From 25b986e5374431799133c865d9dd68c8d52033f5 Mon Sep 17 00:00:00 2001 From: GitHub Actions Date: Wed, 25 Dec 2024 12:12:37 +0000 Subject: [PATCH] [status] 2024-12-25 12:12:37 UTC --- README.md | 16 ++++++++-------- index.html | 30 +++++++++++++++--------------- repos.csv | 14 +++++++------- 3 files changed, 30 insertions(+), 30 deletions(-) diff --git a/README.md b/README.md index ba3d1e8..13e26d4 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-12-24 12:11:17 UTC +2024-12-25 12:10:57 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| @@ -21,20 +21,20 @@ GitHub Dashboard | [theislab/moscot](https://github.com/theislab/moscot) | 119 | 3 | 35 | 9 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/12301003048) | 29764d | | [theislab/ncem](https://github.com/theislab/ncem) | 104 | 6 | 28 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | | [theislab/graphcompass](https://github.com/theislab/graphcompass) | 34 | 2 | 1 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | -| [theislab/spapros](https://github.com/theislab/spapros) | 32 | 3 | 12 | 7 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12475445179) | 1ec08e | +| [theislab/spapros](https://github.com/theislab/spapros) | 32 | 3 | 12 | 7 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12488038422) | 1ec08e | | [theislab/spapros](https://github.com/theislab/spapros) | 32 | 3 | 12 | 7 | [![](https://github.com/theislab/spapros/workflows/Build%20spapros%20Package/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589767) [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589776) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589778) [![](https://github.com/theislab/spapros/workflows/Run%20spapros%20Tests/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589764) | 2f6c1a | | [theislab/mubind](https://github.com/theislab/mubind) | 28 | 3 | 29 | 0 | [![](https://github.com/theislab/mubind/workflows/Python%20package/badge.svg)](https://github.com/theislab/mubind/actions/runs/10632591185) | 3f62f8 | | [theislab/hadge](https://github.com/theislab/hadge) | 24 | 3 | 14 | 6 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | | [theislab/multimil](https://github.com/theislab/multimil) | 19 | 5 | 6 | 3 | [![](https://github.com/theislab/multimil/workflows/Check%20Build/badge.svg)](https://github.com/theislab/multimil/actions/runs/11870932723) [![](https://github.com/theislab/multimil/workflows/Test/badge.svg)](https://github.com/theislab/multimil/actions/runs/12336008817) | c721ba | | [theislab/geome](https://github.com/theislab/geome) | 16 | 3 | 3 | 4 | [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/10868284169) | 402a0a | -| [theislab/regvelo](https://github.com/theislab/regvelo) | 13 | 1 | 1 | 1 | [![](https://github.com/theislab/regvelo/workflows/regvelo/badge.svg)](https://github.com/theislab/regvelo/actions/runs/11323656087) | 619e02 | -| [theislab/regvelo](https://github.com/theislab/regvelo) | 13 | 1 | 1 | 1 | [![](https://github.com/theislab/regvelo/workflows/Release/badge.svg)](https://github.com/theislab/regvelo/actions/runs/11307228307) | a98518 | +| [theislab/regvelo](https://github.com/theislab/regvelo) | 14 | 1 | 1 | 1 | [![](https://github.com/theislab/regvelo/workflows/regvelo/badge.svg)](https://github.com/theislab/regvelo/actions/runs/11323656087) | 619e02 | +| [theislab/regvelo](https://github.com/theislab/regvelo) | 14 | 1 | 1 | 1 | [![](https://github.com/theislab/regvelo/workflows/Release/badge.svg)](https://github.com/theislab/regvelo/actions/runs/11307228307) | a98518 | | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 9 | 1 | 1 | 2 