From b1a699a51115b977752cb13c7d34f3e2a00db616 Mon Sep 17 00:00:00 2001 From: GitHub Actions Date: Sun, 7 Jan 2024 12:13:02 +0000 Subject: [PATCH] [status] 2024-01-07 12:13:02 UTC --- README.md | 24 +++++++------- index.html | 91 ++++++++++++++++++++++++++++-------------------------- repos.csv | 24 +++++++------- 3 files changed, 72 insertions(+), 67 deletions(-) diff --git a/README.md b/README.md index 885d3e1..deb8e7e 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-01-06 12:10:20 UTC +2024-01-07 12:10:25 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| @@ -13,7 +13,7 @@ GitHub Dashboard | [theislab/cellrank](https://github.com/theislab/cellrank) | 280 | 7 | 10 | 35 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/7373534946) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/7373588042) | cabbd3 | | [theislab/scib](https://github.com/theislab/scib) | 247 | 17 | 33 | 55 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/5655324075) | ed3e28 | | [theislab/scgen](https://github.com/theislab/scgen) | 235 | 9 | 20 | 51 | [![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) | d79e1f | -| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7427993114) | 55bcbb | +| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7434736190) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | | [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 112 | 6 | 18 | 22 | [![](https://github.com/theislab/zellkonverter/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/6848353013) | a36390 | @@ -24,15 +24,15 @@ GitHub Dashboard | [theislab/ehrapy](https://github.com/theislab/ehrapy) | 89 | 7 | 33 | 9 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | | [theislab/ehrapy](https://github.com/theislab/ehrapy) | 89 | 7 | 33 | 9 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/7260760638) | ea6b44 | | [theislab/moscot](https://github.com/theislab/moscot) | 78 | 3 | 43 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/6456571831) | b23360 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/4629618853) | \” title=“Revert”Deleted JaxscgenPlot”“\>404835 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7431067256) | 83c035 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 26 | 15 | [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/4629618853) | \” title=“Revert”Deleted JaxscgenPlot”“\>404835 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 26 | 15 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873448) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873447) [![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873443) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873442) | 5cc698 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 26 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | | [theislab/destiny](https://github.com/theislab/destiny) | 66 | 5 | 30 | 11 | [![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) | 300eb2 | | [theislab/scib-pipeline](https://github.com/theislab/scib-pipeline) | 45 | 7 | 14 | 26 | [![](https://github.com/theislab/scib-pipeline/workflows/Manual%20workflow/badge.svg)](https://github.com/theislab/scib-pipeline/actions/runs/4118363146) | 1180bc | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825767) [![](https://github.com/theislab/batchglm/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825761) | 11ffbb | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4898948664) | b893fd | | [theislab/spapros](https://github.com/theislab/spapros) | 20 | 3 | 15 | 5 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088652) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088648) | 642fb3 | -| [theislab/spapros](https://github.com/theislab/spapros) | 20 | 3 | 15 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7428525456) | c4c090 | +| [theislab/spapros](https://github.com/theislab/spapros) | 20 | 3 | 15 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7435203951) | c4c090 | | [theislab/hadge](https://github.com/theislab/hadge) | 14 | 3 | 4 | 3 | [![](https://github.com/theislab/hadge/workflows/hadge%20test%20workflow/badge.svg)](https://github.com/theislab/hadge/actions/runs/7011486133) | 94067f | | [theislab/hadge](https://github.com/theislab/hadge) | 14 | 3 | 4 | 3 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7010930207) | e3c949 | | [theislab/geome](https://github.com/theislab/geome) | 13 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/7048149542) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/7048149538) | 0dda80 | @@ -44,7 +44,7 @@ GitHub Dashboard | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 3 | 1 | 0 | 0 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/7102882080) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/7102882073) | 9ab01c | | [theislab/ehrdata](https://github.com/theislab/ehrdata) | 2 | 3 | 3 | 1 | [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/7375059402) | ec2924 | | [theislab/bindome](https://github.com/theislab/bindome) | 1 | 3 | 5 | 1 | [![](https://github.com/theislab/bindome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/bindome/actions/runs/3619252866) [![](https://github.com/theislab/bindome/workflows/Test/badge.svg)](https://github.com/theislab/bindome/actions/runs/3619252869) | 3cb12b | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7431414384) | 625890 | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7438042006) | c3c4ed | | [theislab/transcription_factor_activity](https://github.com/theislab/transcription_factor_activity) | 1 | 1 | 5 | 1 | [![](https://github.com/theislab/transcription_factor_activity/workflows/Check%20Build/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287206) [![](https://github.com/theislab/transcription_factor_activity/workflows/Test/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287208) | ced39f | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Labeler/badge.svg)](https://github.com/theislab/idtrack/actions/runs/5369045662) | 12aa73 | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/idtrack/actions/runs/6140914377) [![](https://github.com/theislab/idtrack/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/idtrack/actions/runs/6140914379) | 1f47f4 | @@ -54,13 +54,13 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1228 | 30 | 19 | 432 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1229 | 30 | 19 | 432 | | [theislab/scarches](https://github.com/theislab/scarches) | 295 | 14 | 34 | 48 | | [theislab/dca](https://github.com/theislab/dca) | 227 | 11 | 31 | 67 | | [theislab/paga](https://github.com/theislab/paga) | 176 | 10 | 21 | 30 | | [theislab/diffxpy](https://github.com/theislab/diffxpy) | 169 | 6 | 106 | 22 | | [theislab/kBET](https://github.com/theislab/kBET) | 138 | 9 | 8 | 23 | -| [theislab/scCODA](https://github.com/theislab/scCODA) | 123 | 9 | 11 | 21 | +| [theislab/scCODA](https://github.com/theislab/scCODA) | 123 | 9 | 12 | 21 | | [theislab/sc-pert](https://github.com/theislab/sc-pert) | 117 | 6 | 6 | 10 | | [theislab/chemCPA](https://github.com/theislab/chemCPA) | 80 | 4 | 10 | 22 | | [theislab/cpa](https://github.com/theislab/cpa) | 64 | 4 | 12 | 13 | @@ -74,9 +74,9 @@ GitHub Dashboard | [theislab/deepflow](https://github.com/theislab/deepflow) | 28 | 5 | 1 | 14 | | [theislab/DeepRT](https://github.com/theislab/DeepRT) | 26 | 2 | 11 | 10 | | [theislab/graph_abstraction](https://github.com/theislab/graph_abstraction) | 26 | 8 | 0 | 10 | +| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 25 | 2 | 0 | 2 | | [theislab/Covid_meta_analysis](https://github.com/theislab/Covid_meta_analysis) | 24 | 8 | 2 | 11 | | [theislab/scvelo_notebooks](https://github.com/theislab/scvelo_notebooks) | 24 | 2 | 2 | 12 | -| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 24 | 2 | 0 | 2 | | [theislab/interactive_plotting](https://github.com/theislab/interactive_plotting) | 20 | 4 | 10 | 7 | | [theislab/mubind](https://github.com/theislab/mubind) | 19 | 3 | 30 | 0 | | [theislab/scTab](https://github.com/theislab/scTab) | 19 | 2 | 2 | 3 | @@ -93,11 +93,11 @@ GitHub Dashboard | [theislab/GWAS-scRNAseq-Integration](https://github.com/theislab/GWAS-scRNAseq-Integration) | 10 | 5 | 0 | 12 | | [theislab/ncem_tutorials](https://github.com/theislab/ncem_tutorials) | 10 | 4 | 5 | 0 | | [theislab/scAnalysisTutorial](https://github.com/theislab/scAnalysisTutorial) | 10 | 3 | 0 | 3 | +| [theislab/cross_system_integration](https://github.com/theislab/cross_system_integration) | 9 | 2 | 10 | 0 | | [theislab/enrichment_analysis_celltype](https://github.com/theislab/enrichment_analysis_celltype) | 9 | 5 | 0 | 4 | | [theislab/moslin](https://github.com/theislab/moslin) | 9 | 1 | 0 | 1 | | [theislab/superexacttestpy](https://github.com/theislab/superexacttestpy) | 9 | 2 | 3 | 0 | | [theislab/trvaep](https://github.com/theislab/trvaep) | 9 | 3 | 0 | 4 | -| [theislab/cross_system_integration](https://github.com/theislab/cross_system_integration) | 8 | 2 | 10 | 0 | | [theislab/expiMap_reproducibility](https://github.com/theislab/expiMap_reproducibility) | 8 | 5 | 3 | 4 | | [theislab/greatpy](https://github.com/theislab/greatpy) | 8 | 3 | 4 | 0 | | [theislab/inVAE](https://github.com/theislab/inVAE) | 8 | 3 | 0 | 1 | @@ -117,6 +117,7 @@ GitHub Dashboard | [theislab/theislab.github.io](https://github.com/theislab/theislab.github.io) | 7 | 2 | 9 | 0 | | [theislab/IMPA](https://github.com/theislab/IMPA) | 6 | 2 | 0 | 1 | | [theislab/intercode](https://github.com/theislab/intercode) | 6 | 3 | 1 | 1 | +| [theislab/neural_organoid_atlas](https://github.com/theislab/neural_organoid_atlas) | 6 | 3 | 0 | 1 | | [theislab/scatac_poisson_reproducibility](https://github.com/theislab/scatac_poisson_reproducibility) | 6 | 3 | 0 | 0 | | [theislab/sfaira_tutorials](https://github.com/theislab/sfaira_tutorials) | 6 | 4 | 3 | 2 | | [theislab/trVAE_reproducibility](https://github.com/theislab/trVAE_reproducibility) | 6 | 3 | 2 | 4 | @@ -125,7 +126,6 @@ GitHub Dashboard | [theislab/ehrapy-tutorials](https://github.com/theislab/ehrapy-tutorials) | 5 | 3 | 1 | 2 | | [theislab/InterpretableAutoencoders](https://github.com/theislab/InterpretableAutoencoders) | 5 | 5 | 0 | 1 | | [theislab/kbranches](https://github.com/theislab/kbranches) | 5 | 7 | 0 | 0 | -| [theislab/neural_organoid_atlas](https://github.com/theislab/neural_organoid_atlas) | 5 | 3 | 0 | 1 | | [theislab/scanpy-demo-czbiohub](https://github.com/theislab/scanpy-demo-czbiohub) | 5 | 5 | 0 | 5 | | [theislab/cellrank_reproducibility_preprint](https://github.com/theislab/cellrank_reproducibility_preprint) | 4 | 2 | 0 | 0 | | [theislab/extended-single-cell-best-practices-container](https://github.com/theislab/extended-single-cell-best-practices-container) | 4 | 4 | 2 | 1 | diff --git a/index.html b/index.html index cbe5c11..c20a902 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

