diff --git a/README.md b/README.md index 02c6afd..2097ea1 100644 --- a/README.md +++ b/README.md @@ -2,31 +2,31 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-03-18 12:10:09 UTC +2024-03-19 12:10:20 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 606 | 16 | 50 | 133 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) | 2e0a1f | -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 606 | 16 | 50 | 133 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920583) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920585) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920584) | 83f34d | -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 606 | 16 | 50 | 133 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | -| [theislab/scvelo](https://github.com/theislab/scvelo) | 382 | 13 | 55 | 101 | [![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317739547) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317739551) [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | -| [theislab/cellrank](https://github.com/theislab/cellrank) | 289 | 8 | 13 | 36 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8319331404) [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8317773998) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8319389141) | 906957 | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 607 | 16 | 50 | 133 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) | 2e0a1f | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 607 | 16 | 50 | 133 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920583) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920585) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920584) | 83f34d | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 607 | 16 | 50 | 133 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | +| [theislab/scvelo](https://github.com/theislab/scvelo) | 382 | 13 | 55 | 100 | [![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317739547) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317739551) [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | +| [theislab/cellrank](https://github.com/theislab/cellrank) | 290 | 8 | 13 | 36 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8319331404) [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8317773998) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8319389141) | 906957 | | [theislab/scib](https://github.com/theislab/scib) | 259 | 16 | 37 | 56 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/7468185443) | d42f91 | | [theislab/scgen](https://github.com/theislab/scgen) | 241 | 9 | 19 | 50 | [![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) | d79e1f | -| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8319269048) | 55bcbb | +| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8335355839) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | -| [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 123 | 6 | 21 | 24 | [![](https://github.com/theislab/zellkonverter/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/7558891230) | 9d557f | -| [theislab/anndata2ri](https://github.com/theislab/anndata2ri) | 111 | 7 | 15 | 16 | [![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8277542950) | e88448 | +| [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 123 | 6 | 22 | 24 | [![](https://github.com/theislab/zellkonverter/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/7558891230) | 9d557f | +| [theislab/anndata2ri](https://github.com/theislab/anndata2ri) | 111 | 7 | 15 | 16 | [![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8339966656) | b9f767 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 106 | 6 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8334272229) | 7ac35f | | [theislab/ehrapy](https://github.com/theislab/ehrapy) | 106 | 6 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 106 | 6 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8310776882) | d8d3f5 | | [theislab/ehrapy](https://github.com/theislab/ehrapy) | 106 | 6 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/7260760638) | ea6b44 | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 24 | 13 | [![](https://github.com/theislab/ncem/workflows/Labeler/badge.svg)](https://github.com/theislab/ncem/actions/runs/5392074704) | 216fd5 | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 24 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | -| [theislab/moscot](https://github.com/theislab/moscot) | 88 | 3 | 44 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) | 6ea9a1 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 78 | 4 | 29 | 15 | [![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) | 54b7f3 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 78 | 4 | 29 | 15 | [![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150458) [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150441) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150453) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150461) | 916c83 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 78 | 4 | 29 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | +| [theislab/moscot](https://github.com/theislab/moscot) | 88 | 3 | 46 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) | 6ea9a1 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 79 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8334269835) | 389bf4 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 79 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) | 54b7f3 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 79 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | | [theislab/destiny](https://github.com/theislab/destiny) | 67 | 5 | 31 | 12 | [![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) | 300eb2 | | [theislab/scib-pipeline](https://github.com/theislab/scib-pipeline) | 54 | 7 | 16 | 26 | [![](https://github.com/theislab/scib-pipeline/workflows/Manual%20workflow/badge.svg)](https://github.com/theislab/scib-pipeline/actions/runs/4118363146) | 1180bc | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825767) [![](https://github.com/theislab/batchglm/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825761) | 11ffbb | @@ -36,14 +36,13 @@ GitHub Dashboard | [theislab/hadge](https://github.com/theislab/hadge) | 18 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/pre-commit/badge.svg)](https://github.com/theislab/hadge/actions/runs/8294357090) [![](https://github.com/theislab/hadge/workflows/hadge%20test%20workflow/badge.svg)](https://github.com/theislab/hadge/actions/runs/8294357101) | 192696 | | [theislab/hadge](https://github.com/theislab/hadge) | 18 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | | [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) | 5bf0cd | -| [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 3 | 5 | [![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8277549254) | 7664da | +| [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 3 | 5 | [![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8339964270) | bb5206 | | [theislab/graphcompass](https://github.com/theislab/graphcompass) | 9 | 1 | 0 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | -| [theislab/moscot_notebooks](https://github.com/theislab/moscot_notebooks) | 6 | 1 | 2 | 2 | [![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/8319362315) | 47ec2f | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 5 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/4510904353) | cb7707 | | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 4 | 1 | 0 | 0 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825726) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825728) | f5c767 | -| [theislab/ehrdata](https://github.com/theislab/ehrdata) | 3 | 3 | 0 | 1 | [![](https://github.com/theislab/ehrdata/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8324843225) [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8324843226) | 069f05 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8326153683) | 9dfba4 | +| [theislab/ehrdata](https://github.com/theislab/ehrdata) | 3 | 3 | 0 | 1 | [![](https://github.com/theislab/ehrdata/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8334566936) [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8334566937) | 7c0ffa | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8342596751) | 78503a | | [theislab/transcription_factor_activity](https://github.com/theislab/transcription_factor_activity) | 1 | 1 | 5 | 1 | [![](https://github.com/theislab/transcription_factor_activity/workflows/Check%20Build/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287206) [![](https://github.com/theislab/transcription_factor_activity/workflows/Test/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287208) | ced39f | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Labeler/badge.svg)](https://github.com/theislab/idtrack/actions/runs/5369045662) | 12aa73 | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/idtrack/actions/runs/4836150850) | 63e94a | @@ -53,17 +52,17 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1268 | 30 | 21 | 437 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1271 | 30 | 21 | 437 | | [theislab/scarches](https://github.com/theislab/scarches) | 299 | 14 | 36 | 48 | | [theislab/dca](https://github.com/theislab/dca) | 229 | 11 | 32 | 67 | | [theislab/paga](https://github.com/theislab/paga) | 182 | 10 | 21 | 31 | -| [theislab/diffxpy](https://github.com/theislab/diffxpy) | 168 | 6 | 106 | 23 | +| [theislab/diffxpy](https://github.com/theislab/diffxpy) | 169 | 6 | 106 | 23 | | [theislab/kBET](https://github.com/theislab/kBET) | 138 | 8 | 7 | 23 | | [theislab/scCODA](https://github.com/theislab/scCODA) | 128 | 9 | 8 | 23 | -| [theislab/sc-pert](https://github.com/theislab/sc-pert) | 122 | 6 | 6 | 10 | +| [theislab/sc-pert](https://github.com/theislab/sc-pert) | 123 | 6 | 6 | 10 | | [theislab/chemCPA](https://github.com/theislab/chemCPA) | 85 | 5 | 7 | 22 | | [theislab/cpa](https://github.com/theislab/cpa) | 72 | 4 | 16 | 15 | -| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 62 | 3 | 0 | 8 | +| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 63 | 3 | 0 | 9 | | [theislab/AutoGeneS](https://github.com/theislab/AutoGeneS) | 53 | 6 | 4 | 8 | | [theislab/trVAE](https://github.com/theislab/trVAE) | 52 | 7 | 2 | 11 | | [theislab/scib-reproducibility](https://github.com/theislab/scib-reproducibility) | 49 | 6 | 3 | 15 | @@ -98,11 +97,11 @@ GitHub Dashboard | [theislab/gastrulation_analysis](https://github.com/theislab/gastrulation_analysis) | 9 | 4 | 0 | 1 | | [theislab/inVAE](https://github.com/theislab/inVAE) | 9 | 3 | 0 | 1 | | [theislab/moslin](https://github.com/theislab/moslin) | 9 | 1 | 0 | 1 | +| [theislab/neural_organoid_atlas](https://github.com/theislab/neural_organoid_atlas) | 9 | 4 | 2 | 1 | | [theislab/superexacttestpy](https://github.com/theislab/superexacttestpy) | 9 | 2 | 3 | 0 | | [theislab/trvaep](https://github.com/theislab/trvaep) | 9 | 3 | 0 | 4 | | [theislab/greatpy](https://github.com/theislab/greatpy) | 8 | 3 | 4 | 0 | | [theislab/ncem_benchmarks](https://github.com/theislab/ncem_benchmarks) | 8 | 4 | 4 | 2 | -| [theislab/neural_organoid_atlas](https://github.com/theislab/neural_organoid_atlas) | 8 | 4 | 2 | 1 | | [theislab/PathReg](https://github.com/theislab/PathReg) | 8 | 3 | 0 | 0 | | [theislab/sc-best-practices-ce](https://github.com/theislab/sc-best-practices-ce) | 8 | 8 | 2 | 3 | | [theislab/squidpy_reproducibility](https://github.com/theislab/squidpy_reproducibility) | 8 | 2 | 0 | 5 | @@ -118,6 +117,7 @@ GitHub Dashboard | [theislab/2020_Mayr](https://github.com/theislab/2020_Mayr) | 6 | 6 | 0 | 8 | | [theislab/disent](https://github.com/theislab/disent) | 6 | 3 | 0 | 0 | | [theislab/intercode](https://github.com/theislab/intercode) | 6 | 3 | 1 | 1 | +| [theislab/moscot_notebooks](https://github.com/theislab/moscot_notebooks) | 6 | 1 | 3 | 2 | | [theislab/scatac_poisson_reproducibility](https://github.com/theislab/scatac_poisson_reproducibility) | 6 | 3 | 0 | 0 | | [theislab/sfaira_tutorials](https://github.com/theislab/sfaira_tutorials) | 6 | 4 | 3 | 2 | | [theislab/trVAE_reproducibility](https://github.com/theislab/trVAE_reproducibility) | 6 | 3 | 2 | 5 | @@ -136,6 +136,7 @@ GitHub Dashboard | [theislab/perturbation-metrics](https://github.com/theislab/perturbation-metrics) | 4 | 2 | 1 | 0 | | [theislab/2022_Tritschler_pancreas_cross_species](https://github.com/theislab/2022_Tritschler_pancreas_cross_species) | 3 | 3 | 0 | 1 | | [theislab/covid-perturbation](https://github.com/theislab/covid-perturbation) | 3 | 3 | 0 | 0 | +| [theislab/jump-cpg0016-segmentation](https://github.com/theislab/jump-cpg0016-segmentation) | 3 | 0 | 0 | 0 | | [theislab/moscot_not](https://github.com/theislab/moscot_not) | 3 | 2 | 8 | 1 | | [theislab/multires-consensus-clustering](https://github.com/theislab/multires-consensus-clustering) | 3 | 4 | 9 | 0 | | [theislab/nbconvertR](https://github.com/theislab/nbconvertR) | 3 | 3 | 1 | 2 | @@ -153,7 +154,6 @@ GitHub Dashboard | [theislab/gut_lineage](https://github.com/theislab/gut_lineage) | 2 | 3 | 0 | 3 | | [theislab/HPA_reproducibility](https://github.com/theislab/HPA_reproducibility) | 2 | 3 | 0 | 1 | | [theislab/HRCA-reproducibility](https://github.com/theislab/HRCA-reproducibility) | 2 | 4 | 0 | 1 | -| [theislab/jump-cpg0016-segmentation](https://github.com/theislab/jump-cpg0016-segmentation) | 2 | 0 | 0 | 0 | | [theislab/LineagePulse](https://github.com/theislab/LineagePulse) | 2 | 5 | 0 | 0 | | [theislab/multigrate_reproducibility](https://github.com/theislab/multigrate_reproducibility) | 2 | 1 | 0 | 0 | | [theislab/scanpy_squidpy_demo_2021](https://github.com/theislab/scanpy_squidpy_demo_2021) | 2 | 4 | 0 | 0 | @@ -195,7 +195,7 @@ GitHub Dashboard | [theislab/integraph](https://github.com/theislab/integraph) | 0 | 2 | 4 | 0 | | [theislab/ipsc_ipd_analysis](https://github.com/theislab/ipsc_ipd_analysis) | 0 | 3 | 0 | 0 | | [theislab/LungAgingAtlas](https://github.com/theislab/LungAgingAtlas) | 0 | 5 | 0 | 0 | -| [theislab/masterpraktikum_ssl_segmentation](https://github.com/theislab/masterpraktikum_ssl_segmentation) | 0 | 2 | 0 | 0 | +| [theislab/masterpraktikum_ssl_segmentation](https://github.com/theislab/masterpraktikum_ssl_segmentation) | 0 | 2 | 1 | 1 | | [theislab/MetaMap-web](https://github.com/theislab/MetaMap-web) | 0 | 4 | 2 | 0 | | [theislab/MRGR_stress_analysis](https://github.com/theislab/MRGR_stress_analysis) | 0 | 3 | 0 | 0 | | [theislab/multicpa-reproducibility](https://github.com/theislab/multicpa-reproducibility) | 0 | 2 | 0 | 0 | diff --git a/index.html b/index.html index 176dddf..0dba120 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

