diff --git a/README.md b/README.md index d554a3b..40e71c3 100644 --- a/README.md +++ b/README.md @@ -2,29 +2,29 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-04-30 12:10:05 UTC +2024-05-01 12:10:16 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 639 | 18 | 56 | 139 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064601) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064600) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064597) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064598) | b7335c | -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 639 | 18 | 56 | 139 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 640 | 18 | 56 | 139 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064601) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064600) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064597) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064598) | b7335c | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 640 | 18 | 56 | 139 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | | [theislab/scvelo](https://github.com/theislab/scvelo) | 392 | 12 | 57 | 101 | [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | | [theislab/scvelo](https://github.com/theislab/scvelo) | 392 | 12 | 57 | 101 | [![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8665253017) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8665253018) | f21651 | -| [theislab/cellrank](https://github.com/theislab/cellrank) | 304 | 8 | 15 | 38 | [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8601715542) | 08f1c9 | -| [theislab/cellrank](https://github.com/theislab/cellrank) | 304 | 8 | 15 | 38 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871435139) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871494371) | 607491 | +| [theislab/cellrank](https://github.com/theislab/cellrank) | 305 | 8 | 15 | 38 | [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8601715542) | 08f1c9 | +| [theislab/cellrank](https://github.com/theislab/cellrank) | 305 | 8 | 15 | 38 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871435139) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871494371) | 607491 | | [theislab/scib](https://github.com/theislab/scib) | 274 | 14 | 36 | 58 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/8788684911) | 9c5a93 | -| [theislab/scgen](https://github.com/theislab/scgen) | 247 | 9 | 19 | 51 | [![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) | d79e1f | -| [theislab/sfaira](https://github.com/theislab/sfaira) | 133 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8887119505) | 55bcbb | +| [theislab/scgen](https://github.com/theislab/scgen) | 247 | 9 | 19 | 52 | [![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) | d79e1f | +| [theislab/sfaira](https://github.com/theislab/sfaira) | 133 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8903244432) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 133 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 133 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | | [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 132 | 5 | 23 | 26 | [![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/8798884374) | 21fd89 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 118 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) | 27d854 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 118 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8883013738) | 68300b | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 118 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 118 | 5 | 38 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) | 27d854 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 118 | 5 | 38 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8899973377) | 37ac99 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 118 | 5 | 38 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | | [theislab/anndata2ri](https://github.com/theislab/anndata2ri) | 114 | 7 | 15 | 16 | [![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8891080742) | befee8 | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 26 | 13 | [![](https://github.com/theislab/ncem/workflows/Labeler/badge.svg)](https://github.com/theislab/ncem/actions/runs/5392074704) | 216fd5 | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 26 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | -| [theislab/moscot](https://github.com/theislab/moscot) | 94 | 3 | 41 