab/scanpy-in-R](https://github.com/theislab/scanpy-in-R) | 13 | 3 | 1 | 0 | | [theislab/multicpa](https://github.com/theislab/multicpa) | 12 | 2 | 1 | 2 | | [theislab/multigrate](https://github.com/theislab/multigrate) | 12 | 3 | 7 | 3 | -| [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 4 | 5 | | [theislab/MetaMap](https://github.com/theislab/MetaMap) | 11 | 7 | 0 | 8 | | [theislab/scPoli_reproduce](https://github.com/theislab/scPoli_reproduce) | 11 | 3 | 1 | 4 | | [theislab/diffxpy_tutorials](https://github.com/theislab/diffxpy_tutorials) | 10 | 8 | 4 | 2 | diff --git a/index.html b/index.html index e828aba..97329de 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@
-2024-04-02 12:12:59 UTC
theislab/single-cell-best-practices | -616 | +617 | 16 | 50 | 134 | @@ -83,7 +83,7 @@|||||||||
theislab/single-cell-best-practices | -616 | +617 | 16 | 50 | 134 | @@ -94,7 +94,7 @@|||||||||
theislab/single-cell-best-practices | -616 | +617 | 16 | 50 | 134 | @@ -145,7 +145,7 @@8 | 166 | 13 | -+ | 55bcbb | ||||
045471 | ||||||||||||||
theislab/anndata2ri | +112 | +7 | +15 | +16 | ++ | e7af13 | +||||||||
theislab/ehrapy | 109 | 5 | -42 | +41 | +14 | ++ | 048f43 | +|||||||
theislab/ehrapy | +109 | +5 | +41 | 14 | 27d854 | @@ -191,21 +209,12 @@theislab/ehrapy | 109 | 5 | -42 | +41 | 14 | 84d33c | ||
theislab/ehrapy | -109 | -5 | -42 | -14 | -- | fb6e7d | -||||||||
theislab/ncem | 96 | 6 | @@ -214,7 +223,7 @@216fd5 | |||||||||||
theislab/ncem | 96 | 6 | @@ -224,7 +233,7 @@d03a07 | |||||||||||
theislab/moscot | 90 | 3 | @@ -233,20 +242,23 @@6ea9a1 | |||||||||||
theislab/pertpy | 80 | 4 | -28 | +27 | 15 | -- | 0f888e | ++ + + | +08408a | |||||
theislab/pertpy | 80 | 4 | -28 | +27 | 15 |
@@ -254,16 +266,16 @@ GitHub Dashboard |
54b7f3 | |||||||
theislab/pertpy | 80 | 4 | -28 | +27 | 15 | d00c5f | ||||||||
theislab/destiny | 67 | 5 | @@ -272,7 +284,7 @@300eb2 | |||||||||||
theislab/batchglm | 26 | 3 | @@ -282,7 +294,7 @@11ffbb | |||||||||||
theislab/batchglm | 26 | 3 | @@ -291,17 +303,17 @@b893fd | |||||||||||
theislab/spapros | 21 | 3 | 11 | 5 | - | +3944b1 | ||||||||
theislab/spapros | 21 | 3 | @@ -311,7 +323,7 @@3a6a20 | |||||||||||
theislab/hadge | 19 | 3 | @@ -320,7 +332,7 @@1ed105 | |||||||||||
theislab/hadge | 19 | 3 | @@ -330,7 +342,7 @@6441e6 | |||||||||||
theislab/geome | 15 | 3 | @@ -340,7 +352,7 @@294880 | |||||||||||
theislab/geome | 15 | 3 | @@ -349,6 +361,15 @@5bf0cd | |||||||||||
theislab/scanpydoc | +12 | +6 | +3 | +5 | ++ | 14c20a | +||||||||
theislab/graphcompass | 11 | @@ -393,8 +414,8 @@2 | 0 | 0 | -- | f34fc5 | ++ | ff08e8 | ||||||
theislab/transcription_factor_activity | @@ -460,7 +481,7 @@||||||||||||||
theislab/single-cell-tutorial | -1283 | +1284 | 30 | 21 | 438 | @@ -477,7 +498,7 @@231 | 11 | 31 | -67 | +68 | ||||
theislab/paga | @@ -509,207 +530,193 @@||||||||||||||
theislab/sc-pert | -124 | +125 | 6 | 6 | 10 | |||||||||
theislab/anndata2ri | -112 | -7 | -16 | -16 | -||||||||||
theislab/chemCPA | 86 | 5 | 9 | 22 | ||||||||||
theislab/single-cell-transformer-papers | -79 | +81 | 4 | 0 | 9 | |||||||||
theislab/cpa | 73 | 4 | 13 | 15 | ||||||||||
theislab/scib-pipeline | 56 | 7 | 16 | 26 | ||||||||||
theislab/AutoGeneS | 53 | 6 | 4 | 8 | ||||||||||
theislab/trVAE | 53 | 7 | 2 | 11 | ||||||||||
theislab/scib-reproducibility | 50 | 6 | 3 | 15 | ||||||||||
theislab/spatial_scog_workshop_2022 | 43 | 9 | 0 | 24 | ||||||||||
theislab/pseudodynamics | 39 | 7 | 0 | 6 | ||||||||||
theislab/tcellmatch | 37 | 9 | 3 | 7 | ||||||||||
theislab/deepflow | 31 | 5 | 1 | 14 | ||||||||||
theislab/scArches-reproducibility | 31 | 5 | 5 | 0 | ||||||||||
theislab/DeepRT | 26 | 2 | 11 | 10 | ||||||||||
theislab/graph_abstraction | 26 | 8 | 0 | 10 | ||||||||||
theislab/scvelo_notebooks | 26 | 2 | 2 | 12 | ||||||||||
theislab/scTab | 25 | 2 | 0 | 3 | ||||||||||
theislab/Covid_meta_analysis | 24 | 8 | 2 | 11 | ||||||||||
theislab/interactive_plotting | 21 | 4 | 11 | 7 | ||||||||||