GitHub Dashboard


-2024-03-18 12:12:20 UTC

+2024-03-19 12:11:52 UTC

@@ -74,7 +74,7 @@

GitHub Dashboard

- + @@ -83,7 +83,7 @@

GitHub Dashboard

- + @@ -94,7 +94,7 @@

GitHub Dashboard

- + @@ -106,7 +106,7 @@

GitHub Dashboard

- + @@ -114,7 +114,7 @@

GitHub Dashboard

- + @@ -147,7 +147,7 @@

GitHub Dashboard

- + @@ -175,7 +175,7 @@

GitHub Dashboard

- + @@ -186,8 +186,8 @@

GitHub Dashboard

- - + + @@ -195,8 +195,8 @@

GitHub Dashboard

- - + + @@ -204,8 +204,8 @@

GitHub Dashboard

- - + + @@ -239,40 +239,37 @@

GitHub Dashboard

- + - + - + - - + + - + - + - - + + - + - + @@ -368,8 +365,8 @@

GitHub Dashboard

- - + + @@ -391,15 +388,6 @@

GitHub Dashboard

- - - - - - - - - @@ -408,7 +396,7 @@

GitHub Dashboard

- + @@ -418,26 +406,26 @@

GitHub Dashboard

- + - - + + - + - - + + - + @@ -447,7 +435,7 @@

GitHub Dashboard

- + @@ -456,7 +444,7 @@

GitHub Dashboard

- + @@ -465,7 +453,7 @@

GitHub Dashboard

- + @@ -501,7 +489,7 @@

Repos without Github Actions

- + @@ -529,7 +517,7 @@

Repos without Github Actions

- + @@ -550,7 +538,7 @@

Repos without Github Actions

- + @@ -571,10 +559,10 @@

Repos without Github Actions

- + - + @@ -815,40 +803,40 @@

Repos without Github Actions

+ + + + + + + - + - + - + - - - - - - - @@ -955,131 +943,145 @@

Repos without Github Actions

+ + + + + + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + + + + + + + + @@ -1200,433 +1202,426 @@