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) | 6ea9a1 | +| [theislab/moscot](https://github.com/theislab/moscot) | 94 | 3 | 40 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) | 6ea9a1 | | [theislab/pertpy](https://github.com/theislab/pertpy) | 81 | 4 | 24 | 16 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8869866754) | 390a4f | | [theislab/pertpy](https://github.com/theislab/pertpy) | 81 | 4 | 24 | 16 | [![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) | 54b7f3 | | [theislab/pertpy](https://github.com/theislab/pertpy) | 81 | 4 | 24 | 16 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8679592172) | be4cce | @@ -33,16 +33,17 @@ GitHub Dashboard | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4898948664) | b893fd | | [theislab/hadge](https://github.com/theislab/hadge) | 21 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | | [theislab/hadge](https://github.com/theislab/hadge) | 21 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/pre-commit/badge.svg)](https://github.com/theislab/hadge/actions/runs/8468875722) [![](https://github.com/theislab/hadge/workflows/hadge%20test%20workflow/badge.svg)](https://github.com/theislab/hadge/actions/runs/8468875726) | 6441e6 | -| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 7 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8887854657) | e8a37c | +| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 7 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8904014269) | e8a37c | | [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 7 | 5 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/8884867584) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/8884867592) | f256c7 | -| [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 3 | 4 | [![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) | 5bf0cd | -| [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 3 | 4 | [![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/8824862973) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/8824862969) | 74b579 | +| [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 0 | 4 | [![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) | 5bf0cd | +| [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 0 | 4 | [![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/8900509976) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/8905593851) | 991a31 | | [theislab/graphcompass](https://github.com/theislab/graphcompass) | 15 | 2 | 0 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | | [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 3 | 6 | [![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8891079745) | 849e5c | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 5 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) | e441a5 | | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 4 | 1 | 0 | 0 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825726) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825728) | f5c767 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8894371415) | 3eebc9 | +| [theislab/ehrdata](https://github.com/theislab/ehrdata) | 4 | 3 | 1 | 1 | [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8905618087) | 679be0 | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8909046008) | 069b4f | | [theislab/transcription_factor_activity](https://github.com/theislab/transcription_factor_activity) | 1 | 1 | 5 | 1 | [![](https://github.com/theislab/transcription_factor_activity/workflows/Check%20Build/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287206) [![](https://github.com/theislab/transcription_factor_activity/workflows/Test/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287208) | ced39f | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Labeler/badge.svg)](https://github.com/theislab/idtrack/actions/runs/5369045662) | 12aa73 | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/idtrack/actions/runs/4836150850) | 63e94a | @@ -61,9 +62,9 @@ GitHub Dashboard | [theislab/scCODA](https://github.com/theislab/scCODA) | 134 | 9 | 8 | 23 | | [theislab/sc-pert](https://github.com/theislab/sc-pert) | 128 | 6 | 6 | 10 | | [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 97 | 6 | 0 | 10 | -| [theislab/chemCPA](https://github.com/theislab/chemCPA) | 87 | 5 | 9 | 22 | +| [theislab/chemCPA](https://github.com/theislab/chemCPA) | 88 | 5 | 9 | 22 | | [theislab/cpa](https://github.com/theislab/cpa) | 74 | 4 | 14 | 15 | -| [theislab/scib-pipeline](https://github.com/theislab/scib-pipeline) | 