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/10706963288) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/10706963242) | 8020e7 | | [theislab/moscot_notebooks](https://github.com/theislab/moscot_notebooks) | 8 | 1 | 7 | 4 | [![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/12458982825) | 320930 | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 7 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) | e441a5 | | [theislab/spapros-pipeline](https://github.com/theislab/spapros-pipeline) | 7 | 2 | 0 | 0 | [![](https://github.com/theislab/spapros-pipeline/workflows/Run%20Example/badge.svg)](https://github.com/theislab/spapros-pipeline/actions/runs/11988359512) | fe84cf | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 3 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12481411061) | 0224ec | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 3 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12492858777) | ac68a3 | | [theislab/spatialdata-db](https://github.com/theislab/spatialdata-db) | 1 | 1 | 25 | 0 | [![](https://github.com/theislab/spatialdata-db/workflows/Check%20Build/badge.svg)](https://github.com/theislab/spatialdata-db/actions/runs/11362121634) [![](https://github.com/theislab/spatialdata-db/workflows/Test/badge.svg)](https://github.com/theislab/spatialdata-db/actions/runs/12336009745) | 5fc4ad | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Build%20idtrack%20Package/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702245) [![](https://github.com/theislab/idtrack/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702249) [![](https://github.com/theislab/idtrack/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702241) [![](https://github.com/theislab/idtrack/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702236) [![](https://github.com/theislab/idtrack/workflows/Run%20idtrack%20Tests/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702246) | ec9e9f | @@ -42,7 +42,7 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1422 | 30 | 21 | 466 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1423 | 30 | 21 | 466 | | [theislab/scarches](https://github.com/theislab/scarches) | 344 | 12 | 54 | 52 | | [theislab/scgen](https://github.com/theislab/scgen) | 276 | 9 | 28 | 56 | | [theislab/dca](https://github.com/theislab/dca) | 251 | 11 | 32 | 71 | @@ -55,11 +55,11 @@ GitHub Dashboard | [theislab/chemCPA](https://github.com/theislab/chemCPA) | 104 | 5 | 12 | 24 | | [theislab/cpa](https://github.com/theislab/cpa) | 90 | 5 | 21 | 17 | | [theislab/destiny](https://github.com/theislab/destiny) | 79 | 5 | 31 | 11 | -| [theislab/nicheformer](https://github.com/theislab/nicheformer) | 73 | 5 | 14 | 3 | +| [theislab/nicheformer](https://github.com/theislab/nicheformer) | 73 | 5 | 15 | 3 | | [theislab/scib-pipeline](https://github.com/theislab/scib-pipeline) | 67 | 7 | 16 | 27 | | [theislab/AutoGeneS](https://github.com/theislab/AutoGeneS) | 57 | 6 | 6 | 8 | +| [theislab/scib-reproducibility](https://github.com/theislab/scib-reproducibility) | 56 | 6 | 4 | 13 | | [theislab/trVAE](https://github.com/theislab/trVAE) | 56 | 6 | 3 | 12 | -| [theislab/scib-reproducibility](https://github.com/theislab/scib-reproducibility) | 55 | 6 | 4 | 13 | | [theislab/scTab](https://github.com/theislab/scTab) | 53 | 4 | 1 | 9 | | [theislab/spatial_scog_workshop_2022](https://github.com/theislab/spatial_scog_workshop_2022) | 50 | 9 | 0 | 27 | | [theislab/pseudodynamics](https://github.com/theislab/pseudodynamics) | 39 | 7 | 0 | 6 | diff --git a/index.html b/index.html index f0c8029..24ecebe 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