Repos without Github Actions

- - - - - - - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + diff --git a/repos.csv b/repos.csv index 4fab070..5a9f3d4 100644 --- a/repos.csv +++ b/repos.csv @@ -28,9 +28,9 @@ theislab,MRGR_stress_analysis,theislab/MRGR_stress_analysis,0,3,0,0,FALSE,https: theislab,MetaMap,theislab/MetaMap,11,7,0,8,FALSE,https://github.com/theislab/MetaMap,11,NA,NA,NA theislab,MetaMap-web,theislab/MetaMap-web,0,4,2,0,FALSE,https://github.com/theislab/MetaMap-web,0,NA,NA,NA theislab,PathReg,theislab/PathReg,8,3,0,0,FALSE,https://github.com/theislab/PathReg,8,NA,NA,NA -theislab,anndata2ri,theislab/anndata2ri,111,7,15,16,FALSE,https://github.com/theislab/anndata2ri,111,e88448273209b64350f41c40330d208fa0be0bf8,"[pre-commit.ci] pre-commit autoupdate (#161) +theislab,anndata2ri,theislab/anndata2ri,111,7,15,16,FALSE,https://github.com/theislab/anndata2ri,111,b9f76797d6e8efe307e0e3899f68cdf111446850,"[pre-commit.ci] pre-commit autoupdate (#162) -Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8277542950) +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8339966656) theislab,archmap_admin,theislab/archmap_admin,0,2,0,0,FALSE,https://github.com/theislab/archmap_admin,0,NA,NA,NA theislab,archmap_doc,theislab/archmap_doc,0,3,0,0,FALSE,https://github.com/theislab/archmap_doc,0,NA,NA,NA theislab,astrocytes_reprogramming_analysis,theislab/astrocytes_reprogramming_analysis,1,5,0,0,FALSE,https://github.com/theislab/astrocytes_reprogramming_analysis,1,NA,NA,NA @@ -58,7 +58,7 @@ theislab,batchglm,theislab/batchglm,26,3,46,9,FALSE,https://github.com/theislab/ theislab,bindome,theislab/bindome,1,3,5,1,FALSE,https://github.com/theislab/bindome,1,NA,NA,NA theislab,campa,theislab/campa,13,4,5,4,FALSE,https://github.com/theislab/campa,13,NA,NA,NA theislab,campa_ana,theislab/campa_ana,2,4,0,0,FALSE,https://github.com/theislab/campa_ana,2,NA,NA,NA -theislab,cellrank,theislab/cellrank,289,8,13,36,FALSE,https://github.com/theislab/cellrank,289,9069571a1806ba9336202ba8e580a12fbc6b6d1f,"Update state plotting (#1177) +theislab,cellrank,theislab/cellrank,290,8,13,36,FALSE,https://github.com/theislab/cellrank,290,9069571a1806ba9336202ba8e580a12fbc6b6d1f,"Update state plotting (#1177) * Update `TermStatesEstimator::_plot_discrete` @@ -95,26 +95,19 @@ theislab,dali,theislab/dali,0,7,0,1,FALSE,https://github.com/theislab/dali,0,NA, theislab,dca,theislab/dca,229,11,32,67,FALSE,https://github.com/theislab/dca,229,NA,NA,NA theislab,deepflow,theislab/deepflow,31,5,1,14,FALSE,https://github.com/theislab/deepflow,31,NA,NA,NA theislab,destiny,theislab/destiny,67,5,31,12,FALSE,https://github.com/theislab/destiny,67,300eb293fb773fb3d667818b946fdd3c62b0aa05,Fix sparse matrix cast and ggplot aes_string deprecations (#65),[![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) -theislab,diffxpy,theislab/diffxpy,168,6,106,23,FALSE,https://github.com/theislab/diffxpy,168,NA,NA,NA +theislab,diffxpy,theislab/diffxpy,169,6,106,23,FALSE,https://github.com/theislab/diffxpy,169,NA,NA,NA theislab,diffxpy_tutorials,theislab/diffxpy_tutorials,10,8,4,2,FALSE,https://github.com/theislab/diffxpy_tutorials,10,NA,NA,NA theislab,disent,theislab/disent,6,3,0,0,FALSE,https://github.com/theislab/disent,6,NA,NA,NA theislab,edgepy,theislab/edgepy,0,3,0,0,FALSE,https://github.com/theislab/edgepy,0,NA,NA,NA +theislab,ehrapy,theislab/ehrapy,106,6,41,14,FALSE,https://github.com/theislab/ehrapy,106,7ac35f88fca3c721f1f81a3ee615405d396184d6,"[pre-commit.ci] pre-commit autoupdate (#673) + +updates: +- [github.com/astral-sh/ruff-pre-commit: v0.3.2 → v0.3.3](https://github.com/astral-sh/ruff-pre-commit/compare/v0.3.2...v0.3.3) + +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8334272229) theislab,ehrapy,theislab/ehrapy,106,6,41,14,FALSE,https://github.com/theislab/ehrapy,106,84d33c8988ea560aa557fbe6a99b926befa84457,"Add test windows Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) -theislab,ehrapy,theislab/ehrapy,106,6,41,14,FALSE,https://github.com/theislab/ehrapy,106,d8d3f58dc027743e8e865608f0cbdea88f8967e6,"debug sa _regression model (#670) - -* debug sa _regression model - -* [pre-commit.ci] auto fixes from pre-commit.com hooks - -for more information, see https://pre-commit.ci - -* filter mimic_2 coloumns - ---------- - -Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8310776882) theislab,ehrapy,theislab/ehrapy,106,6,41,14,FALSE,https://github.com/theislab/ehrapy,106,ea6b4430d58d4ff8660eb15bd5db4d248f1c74ea,"Submodule Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/7260760638) @@ -123,9 +116,7 @@ theislab,ehrapy-datasets,theislab/ehrapy-datasets,5,2,0,2,FALSE,https://github.c theislab,ehrapy-reproducibility,theislab/ehrapy-reproducibility,0,2,0,0,FALSE,https://github.com/theislab/ehrapy-reproducibility,0,NA,NA,NA theislab,ehrapy-site,theislab/ehrapy-site,1,2,0,0,FALSE,https://github.com/theislab/ehrapy-site,1,NA,NA,NA theislab,ehrapy-tutorials,theislab/ehrapy-tutorials,5,3,3,2,FALSE,https://github.com/theislab/ehrapy-tutorials,5,NA,NA,NA -theislab,ehrdata,theislab/ehrdata,3,3,0,1,FALSE,https://github.com/theislab/ehrdata,3,069f05e4a142c10bcf4737998492f0fcb95384c4,"Merge pull request #9 from theislab/fix-pre-commit - -Update .pre-commit-config.yaml",[![](https://github.com/theislab/ehrdata/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8324843225) [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8324843226) +theislab,ehrdata,theislab/ehrdata,3,3,0,1,FALSE,https://github.com/theislab/ehrdata,3,7c0ffa31a91539ddec70258bb854da34ba98ef04,add