GitHub Dashboard


-2024-01-06 12:11:43 UTC

+2024-01-07 12:12:39 UTC

@@ -147,7 +147,7 @@

GitHub Dashboard

- + @@ -252,7 +252,7 @@

GitHub Dashboard

- + - + - - + + - + @@ -330,7 +333,7 @@

GitHub Dashboard

+ @@ -441,8 +444,8 @@

GitHub Dashboard

- - + + @@ -505,7 +508,7 @@

Repos without Github Actions

- + @@ -549,7 +552,7 @@

Repos without Github Actions

- + @@ -644,26 +647,26 @@

Repos without Github Actions

+ + + + + + + - + - - - - - - - @@ -777,40 +780,40 @@

Repos without Github Actions

+ + + + + + + - + - + - + - - - - - - - @@ -945,68 +948,68 @@

Repos without Github Actions

+ + + + + + + - + - + - + - + - + - + - + - - - - - - - diff --git a/repos.csv b/repos.csv index 2aa1248..02cab3e 100644 --- a/repos.csv +++ b/repos.csv @@ -84,7 +84,7 @@ theislab,covid-perturbation,theislab/covid-perturbation,3,3,0,0,FALSE,https://gi theislab,covid_macrophages_integration,theislab/covid_macrophages_integration,2,5,0,4,FALSE,https://github.com/theislab/covid_macrophages_integration,2,NA,NA,NA theislab,cpa,theislab/cpa,64,4,12,13,FALSE,https://github.com/theislab/cpa,64,NA,NA,NA theislab,cpa-reproducibility,theislab/cpa-reproducibility,7,3,0,1,FALSE,https://github.com/theislab/cpa-reproducibility,7,NA,NA,NA -theislab,cross_system_integration,theislab/cross_system_integration,8,2,10,0,FALSE,https://github.com/theislab/cross_system_integration,8,NA,NA,NA +theislab,cross_system_integration,theislab/cross_system_integration,9,2,10,0,FALSE,https://github.com/theislab/cross_system_integration,9,NA,NA,NA theislab,dali,theislab/dali,0,7,0,1,FALSE,https://github.com/theislab/dali,0,NA,NA,NA theislab,dca,theislab/dca,227,11,31,67,FALSE,https://github.com/theislab/dca,227,NA,NA,NA theislab,deepflow,theislab/deepflow,28,5,1,14,FALSE,https://github.com/theislab/deepflow,28,NA,NA,NA @@ -129,7 +129,7 @@ API Update, Transform and ToIterable classes.",[![](https://github.com/theislab/ theislab,geome,theislab/geome,13,3,4,4,FALSE,https://github.com/theislab/geome,13,5bf0cd07b2ea7fa224a37f69232542a9e686c5bf,"Merge pull request #31 from theislab/template-update Automated template update from cookiecutter-scverse",[![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) -theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,62589063f9dcc4f7f54e42445fa9fff5c5456b99,[status] 2024-01-05 12:11:24 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7431414384) +theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,c3c4ed0da8e8ab262748160a8a70a15723ff2265,[status] 2024-01-06 12:11:51 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7438042006) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,greatpy,theislab/greatpy,8,3,4,0,FALSE,https://github.com/theislab/greatpy,8,NA,NA,NA theislab,gut_lineage,theislab/gut_lineage,2,3,0,3,FALSE,https://github.com/theislab/gut_lineage,2,NA,NA,NA @@ -196,16 +196,18 @@ update docs and python versions",[![](https://github.com/theislab/ncem/workflows theislab,ncem,theislab/ncem,94,6,23,11,FALSE,https://github.com/theislab/ncem,94,d03a0792b9ab6ea62d2715b57ce50fcf1a84967c,remove patsy dependency,[![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) theislab,ncem_benchmarks,theislab/ncem_benchmarks,8,4,4,2,FALSE,https://github.com/theislab/ncem_benchmarks,8,NA,NA,NA theislab,ncem_tutorials,theislab/ncem_tutorials,10,4,5,0,FALSE,https://github.com/theislab/ncem_tutorials,10,NA,NA,NA -theislab,neural_organoid_atlas,theislab/neural_organoid_atlas,5,3,0,1,FALSE,https://github.com/theislab/neural_organoid_atlas,5,NA,NA,NA +theislab,neural_organoid_atlas,theislab/neural_organoid_atlas,6,3,0,1,FALSE,https://github.com/theislab/neural_organoid_atlas,6,NA,NA,NA theislab,organoid_dexamethason_stimulation,theislab/organoid_dexamethason_stimulation,0,3,0,1,FALSE,https://github.com/theislab/organoid_dexamethason_stimulation,0,NA,NA,NA theislab,paga,theislab/paga,176,10,21,30,FALSE,https://github.com/theislab/paga,176,NA,NA,NA theislab,pancreas-targeted_pharmacology,theislab/pancreas-targeted_pharmacology,0,7,0,2,FALSE,https://github.com/theislab/pancreas-targeted_pharmacology,0,NA,NA,NA theislab,pancreatic-endocrinogenesis,theislab/pancreatic-endocrinogenesis,4,3,0,5,FALSE,https://github.com/theislab/pancreatic-endocrinogenesis,4,NA,NA,NA -theislab,pertpy,theislab/pertpy,67,4,31,15,FALSE,https://github.com/theislab/pertpy,67,404835c82f9a3d943b85973c10130303d090839d,"Revert ""Deleted JaxscgenPlot"" +theislab,pertpy,theislab/pertpy,67,4,26,15,FALSE,https://github.com/theislab/pertpy,67,404835c82f9a3d943b85973c10130303d090839d,"Revert ""Deleted JaxscgenPlot"" This reverts commit 161fc137c5a23320a5799a22cd4d7212b550bca9.",[![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/4629618853) -theislab,pertpy,theislab/pertpy,67,4,31,15,FALSE,https://github.com/theislab/pertpy,67,83c035045afb14697009881d415df9f250ba03dd,Replaced gallery images (#488),[![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7431067256) -theislab,pertpy,theislab/pertpy,67,4,31,15,FALSE,https://github.com/theislab/pertpy,67,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) +theislab,pertpy,theislab/pertpy,67,4,26,15,FALSE,https://github.com/theislab/pertpy,67,5cc6984102f3075a2c2d4d187e1e2d434bab0e52,"Add de_res_to_anndata + +Signed-off-by: zethson ",[![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873448) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873447) [![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873443) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7432873442) +theislab,pertpy,theislab/pertpy,67,4,26,15,FALSE,https://github.com/theislab/pertpy,67,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) theislab,pertpy-datasets,theislab/pertpy-datasets,1,3,0,1,FALSE,https://github.com/theislab/pertpy-datasets,1,NA,NA,NA theislab,pertpy-tutorials,theislab/pertpy-tutorials,4,4,1,6,FALSE,https://github.com/theislab/pertpy-tutorials,4,NA,NA,NA theislab,perturbation-metrics,theislab/perturbation-metrics,4,2,1,0,FALSE,https://github.com/theislab/perturbation-metrics,4,NA,NA,NA @@ -216,7 +218,7 @@ theislab,sc-best-practices-ce,theislab/sc-best-practices-ce,8,8,2,3,FALSE,https: theislab,sc-pert,theislab/sc-pert,117,6,6,10,FALSE,https://github.com/theislab/sc-pert,117,NA,NA,NA theislab,scAnalysisTutorial,theislab/scAnalysisTutorial,10,3,0,3,FALSE,https://github.com/theislab/scAnalysisTutorial,10,NA,NA,NA theislab,scArches-reproducibility,theislab/scArches-reproducibility,30,5,5,1,FALSE,https://github.com/theislab/scArches-reproducibility,30,NA,NA,NA -theislab,scCODA,theislab/scCODA,123,9,11,21,FALSE,https://github.com/theislab/scCODA,123,NA,NA,NA +theislab,scCODA,theislab/scCODA,123,9,12,21,FALSE,https://github.com/theislab/scCODA,123,NA,NA,NA theislab,scCODA_reproducibility,theislab/scCODA_reproducibility,7,5,0,1,FALSE,https://github.com/theislab/scCODA_reproducibility,7,NA,NA,NA