GitHub Dashboard


-2024-12-24 12:12:33 UTC

+2024-12-25 12:12:24 UTC

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GitHub Dashboard

+ @@ -280,7 +280,7 @@

GitHub Dashboard

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GitHub Dashboard

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GitHub Dashboard

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Repos without Github Actions

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Repos without Github Actions

- + @@ -508,18 +508,18 @@

Repos without Github Actions

- + - - + + - - + + - - + + diff --git a/repos.csv b/repos.csv index f40f2e1..962e061 100644 --- a/repos.csv +++ b/repos.csv @@ -194,7 +194,7 @@ theislab,gastrulation_analysis,theislab/gastrulation_analysis,10,4,0,1,FALSE,htt theislab,geome,theislab/geome,16,3,3,4,FALSE,https://github.com/theislab/geome,16,402a0a8cdb442fee8666416e5f163c4098fa0c07,"Merge pull request #55 from theislab/fix/toarray Fix Sparse "".A"" Not Found",[![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/10868284169) -theislab,gh-dashboard,theislab/gh-dashboard,3,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,3,0224ecb51eecb5df8b5c308a54990177e609c563,[status] 2024-12-23 12:12:41 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12481411061) +theislab,gh-dashboard,theislab/gh-dashboard,3,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,3,ac68a326b1d7ec4634f6559a693cb7f655706515,[status] 2024-12-24 12:12:39 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/12492858777) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,graphcompass,theislab/graphcompass,34,2,1,0,FALSE,https://github.com/theislab/graphcompass,34,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) theislab,greatpy,theislab/greatpy,9,3,4,0,FALSE,https://github.com/theislab/greatpy,9,NA,NA,NA @@ -241,7 +241,7 @@ theislab,ncem,theislab/ncem,104,6,28,13,FALSE,https://github.com/theislab/ncem,1 theislab,ncem_benchmarks,theislab/ncem_benchmarks,8,4,4,2,FALSE,https://github.com/theislab/ncem_benchmarks,8,NA,NA,NA theislab,ncem_tutorials,theislab/ncem_tutorials,12,4,6,0,FALSE,https://github.com/theislab/ncem_tutorials,12,NA,NA,NA theislab,neural_organoid_atlas,theislab/neural_organoid_atlas,25,6,3,4,FALSE,https://github.com/theislab/neural_organoid_atlas,25,NA,NA,NA -theislab,nicheformer,theislab/nicheformer,73,5,14,3,FALSE,https://github.com/theislab/nicheformer,73,NA,NA,NA +theislab,nicheformer,theislab/nicheformer,73,5,15,3,FALSE,https://github.com/theislab/nicheformer,73,NA,NA,NA theislab,organoid_dexamethason_stimulation,theislab/organoid_dexamethason_stimulation,0,3,0,1,FALSE,https://github.com/theislab/organoid_dexamethason_stimulation,0,NA,NA,NA theislab,paga,theislab/paga,211,10,24,33,FALSE,https://github.com/theislab/paga,211,NA,NA,NA theislab,pancreas-targeted_pharmacology,theislab/pancreas-targeted_pharmacology,0,6,1,2,FALSE,https://github.com/theislab/pancreas-targeted_pharmacology,0,NA,NA,NA @@ -252,10 +252,10 @@ theislab,perturbation-metrics,theislab/perturbation-metrics,4,2,1,0,FALSE,https: theislab,prophet,theislab/prophet,27,6,2,2,FALSE,https://github.com/theislab/prophet,27,NA,NA,NA theislab,prophet-reproducibility,theislab/prophet-reproducibility,0,3,0,0,FALSE,https://github.com/theislab/prophet-reproducibility,0,NA,NA,NA theislab,pseudodynamics,theislab/pseudodynamics,39,7,0,6,FALSE,https://github.com/theislab/pseudodynamics,39,NA,NA,NA -theislab,regvelo,theislab/regvelo,13,1,1,1,FALSE,https://github.com/theislab/regvelo,13,619e025f7b811d77157dda144013ab1b86f8cb54,"Merge pull request #14 from theislab/WWXkenmo-patch-1 +theislab,regvelo,theislab/regvelo,14,1,1,1,FALSE,https://github.com/theislab/regvelo,14,619e025f7b811d77157dda144013ab1b86f8cb54,"Merge pull request #14 from theislab/WWXkenmo-patch-1 Update pyproject.toml",[![](https://github.com/theislab/regvelo/workflows/regvelo/badge.svg)](https://github.com/theislab/regvelo/actions/runs/11323656087) -theislab,regvelo,theislab/regvelo,13,1,1,1,FALSE,https://github.com/theislab/regvelo,13,a9851861451a9af67ef40ded8f56f62957cf334e,"Merge pull request #7 from theislab/feat/update_package +theislab,regvelo,theislab/regvelo,14,1,1,1,FALSE,https://github.com/theislab/regvelo,14,a9851861451a9af67ef40ded8f56f62957cf334e,"Merge