quickstart tutorial notebook,[![](https://github.com/theislab/ehrdata/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8334566936) [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8334566937) theislab,enrichment_analysis_celltype,theislab/enrichment_analysis_celltype,9,5,0,4,FALSE,https://github.com/theislab/enrichment_analysis_celltype,9,NA,NA,NA theislab,epicardiods_analysis,theislab/epicardiods_analysis,2,2,1,0,FALSE,https://github.com/theislab/epicardiods_analysis,2,NA,NA,NA theislab,expiMap_reproducibility,theislab/expiMap_reproducibility,9,5,3,4,FALSE,https://github.com/theislab/expiMap_reproducibility,9,NA,NA,NA @@ -137,7 +128,7 @@ theislab,gastrulation_analysis,theislab/gastrulation_analysis,9,4,0,1,FALSE,http theislab,geome,theislab/geome,15,3,4,4,FALSE,https://github.com/theislab/geome,15,5bf0cd07b2ea7fa224a37f69232542a9e686c5bf,"Merge pull request #31 from theislab/template-update Automated template update from cookiecutter-scverse",[![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) -theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,9dfba4b52b14dbba6d12e8b18419f1fa75de1b82,[status] 2024-03-17 12:11:59 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8326153683) +theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,78503ab03722e6af81053747224b4313b23af89e,[status] 2024-03-18 12:12:42 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8342596751) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,graphcompass,theislab/graphcompass,9,1,0,0,FALSE,https://github.com/theislab/graphcompass,9,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) theislab,greatpy,theislab/greatpy,8,3,4,0,FALSE,https://github.com/theislab/greatpy,8,NA,NA,NA @@ -162,19 +153,17 @@ theislab,interaction-tools,theislab/interaction-tools,1,4,0,0,FALSE,https://gith theislab,interactive_plotting,theislab/interactive_plotting,21,4,11,7,FALSE,https://github.com/theislab/interactive_plotting,21,NA,NA,NA theislab,intercode,theislab/intercode,6,3,1,1,FALSE,https://github.com/theislab/intercode,6,NA,NA,NA theislab,ipsc_ipd_analysis,theislab/ipsc_ipd_analysis,0,3,0,0,FALSE,https://github.com/theislab/ipsc_ipd_analysis,0,NA,NA,NA -theislab,jump-cpg0016-segmentation,theislab/jump-cpg0016-segmentation,2,0,0,0,FALSE,https://github.com/theislab/jump-cpg0016-segmentation,2,NA,NA,NA +theislab,jump-cpg0016-segmentation,theislab/jump-cpg0016-segmentation,3,0,0,0,FALSE,https://github.com/theislab/jump-cpg0016-segmentation,3,NA,NA,NA theislab,kBET,theislab/kBET,138,8,7,23,FALSE,https://github.com/theislab/kBET,138,NA,NA,NA theislab,kbranches,theislab/kbranches,5,7,0,0,FALSE,https://github.com/theislab/kbranches,5,NA,NA,NA -theislab,masterpraktikum_ssl_segmentation,theislab/masterpraktikum_ssl_segmentation,0,2,0,0,FALSE,https://github.com/theislab/masterpraktikum_ssl_segmentation,0,NA,NA,NA -theislab,moscot,theislab/moscot,88,3,44,6,FALSE,https://github.com/theislab/moscot,88,6ea9a1612b829aaa4a1c192210e340a9c08d4ac6,"fix bug in quad problem marginals (#666) +theislab,masterpraktikum_ssl_segmentation,theislab/masterpraktikum_ssl_segmentation,0,2,1,1,FALSE,https://github.com/theislab/masterpraktikum_ssl_segmentation,0,NA,NA,NA +theislab,moscot,theislab/moscot,88,3,46,6,FALSE,https://github.com/theislab/moscot,88,6ea9a1612b829aaa4a1c192210e340a9c08d4ac6,"fix bug in quad problem marginals (#666) Co-authored-by: Dominik Klein ",[![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) theislab,moscot-framework_reproducibility,theislab/moscot-framework_reproducibility,1,2,1,0,FALSE,https://github.com/theislab/moscot-framework_reproducibility,1,NA,NA,NA theislab,moscot_benchmarks,theislab/moscot_benchmarks,1,2,1,0,FALSE,https://github.com/theislab/moscot_benchmarks,1,NA,NA,NA theislab,moscot_not,theislab/moscot_not,3,2,8,1,FALSE,https://github.com/theislab/moscot_not,3,NA,NA,NA -theislab,moscot_notebooks,theislab/moscot_notebooks,6,1,2,2,FALSE,https://github.com/theislab/moscot_notebooks,6,47ec2fb986a7781ff2b43ecb90120c9a4c46df75,"fgw instead of gw (#67) - -Co-authored-by: Arina Danilina ",[![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/8319362315) +theislab,moscot_notebooks,theislab/moscot_notebooks,6,1,3,2,FALSE,https://github.com/theislab/moscot_notebooks,6,NA,NA,NA theislab,moslin,theislab/moslin,9,1,0,1,FALSE,https://github.com/theislab/moslin,9,NA,NA,NA theislab,mouse_cross-condition_pancreatic_islet_atlas,theislab/mouse_cross-condition_pancreatic_islet_atlas,7,2,0,3,FALSE,https://github.com/theislab/mouse_cross-condition_pancreatic_islet_atlas,7,NA,NA,NA theislab,mubind,theislab/mubind,19,3,30,0,FALSE,https://github.com/theislab/mubind,19,NA,NA,NA @@ -190,31 +179,22 @@ update docs and python versions",[![](https://github.com/theislab/ncem/workflows theislab,ncem,theislab/ncem,96,6,24,13,FALSE,https://github.com/theislab/ncem,96,d03a0792b9ab6ea62d2715b57ce50fcf1a84967c,remove patsy dependency,[![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) theislab,ncem_benchmarks,theislab/ncem_benchmarks,8,4,4,2,FALSE,https://github.com/theislab/ncem_benchmarks,8,NA,NA,NA theislab,ncem_tutorials,theislab/ncem_tutorials,10,4,5,0,FALSE,https://github.com/theislab/ncem_tutorials,10,NA,NA,NA -theislab,neural_organoid_atlas,theislab/neural_organoid_atlas,8,4,2,1,FALSE,https://github.com/theislab/neural_organoid_atlas,8,NA,NA,NA +theislab,neural_organoid_atlas,theislab/neural_organoid_atlas,9,4,2,1,FALSE,https://github.com/theislab/neural_organoid_atlas,9,NA,NA,NA theislab,organoid_dexamethason_stimulation,theislab/organoid_dexamethason_stimulation,0,3,0,1,FALSE,https://github.com/theislab/organoid_dexamethason_stimulation,0,NA,NA,NA theislab,paga,theislab/paga,182,10,21,31,FALSE,https://github.com/theislab/paga,182,NA,NA,NA theislab,pancreas-targeted_pharmacology,theislab/pancreas-targeted_pharmacology,0,7,0,2,FALSE,https://github.com/theislab/pancreas-targeted_pharmacology,0,NA,NA,NA theislab,pancreatic-endocrinogenesis,theislab/pancreatic-endocrinogenesis,4,3,0,5,FALSE,https://github.com/theislab/pancreatic-endocrinogenesis,4,NA,NA,NA theislab,pdac_analysis,theislab/pdac_analysis,0,1,0,0,FALSE,https://github.com/theislab/pdac_analysis,0,NA,NA,NA -theislab,pertpy,theislab/pertpy,78,4,29,15,FALSE,https://github.com/theislab/pertpy,78,54b7f30d58905fa4e7ad83c4229281072e72b661,"Fix nox - -Signed-off-by: zethson ",[![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) -theislab,pertpy,theislab/pertpy,78,4,29,15,FALSE,https://github.com/theislab/pertpy,78,916c8379eb97b0ad19460115b7497ead38dd33a9,"[pre-commit.ci] pre-commit autoupdate (#558) +theislab,pertpy,theislab/pertpy,79,4,31,15,FALSE,https://github.com/theislab/pertpy,79,389bf45c44074b28f0ee457b032f7df70a240511,"[pre-commit.ci] pre-commit autoupdate (#561) -* [pre-commit.ci] pre-commit autoupdate - updates: -- [github.com/astral-sh/ruff-pre-commit: v0.3.0 → v0.3.2](https://github.com/astral-sh/ruff-pre-commit/compare/v0.3.0...v0.3.2) -- [github.com/pre-commit/mirrors-mypy: v1.8.0 → v1.9.0](https://github.com/pre-commit/mirrors-mypy/compare/v1.8.0...v1.9.0) - -* [pre-commit.ci] auto fixes from pre-commit.com hooks +- [github.com/astral-sh/ruff-pre-commit: v0.3.2 → v0.3.3](https://github.com/astral-sh/ruff-pre-commit/compare/v0.3.2...v0.3.3) -for more information, see https://pre-commit.ci - ---------- - -Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150458) [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150441) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150453) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8262150461) -theislab,pertpy,theislab/pertpy,78,4,29,15,FALSE,https://github.com/theislab/pertpy,78,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8334269835) +theislab,pertpy,theislab/pertpy,79,4,31,15,FALSE,https://github.com/theislab/pertpy,79,54b7f30d58905fa4e7ad83c4229281072e72b661,"Fix nox + +Signed-off-by: zethson ",[![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) +theislab,pertpy,theislab/pertpy,79,4,31,15,FALSE,https://github.com/theislab/pertpy,79,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) theislab,pertpy-datasets,theislab/pertpy-datasets,1,3,1,1,FALSE,https://github.com/theislab/pertpy-datasets,1,NA,NA,NA theislab,pertpy-tutorials,theislab/pertpy-tutorials,4,4,2,7,FALSE,https://github.com/theislab/pertpy-tutorials,4,NA,NA,NA theislab,perturbation-metrics,theislab/perturbation-metrics,4,2,1,0,FALSE,https://github.com/theislab/perturbation-metrics,4,NA,NA,NA @@ -222,7 +202,7 @@ theislab,pseudodynamics,theislab/pseudodynamics,39,7,0,6,FALSE,https://github.co theislab,reproducability_AutoGeneS,theislab/reproducability_AutoGeneS,0,3,0,0,FALSE,https://github.com/theislab/reproducability_AutoGeneS,0,NA,NA,NA theislab,reproducibility_AutoGeneS,theislab/reproducibility_AutoGeneS,0,3,0,0,FALSE,https://github.com/theislab/reproducibility_AutoGeneS,0,NA,NA,NA theislab,sc-best-practices-ce,theislab/sc-best-practices-ce,8,8,2,3,FALSE,https://github.com/theislab/sc-best-practices-ce,8,NA,NA,NA -theislab,sc-pert,theislab/sc-pert,122,6,6,10,FALSE,https://github.com/theislab/sc-pert,122,NA,NA,NA +theislab,sc-pert,theislab/sc-pert,123,6,6,10,FALSE,https://github.com/theislab/sc-pert,123,NA,NA,NA theislab,scAnalysisTutorial,theislab/scAnalysisTutorial,10,3,0,3,FALSE,https://github.com/theislab/scAnalysisTutorial,10,NA,NA,NA theislab,scArches-reproducibility,theislab/scArches-reproducibility,31,5,5,0,FALSE,https://github.com/theislab/scArches-reproducibility,31,NA,NA,NA theislab,scCODA,theislab/scCODA,128,9,8,23,FALSE,https://github.com/theislab/scCODA,128,NA,NA,NA @@ -238,9 +218,9 @@ theislab,scanpy-in-R,theislab/scanpy-in-R,13,3,1,0,FALSE,https://github.com/thei theislab,scanpy.org,theislab/scanpy.org,0,7,1,0,FALSE,https://github.com/theislab/scanpy.org,0,NA,NA,NA theislab,scanpy_neighbors,theislab/scanpy_neighbors,0,3,0,1,FALSE,https://github.com/theislab/scanpy_neighbors,0,NA,NA,NA theislab,scanpy_squidpy_demo_2021,theislab/scanpy_squidpy_demo_2021,2,4,0,0,FALSE,https://github.com/theislab/scanpy_squidpy_demo_2021,2,NA,NA,NA -theislab,scanpydoc,theislab/scanpydoc,12,6,3,5,FALSE,https://github.com/theislab/scanpydoc,12,7664dad65d0e34d24b978245203d8d0521f54233,"[pre-commit.ci] pre-commit autoupdate (#141) +theislab,scanpydoc,theislab/scanpydoc,12,6,3,5,FALSE,https://github.com/theislab/scanpydoc,12,bb52063ee40597b36bd79c6787ab0844823e4dc9,"[pre-commit.ci] pre-commit autoupdate (#142) -Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8277549254) +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8339964270) theislab,scarches,theislab/scarches,299,14,36,48,FALSE,https://github.com/theislab/scarches,299,NA,NA,NA