theislab,scPoli_legacy,theislab/scPoli_legacy,1,5,0,0,FALSE,https://github.com/theislab/scPoli_legacy,1,NA,NA,NA theislab,scPoli_reproduce,theislab/scPoli_reproduce,11,3,1,4,FALSE,https://github.com/theislab/scPoli_reproduce,11,NA,NA,NA @@ -242,7 +244,7 @@ theislab,scvelo,theislab/scvelo,371,13,53,100,FALSE,https://github.com/theislab/ Update version number.",[![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514631) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514630) [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076589652) theislab,scvelo_notebooks,theislab/scvelo_notebooks,24,2,2,12,FALSE,https://github.com/theislab/scvelo_notebooks,24,NA,NA,NA -theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7427993114) +theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7434736190) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,5fcf932c44613e6bf4063ef3075ad6062bf5d9a1,round restored counts in some affected datasets,[![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,ceb14c946f699c38d18a32192b76d4639caf845e,fix download links,[![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) theislab,sfaira-portal,theislab/sfaira-portal,0,4,2,0,FALSE,https://github.com/theislab/sfaira-portal,0,NA,NA,NA @@ -367,8 +369,8 @@ Signed-off-by: zethson Co-authored-by: xlancelottx Co-authored-by: zethson Co-authored-by: Anna Schaar ",[![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) -theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,24,2,0,2,FALSE,https://github.com/theislab/single-cell-transformer-papers,24,NA,NA,NA -theislab,single-cell-tutorial,theislab/single-cell-tutorial,1228,30,19,432,FALSE,https://github.com/theislab/single-cell-tutorial,1228,NA,NA,NA +theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,25,2,0,2,FALSE,https://github.com/theislab/single-cell-transformer-papers,25,NA,NA,NA +theislab,single-cell-tutorial,theislab/single-cell-tutorial,1229,30,19,432,FALSE,https://github.com/theislab/single-cell-tutorial,1229,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,3,4,4,3,FALSE,https://github.com/theislab/singlecell_proteomics,3,NA,NA,NA theislab,spapros,theislab/spapros,20,3,15,5,FALSE,https://github.com/theislab/spapros,20,642fb34d2ccbb1bb8730b239840bf1bfe06701f8,"[DEPENDABOT]: Bump importlib-resources from 5.12.0 to 6.1.1 in /docs @@ -387,7 +389,7 @@ updated-dependencies: Signed-off-by: dependabot[bot] ",[![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088652) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088648) theislab,spapros,theislab/spapros,20,3,15,5,FALSE,https://github.com/theislab/spapros,20,c4c0903758ecb1acd0e16c1d227e59e8be1e28de,"Merge pull request #288 from theislab/development -Mention python package in docs",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7428525456) +Mention python package in docs",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7435203951) theislab,spapros-pipeline,theislab/spapros-pipeline,7,2,0,0,FALSE,https://github.com/theislab/spapros-pipeline,7,NA,NA,NA theislab,spapros-smk,theislab/spapros-smk,0,2,0,1,FALSE,https://github.com/theislab/spapros-smk,0,NA,NA,NA theislab,spapros_reproducibility,theislab/spapros_reproducibility,0,1,1,0,FALSE,https://github.com/theislab/spapros_reproducibility,0,NA,NA,NA
8 166 13 55bcbb
theislab/pertpy 67 43126 15 <a href=“https://github.com/theislab/pertpy/commit/404835c82f9a3d943b85973c10130303d090839d” @@ -262,16 +262,19 @@