theislab/mubind | 19 | 3 | 30 | 0 | ||||||||||
theislab/scgen-reproducibility | 17 | 4 | 5 | 8 | ||||||||||
theislab/cellrank_reproducibility | 14 | 2 | 0 | 8 | ||||||||||
theislab/campa | 13 | 4 | 5 | 4 | ||||||||||
theislab/DeepCollisionalCrossSection | 13 | 5 | 1 | 6 | ||||||||||
theislab/scanpy-in-R | 13 | 3 | 1 | 0 | ||||||||||
theislab/multicpa | 12 | 2 | 1 | 2 | ||||||||||
theislab/multigrate | 12 | 3 | 7 | 3 | ||||||||||
theislab/scanpydoc | -12 | -6 | -4 | -5 | -||||||||||
theislab/MetaMap | 11 | diff --git a/repos.csv b/repos.csv index aba86bc..9295551 100644 --- a/repos.csv +++ b/repos.csv @@ -28,7 +28,9 @@ theislab,MRGR_stress_analysis,theislab/MRGR_stress_analysis,0,3,0,0,FALSE,https: theislab,MetaMap,theislab/MetaMap,11,7,0,8,FALSE,https://github.com/theislab/MetaMap,11,NA,NA,NA theislab,MetaMap-web,theislab/MetaMap-web,0,4,2,0,FALSE,https://github.com/theislab/MetaMap-web,0,NA,NA,NA theislab,PathReg,theislab/PathReg,8,3,0,0,FALSE,https://github.com/theislab/PathReg,8,NA,NA,NA -theislab,anndata2ri,theislab/anndata2ri,112,7,16,16,FALSE,https://github.com/theislab/anndata2ri,112,NA,NA,NA +theislab,anndata2ri,theislab/anndata2ri,112,7,15,16,FALSE,https://github.com/theislab/anndata2ri,112,e7af1370b1d4d553db4d55e50a9ef39c42394190,"[pre-commit.ci] pre-commit autoupdate (#164) + +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8525182171) theislab,archmap_admin,theislab/archmap_admin,0,2,0,0,FALSE,https://github.com/theislab/archmap_admin,0,NA,NA,NA theislab,archmap_doc,theislab/archmap_doc,0,3,0,0,FALSE,https://github.com/theislab/archmap_doc,0,NA,NA,NA theislab,astrocytes_reprogramming_analysis,theislab/astrocytes_reprogramming_analysis,1,5,0,0,FALSE,https://github.com/theislab/astrocytes_reprogramming_analysis,1,NA,NA,NA @@ -90,22 +92,25 @@ theislab,cpa,theislab/cpa,73,4,13,15,FALSE,https://github.com/theislab/cpa,73,NA theislab,cpa-reproducibility,theislab/cpa-reproducibility,7,2,1,1,FALSE,https://github.com/theislab/cpa-reproducibility,7,NA,NA,NA theislab,cross_system_integration,theislab/cross_system_integration,9,2,10,1,FALSE,https://github.com/theislab/cross_system_integration,9,NA,NA,NA theislab,dali,theislab/dali,0,7,0,1,FALSE,https://github.com/theislab/dali,0,NA,NA,NA -theislab,dca,theislab/dca,231,11,31,67,FALSE,https://github.com/theislab/dca,231,NA,NA,NA +theislab,dca,theislab/dca,231,11,31,68,FALSE,https://github.com/theislab/dca,231,NA,NA,NA theislab,deepflow,theislab/deepflow,31,5,1,14,FALSE,https://github.com/theislab/deepflow,31,NA,NA,NA theislab,destiny,theislab/destiny,67,5,31,12,FALSE,https://github.com/theislab/destiny,67,300eb293fb773fb3d667818b946fdd3c62b0aa05,Fix sparse matrix cast and ggplot aes_string deprecations (#65),[![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) theislab,diffxpy,theislab/diffxpy,171,6,107,23,FALSE,https://github.com/theislab/diffxpy,171,NA,NA,NA theislab,diffxpy_tutorials,theislab/diffxpy_tutorials,10,8,4,2,FALSE,https://github.com/theislab/diffxpy_tutorials,10,NA,NA,NA theislab,disent,theislab/disent,6,3,0,0,FALSE,https://github.com/theislab/disent,6,NA,NA,NA theislab,edgepy,theislab/edgepy,0,3,0,0,FALSE,https://github.com/theislab/edgepy,0,NA,NA,NA -theislab,ehrapy,theislab/ehrapy,109,5,42,14,FALSE,https://github.com/theislab/ehrapy,109,27d854b4ec26b032ddf611cd7b6cf21dd38de253,"Version 0.7.0 +theislab,ehrapy,theislab/ehrapy,109,5,41,14,FALSE,https://github.com/theislab/ehrapy,109,048f43263447709859703db038c7f7f2927c502b,"[pre-commit.ci] pre-commit autoupdate (#680) + +updates: +- [github.com/astral-sh/ruff-pre-commit: v0.3.4 → v0.3.5](https://github.com/astral-sh/ruff-pre-commit/compare/v0.3.4...v0.3.5) + +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8523851036) +theislab,ehrapy,theislab/ehrapy,109,5,41,14,FALSE,https://github.com/theislab/ehrapy,109,27d854b4ec26b032ddf611cd7b6cf21dd38de253,"Version 0.7.0 Signed-off-by: zethson