theislab,scarches_notebooks,theislab/scarches_notebooks,0,3,0,0,FALSE,https://github.com/theislab/scarches_notebooks,0,NA,NA,NA theislab,scatac_poisson_reproducibility,theislab/scatac_poisson_reproducibility,6,3,0,0,FALSE,https://github.com/theislab/scatac_poisson_reproducibility,6,NA,NA,NA @@ -255,11 +235,11 @@ theislab,scib,theislab/scib,259,16,37,56,FALSE,https://github.com/theislab/scib, * set minimum python version to 3.8",[![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/7468185443) theislab,scib-pipeline,theislab/scib-pipeline,54,7,16,26,FALSE,https://github.com/theislab/scib-pipeline,54,1180bcb35829d6d2984202268b4d1d11c511e20c,Merge branch 'fix/igraph_dependency' into rpy2_unpin,[![](https://github.com/theislab/scib-pipeline/workflows/Manual%20workflow/badge.svg)](https://github.com/theislab/scib-pipeline/actions/runs/4118363146) theislab,scib-reproducibility,theislab/scib-reproducibility,49,6,3,15,FALSE,https://github.com/theislab/scib-reproducibility,49,NA,NA,NA -theislab,scvelo,theislab/scvelo,382,13,55,101,FALSE,https://github.com/theislab/scvelo,382,b2f31b345641efdccd39fbcb8c0beaa0014b4b88,"Update `pyproject.toml` (#1226) +theislab,scvelo,theislab/scvelo,382,13,55,100,FALSE,https://github.com/theislab/scvelo,382,b2f31b345641efdccd39fbcb8c0beaa0014b4b88,"Update `pyproject.toml` (#1226) Fix package directory.",[![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317739547) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317739551) [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) theislab,scvelo_notebooks,theislab/scvelo_notebooks,26,2,2,12,FALSE,https://github.com/theislab/scvelo_notebooks,26,NA,NA,NA -theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8319269048) +theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8335355839) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,5fcf932c44613e6bf4063ef3075ad6062bf5d9a1,round restored counts in some affected datasets,[![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,ceb14c946f699c38d18a32192b76d4639caf845e,fix download links,[![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) theislab,sfaira-portal,theislab/sfaira-portal,0,4,2,0,FALSE,https://github.com/theislab/sfaira-portal,0,NA,NA,NA @@ -267,13 +247,13 @@ theislab,sfaira-site,theislab/sfaira-site,0,4,0,0,FALSE,https://github.com/theis theislab,sfaira_benchmarks,theislab/sfaira_benchmarks,0,3,0,0,FALSE,https://github.com/theislab/sfaira_benchmarks,0,NA,NA,NA theislab,sfaira_extension,theislab/sfaira_extension,0,3,1,0,FALSE,https://github.com/theislab/sfaira_extension,0,NA,NA,NA theislab,sfaira_tutorials,theislab/sfaira_tutorials,6,4,3,2,FALSE,https://github.com/theislab/sfaira_tutorials,6,NA,NA,NA -theislab,single-cell-best-practices,theislab/single-cell-best-practices,606,16,50,133,FALSE,https://github.com/theislab/single-cell-best-practices,606,2e0a1f475d614c86bdc91c8544870e702f67c38e,"Update differential_gene_expression.ipynb (#256) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,607,16,50,133,FALSE,https://github.com/theislab/single-cell-best-practices,607,2e0a1f475d614c86bdc91c8544870e702f67c38e,"Update differential_gene_expression.ipynb (#256) Corrected typographical and grammatical errors.",[![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) -theislab,single-cell-best-practices,theislab/single-cell-best-practices,606,16,50,133,FALSE,https://github.com/theislab/single-cell-best-practices,606,83f34dabe86da58240a9d08e118c2f8a8dc99079,"Update raw_data_processing.md +theislab,single-cell-best-practices,theislab/single-cell-best-practices,607,16,50,133,FALSE,https://github.com/theislab/single-cell-best-practices,607,83f34dabe86da58240a9d08e118c2f8a8dc99079,"Update raw_data_processing.md avoid missing piscem path during index generation",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920583) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920585) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7832920584) -theislab,single-cell-best-practices,theislab/single-cell-best-practices,606,16,50,133,FALSE,https://github.com/theislab/single-cell-best-practices,606,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,607,16,50,133,FALSE,https://github.com/theislab/single-cell-best-practices,607,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) * scATAC_pp @@ -387,8 +367,8 @@ Signed-off-by: zethson Co-authored-by: xlancelottx Co-authored-by: zethson Co-authored-by: Anna Schaar ",[![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) -theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,62,3,0,8,FALSE,https://github.com/theislab/single-cell-transformer-papers,62,NA,NA,NA -theislab,single-cell-tutorial,theislab/single-cell-tutorial,1268,30,21,437,FALSE,https://github.com/theislab/single-cell-tutorial,1268,NA,NA,NA +theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,63,3,0,9,FALSE,https://github.com/theislab/single-cell-transformer-papers,63,NA,NA,NA +theislab,single-cell-tutorial,theislab/single-cell-tutorial,1271,30,21,437,FALSE,https://github.com/theislab/single-cell-tutorial,1271,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,3,5,5,3,FALSE,https://github.com/theislab/singlecell_proteomics,3,NA,NA,NA theislab,spapros,theislab/spapros,21,3,15,5,FALSE,https://github.com/theislab/spapros,21,642fb34d2ccbb1bb8730b239840bf1bfe06701f8,"[DEPENDABOT]: Bump importlib-resources from 5.12.0 to 6.1.1 in /docs @@ -428,4 +408,4 @@ theislab,transcription_factor_activity,theislab/transcription_factor_activity,1, theislab,trvaep,theislab/trvaep,9,3,0,4,FALSE,https://github.com/theislab/trvaep,9,NA,NA,NA theislab,unbalanced_monge_maps_single_cell,theislab/unbalanced_monge_maps_single_cell,1,0,0,0,FALSE,https://github.com/theislab/unbalanced_monge_maps_single_cell,1,NA,NA,NA theislab,zebrafish_bipolarity,theislab/zebrafish_bipolarity,1,4,0,1,FALSE,https://github.com/theislab/zebrafish_bipolarity,1,NA,NA,NA -theislab,zellkonverter,theislab/zellkonverter,123,6,21,24,FALSE,https://github.com/theislab/zellkonverter,123,9d557f853af45c84b64e26fd39a41c0a8c06992e,Update Roxygen to v7.3.0,[![](https://github.com/theislab/zellkonverter/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/7558891230) +theislab,zellkonverter,theislab/zellkonverter,123,6,22,24,FALSE,https://github.com/theislab/zellkonverter,123,9d557f853af45c84b64e26fd39a41c0a8c06992e,Update Roxygen to v7.3.0,[![](https://github.com/theislab/zellkonverter/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/7558891230)
theislab/single-cell-best-practices606607 16 50 133
theislab/single-cell-best-practices606607 16 50 133
theislab/single-cell-best-practices606607 16 50 133 382 13 55101100
theislab/cellrank289290 8 13 36 8 166 13 55bcbb
theislab/zellkonverter 123 62122 24 9d557f 7 15 16e88448b9f767
theislab/ehrapy 6 41 1484d33c7ac35f
theislab/ehrapy 6 41 14d8d3f584d33c
theislab/ehrapy theislab/moscot 88 34446 6 6ea9a1
theislab/pertpy7879 42931 15 - - -54b7f3389bf4
theislab/pertpy7879 42931 15 - - -916c83 + + +54b7f3
theislab/pertpy7879 42931 15 d00c5f 6 3 57664dabb5206
theislab/graphcompass 677784
theislab/moscot_notebooks612247ec2f
theislab/ehrapy-datasets 5 2 cb7707
theislab/cellrank2_reproducibility 4 1 f5c767
theislab/ehrdata 3 3 0 1 -069f05 +7c0ffa
theislab/gh-dashboard 1 2 0 09dfba478503a
theislab/transcription_factor_activity 1 1 ced39f
theislab/idtrack 0 1 12aa73
theislab/idtrack 0 1 63e94a
theislab/idtrack 0 1
theislab/single-cell-tutorial12681271 30 21 437
theislab/diffxpy168169 6 106 23
theislab/sc-pert122123 6 6 10
theislab/single-cell-transformer-papers6263 3 089
theislab/AutoGeneS 1
theislab/neural_organoid_atlas9421
theislab/superexacttestpy 9 2 3 0
theislab/trvaep 9 3 0 4
theislab/greatpy 8 3 4 0
theislab/ncem_benchmarks 8 4 4 2
theislab/neural_organoid_atlas8421
theislab/PathReg 8 1
theislab/moscot_notebooks6132
theislab/scatac_poisson_reproducibility 6 3 0 0
theislab/sfaira_tutorials 6 4 3 2
theislab/trVAE_reproducibility 6 3 2 5
theislab/2018_Angelidis 5 5 0 6
theislab/ehrapy-tutorials 5 3 3 2
theislab/flowVI 5 3 0 0
theislab/InterpretableAutoencoders 5 5 0 1
theislab/kbranches 5 7 0 0
theislab/scanpy-demo-czbiohub 5 5 0 5
theislab/cellrank_reproducibility_preprint 4 2 0 0
theislab/extended-single-cell-best-practices-container 4 4 2 1
theislab/feature-attribution-sc 4 2 8 1
theislab/LODE 4 2 9 0
theislab/pancreatic-endocrinogenesis 4 3 0 5
theislab/pertpy-tutorials 4 4 2 7
theislab/perturbation-metrics 4 2 1 0
theislab/2022_Tritschler_pancreas_cross_species 3 3 0 1
theislab/covid-perturbation 3 3 0 0
theislab/jump-cpg0016-segmentation3000
theislab/moscot_not 3 1
theislab/jump-cpg0016-segmentation2000
theislab/LineagePulse 2 5 0 0
theislab/multigrate_reproducibility 2 1 0 0
theislab/scanpy_squidpy_demo_2021 2 4 0 0
theislab/svaeligr 2 3 0 0
theislab/2021_PRMT7_regulates_Monocyte_Extravasation 1 4 0 2
theislab/astrocytes_reprogramming_analysis 1 5 0 0
theislab/autoencoderPS 1 3 0 2
theislab/bartSeq 1 5 1 5
theislab/bindome 1 3 5 1
theislab/countae 1 4 0 0
theislab/ehrapy-cli 1 3 0 0
theislab/ehrapy-site 1 2 0 0
theislab/ifcseq 1 3 0 1
theislab/interaction-tools 1 4 0 0
theislab/LungInjuryRegeneration 1 8 0 0
theislab/moscot-framework_reproducibility 1 2 1 0
theislab/moscot_benchmarks 1 2 1 0
theislab/pertpy-datasets 1 3 1 1
theislab/scPoli_legacy 1 5 0 0
theislab/spatial_atlas_ssl 1 2 0 0
theislab/tissue_reproducibility 1 3 0 0
theislab/unbalanced_monge_maps_single_cell 1 0 0 0
theislab/zebrafish_bipolarity 1 4 0 1
theislab/2015-grn-inference 0 1 0 0
theislab/2020_Inhibition_LTbetaR-signalling 0 4 0 3
theislab/2022_Bakhti_pancreas_Syt13 0 3 0 0
theislab/archmap_admin 0 2 0 0
theislab/archmap_doc 0 3 0 0
theislab/atlas-feature-selection-benchmark 0 2 0 0
theislab/collideseq_reproducibility 0 2 0 0
theislab/consensus-clustering-evaluation 0 4 0 0
theislab/dali 0 7 0 1
theislab/edgepy 0 3 0 0
theislab/ehrapy-reproducibility 0 2 0 0
theislab/ELS_analysis 0 2 0 0
theislab/GoBI_single_cell 0 3 0 0
theislab/hadge-reproducibility 0 2 0 0
theislab/icml_cbw_2022_clcvae 0 3 0 0
theislab/integraph 0 2 4 0
theislab/ipsc_ipd_analysis 0 3 0 0
theislab/LungAgingAtlas 0 5 0 0
theislab/masterpraktikum_ssl_segmentation 0 20011
theislab/MetaMap-web 0 4 2 0
theislab/MRGR_stress_analysis 0 3 0 0
theislab/multicpa-reproducibility 0 2 0 0
theislab/organoid_dexamethason_stimulation 0 3 0 1
theislab/pancreas-targeted_pharmacology 0 7 0 2
theislab/pdac_analysis 0 1 0 0
theislab/reproducability_AutoGeneS 0 3 0 0
theislab/reproducibility_AutoGeneS 0 3 0 0
theislab/scanpy.org 0 7 1 0
theislab/scanpy_neighbors 0 3 0 1
theislab/scarches_notebooks 0 3 0 0
theislab/sc_ketamine_analysis 0 4 0 0
theislab/sfaira-portal 0 4 2 0
theislab/sfaira-site 0 4 0 0
theislab/sfaira_benchmarks 0 3 0 0
theislab/sfaira_extension 0 3 1 0
theislab/spapros-smk 0 2 0 1
theislab/spapros_reproducibility 0 1 0 0
theislab/tissue 0 3