GitHub Dashboard

theislab/pertpy 67 43126 1583c035 + + +5cc698
theislab/pertpy 67 43126 15 d00c5f 15 5 - c4c090
2 0 0625890c3c4ed
theislab/transcription_factor_activity
theislab/single-cell-tutorial12281229 30 19 432 theislab/scCODA 123 91112 21
10
theislab/single-cell-transformer-papers25202
theislab/Covid_meta_analysis 24 8 2 11
theislab/scvelo_notebooks 24 2 2 12
theislab/single-cell-transformer-papers24202
theislab/interactive_plotting 20 3
theislab/cross_system_integration92100
theislab/enrichment_analysis_celltype 9 5 0 4
theislab/moslin 9 1 0 1
theislab/superexacttestpy 9 2 3 0
theislab/trvaep 9 3 0 4
theislab/cross_system_integration82100
theislab/expiMap_reproducibility 8 1
theislab/neural_organoid_atlas6301
theislab/scatac_poisson_reproducibility 6 3 0 0
theislab/sfaira_tutorials 6 4 3 2
theislab/trVAE_reproducibility 6 3 2 4
theislab/2018_Angelidis 5 5 0 6
theislab/disent 5 3 0 0
theislab/ehrapy-tutorials 5 3 1 2
theislab/InterpretableAutoencoders 5 5 0 1
theislab/kbranches 5 7 0 0
theislab/neural_organoid_atlas5301
theislab/scanpy-demo-czbiohub 5