pull request #7 from theislab/feat/update_package update dependences",[![](https://github.com/theislab/regvelo/workflows/Release/badge.svg)](https://github.com/theislab/regvelo/actions/runs/11307228307) theislab,reproducability_AutoGeneS,theislab/reproducability_AutoGeneS,0,3,0,0,FALSE,https://github.com/theislab/reproducability_AutoGeneS,0,NA,NA,NA @@ -335,7 +335,7 @@ theislab,scib,theislab/scib,320,14,40,63,FALSE,https://github.com/theislab/scib, * change default to numpy",[![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/12436783802) [![](https://github.com/theislab/scib/workflows/Test/badge.svg)](https://github.com/theislab/scib/actions/runs/12436783809) theislab,scib-pipeline,theislab/scib-pipeline,67,7,16,27,FALSE,https://github.com/theislab/scib-pipeline,67,NA,NA,NA -theislab,scib-reproducibility,theislab/scib-reproducibility,55,6,4,13,FALSE,https://github.com/theislab/scib-reproducibility,55,NA,NA,NA +theislab,scib-reproducibility,theislab/scib-reproducibility,56,6,4,13,FALSE,https://github.com/theislab/scib-reproducibility,56,NA,NA,NA theislab,scvelo,theislab/scvelo,420,13,58,104,FALSE,https://github.com/theislab/scvelo,420,22b6e7e6cdb3c321c5a1be4ab2f29486ba01ab4f,"Update logging (#1281) * Move logging to dedicated module @@ -397,11 +397,11 @@ theislab,single-cell-best-practices,theislab/single-cell-best-practices,804,19,7 * fix typo",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292800) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292810) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292801) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292802) theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,285,15,39,35,FALSE,https://github.com/theislab/single-cell-transformer-papers,285,75797db884ef3cf60e82ed4454168a26e7284637,add manuscript information to index,[![](https://github.com/theislab/single-cell-transformer-papers/workflows/Document%20Generation/badge.svg)](https://github.com/theislab/single-cell-transformer-papers/actions/runs/12447562233) -theislab,single-cell-tutorial,theislab/single-cell-tutorial,1422,30,21,466,FALSE,https://github.com/theislab/single-cell-tutorial,1422,NA,NA,NA +theislab,single-cell-tutorial,theislab/single-cell-tutorial,1423,30,21,466,FALSE,https://github.com/theislab/single-cell-tutorial,1423,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,5,5,6,3,FALSE,https://github.com/theislab/singlecell_proteomics,5,NA,NA,NA theislab,spapros,theislab/spapros,32,3,12,7,FALSE,https://github.com/theislab/spapros,32,1ec08e6809978021e7ad0d7b7ce4f5412f391f79,"Merge pull request #357 from theislab/scrinshot_probe_designer -adapter tutorials to new framework",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12475445179) +adapter tutorials to new framework",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/11988703697) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/12488038422) theislab,spapros,theislab/spapros,32,3,12,7,FALSE,https://github.com/theislab/spapros,32,2f6c1ad9fdab44d29017e268ef215d18278f56b9,prints for identifying mem issues,[![](https://github.com/theislab/spapros/workflows/Build%20spapros%20Package/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589767) [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589776) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589778) [![](https://github.com/theislab/spapros/workflows/Run%20spapros%20Tests/badge.svg)](https://github.com/theislab/spapros/actions/runs/12087589764) theislab,spapros-pipeline,theislab/spapros-pipeline,7,2,0,0,FALSE,https://github.com/theislab/spapros-pipeline,7,fe84cf66cf6cf9b8fb441c74d4c004c20d1003cf,Update readme to refer to spapros smk repo,[![](https://github.com/theislab/spapros-pipeline/workflows/Run%20Example/badge.svg)](https://github.com/theislab/spapros-pipeline/actions/runs/11988359512) theislab,spapros-smk,theislab/spapros-smk,0,2,0,1,FALSE,https://github.com/theislab/spapros-smk,0,NA,NA,NA
12 7 - 1ec08e
theislab/regvelo1314 1 1 1
theislab/regvelo1314 1 1 1 2 0 00224ecac68a3
theislab/spatialdata-db
theislab/single-cell-tutorial14221423 30 21 466 theislab/nicheformer 73 51415 3
8
theislab/trVAEtheislab/scib-reproducibility 56 6312413
theislab/scib-reproducibility55theislab/trVAE56 6413312
theislab/scTab