58 | 7 | 16 | 26 | +| [theislab/scib-pipeline](https://github.com/theislab/scib-pipeline) | 59 | 7 | 16 | 27 | | [theislab/AutoGeneS](https://github.com/theislab/AutoGeneS) | 53 | 6 | 5 | 8 | | [theislab/trVAE](https://github.com/theislab/trVAE) | 53 | 7 | 2 | 11 | | [theislab/scib-reproducibility](https://github.com/theislab/scib-reproducibility) | 51 | 6 | 3 | 15 | @@ -78,8 +79,8 @@ GitHub Dashboard | [theislab/scvelo_notebooks](https://github.com/theislab/scvelo_notebooks) | 26 | 2 | 2 | 13 | | [theislab/Covid_meta_analysis](https://github.com/theislab/Covid_meta_analysis) | 24 | 8 | 2 | 11 | | [theislab/interactive_plotting](https://github.com/theislab/interactive_plotting) | 21 | 4 | 11 | 7 | +| [theislab/nicheformer](https://github.com/theislab/nicheformer) | 21 | 2 | 2 | 2 | | [theislab/mubind](https://github.com/theislab/mubind) | 20 | 3 | 30 | 0 | -| [theislab/nicheformer](https://github.com/theislab/nicheformer) | 20 | 2 | 2 | 2 | | [theislab/scgen-reproducibility](https://github.com/theislab/scgen-reproducibility) | 17 | 4 | 5 | 8 | | [theislab/cellrank_reproducibility](https://github.com/theislab/cellrank_reproducibility) | 14 | 2 | 0 | 8 | | [theislab/campa](https://github.com/theislab/campa) | 13 | 4 | 5 | 4 | @@ -133,7 +134,6 @@ GitHub Dashboard | [theislab/2022_Tritschler_pancreas_cross_species](https://github.com/theislab/2022_Tritschler_pancreas_cross_species) | 4 | 3 | 0 | 1 | | [theislab/cellrank_reproducibility_preprint](https://github.com/theislab/cellrank_reproducibility_preprint) | 4 | 2 | 0 | 0 | | [theislab/covid-perturbation](https://github.com/theislab/covid-perturbation) | 4 | 3 | 0 | 0 | -| 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Repos without Github Actions

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Repos without Github Actions

- + - + @@ -669,19 +678,19 @@

Repos without Github Actions

+ + + + + + + - - - - - - - @@ -1054,601 +1063,594 @@

Repos without Github Actions

- - - - - - - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + diff --git a/repos.csv b/repos.csv index b999afa..5edb779 100644 --- a/repos.csv +++ b/repos.csv @@ -58,14 +58,14 @@ theislab,batchglm,theislab/batchglm,26,3,46,9,FALSE,https://github.com/theislab/ theislab,bindome,theislab/bindome,1,3,5,1,FALSE,https://github.com/theislab/bindome,1,NA,NA,NA theislab,campa,theislab/campa,13,4,5,4,FALSE,https://github.com/theislab/campa,13,NA,NA,NA theislab,campa_ana,theislab/campa_ana,2,4,0,0,FALSE,https://github.com/theislab/campa_ana,2,NA,NA,NA -theislab,cellrank,theislab/cellrank,304,8,15,38,FALSE,https://github.com/theislab/cellrank,304,08f1c901cc4ba1f6500f6fced4df8f5c076755e9,"Fix/importError #1183 (#1184) +theislab,cellrank,theislab/cellrank,305,8,15,38,FALSE,https://github.com/theislab/cellrank,305,08f1c901cc4ba1f6500f6fced4df8f5c076755e9,"Fix/importError #1183 (#1184) * fixed importError, issue #1183 * Removed 'renamed_arg' * linting",[![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8601715542) -theislab,cellrank,theislab/cellrank,304,8,15,38,FALSE,https://github.com/theislab/cellrank,304,6074913214f087301dd49bd9ef581c20ec56e759,Fix failing test,[![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871435139) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871494371) +theislab,cellrank,theislab/cellrank,305,8,15,38,FALSE,https://github.com/theislab/cellrank,305,6074913214f087301dd49bd9ef581c20ec56e759,Fix failing test,[![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871435139) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8871494371) theislab,cellrank2_reproducibility,theislab/cellrank2_reproducibility,4,1,0,0,FALSE,https://github.com/theislab/cellrank2_reproducibility,4,f5c767a08bd0db4b58036afaffc91d0a649c90a5,"Add initial state identification (#59) * Add `embryoid_body/initial_state.ipynb` @@ -80,7 +80,7 @@ theislab,cellrank2_reproducibility,theislab/cellrank2_reproducibility,4,1,0,0,FA theislab,cellrank_notebooks,theislab/cellrank_notebooks,6,4,1,5,FALSE,https://github.com/theislab/cellrank_notebooks,6,6777840bcc146924d208c0b9b02677da63620805,[ci skip] Fix pepy badge,[![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) theislab,cellrank_reproducibility,theislab/cellrank_reproducibility,14,2,0,8,FALSE,https://github.com/theislab/cellrank_reproducibility,14,NA,NA,NA theislab,cellrank_reproducibility_preprint,theislab/cellrank_reproducibility_preprint,4,2,0,0,FALSE,https://github.com/theislab/cellrank_reproducibility_preprint,4,NA,NA,NA -theislab,chemCPA,theislab/chemCPA,87,5,9,22,FALSE,https://github.com/theislab/chemCPA,87,NA,NA,NA +theislab,chemCPA,theislab/chemCPA,88,5,9,22,FALSE,https://github.com/theislab/chemCPA,88,NA,NA,NA theislab,collideseq_reproducibility,theislab/collideseq_reproducibility,0,2,0,0,FALSE,https://github.com/theislab/collideseq_reproducibility,0,NA,NA,NA theislab,consensus-clustering-evaluation,theislab/consensus-clustering-evaluation,0,4,0,0,FALSE,https://github.com/theislab/consensus-clustering-evaluation,0,NA,NA,NA theislab,countae,theislab/countae,1,4,0,0,FALSE,https://github.com/theislab/countae,1,NA,NA,NA @@ -97,23 +97,72 @@ theislab,diffxpy,theislab/diffxpy,174,6,107,23,FALSE,https://github.com/theislab theislab,diffxpy_tutorials,theislab/diffxpy_tutorials,10,8,4,2,FALSE,https://github.com/theislab/diffxpy_tutorials,10,NA,NA,NA theislab,disent,theislab/disent,6,3,0,0,FALSE,https://github.com/theislab/disent,6,NA,NA,NA theislab,edgepy,theislab/edgepy,0,3,0,0,FALSE,https://github.com/theislab/edgepy,0,NA,NA,NA -theislab,ehrapy,theislab/ehrapy,118,5,41,14,FALSE,https://github.com/theislab/ehrapy,118,27d854b4ec26b032ddf611cd7b6cf21dd38de253,"Version 0.7.0 +theislab,ehrapy,theislab/ehrapy,118,5,38,14,FALSE,https://github.com/theislab/ehrapy,118,27d854b4ec26b032ddf611cd7b6cf21dd38de253,"Version 0.7.0 Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) -theislab,ehrapy,theislab/ehrapy,118,5,41,14,FALSE,https://github.com/theislab/ehrapy,118,68300b1755ec29962848d24e5ba57399cb680675,"Fix feature importance warnings (#708) +theislab,ehrapy,theislab/ehrapy,118,5,38,14,FALSE,https://github.com/theislab/ehrapy,118,37ac997e07cf4e6a8da877bca21975c34b413ca1,"add batch-wise normalization argument (#711) -* Fix feature importance warnings +* add batch-wise normalization argument -Signed-off-by: zethson +* Update ehrapy/preprocessing/_normalization.py -* Fix feature importance warnings +Co-authored-by: Lukas Heumos -Signed-off-by: zethson +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* [pre-commit.ci] auto fixes from pre-commit.com hooks + +for more information, see https://pre-commit.ci + +* [pre-commit.ci] auto fixes from pre-commit.com hooks + +for more information, see https://pre-commit.ci + +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* [pre-commit.ci] auto fixes from pre-commit.com hooks + +for more information, see https://pre-commit.ci + +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* Update ehrapy/preprocessing/_normalization.py + +Co-authored-by: Lukas Heumos + +* [pre-commit.ci] auto fixes from pre-commit.com hooks + +for more information, see https://pre-commit.ci + +* batch -> group --------- -Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8883013738) -theislab,ehrapy,theislab/ehrapy,118,5,41,14,FALSE,https://github.com/theislab/ehrapy,118,84d33c8988ea560aa557fbe6a99b926befa84457,"Add test windows +Co-authored-by: Lukas Heumos +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8899973377) +theislab,ehrapy,theislab/ehrapy,118,5,38,14,FALSE,https://github.com/theislab/ehrapy,118,84d33c8988ea560aa557fbe6a99b926befa84457,"Add test windows Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) theislab,ehrapy-cli,theislab/ehrapy-cli,1,3,0,0,FALSE,https://github.com/theislab/ehrapy-cli,1,NA,NA,NA @@ -123,7 +172,7 @@ change diabetes dataset doc",[![](https://github.com/theislab/ehrapy-datasets/wo theislab,ehrapy-reproducibility,theislab/ehrapy-reproducibility,0,2,0,0,FALSE,https://github.com/theislab/ehrapy-reproducibility,0,NA,NA,NA theislab,ehrapy-site,theislab/ehrapy-site,1,2,0,0,FALSE,https://github.com/theislab/ehrapy-site,1,NA,NA,NA theislab,ehrapy-tutorials,theislab/ehrapy-tutorials,5,3,2,2,FALSE,https://github.com/theislab/ehrapy-tutorials,5,NA,NA,NA -theislab,ehrdata,theislab/ehrdata,4,3,1,1,FALSE,https://github.com/theislab/ehrdata,4,NA,NA,NA +theislab,ehrdata,theislab/ehrdata,4,3,1,1,FALSE,https://github.com/theislab/ehrdata,4,679be094dadd11670d5a3d113da563f6e2b787b9,minor updates,[![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8905618087) theislab,enrichment_analysis_celltype,theislab/enrichment_analysis_celltype,9,5,0,4,FALSE,https://github.com/theislab/enrichment_analysis_celltype,9,NA,NA,NA theislab,epicardiods_analysis,theislab/epicardiods_analysis,2,2,1,0,FALSE,https://github.com/theislab/epicardiods_analysis,2,NA,NA,NA theislab,expiMap_reproducibility,theislab/expiMap_reproducibility,9,5,3,4,FALSE,https://github.com/theislab/expiMap_reproducibility,9,NA,NA,NA @@ -132,13 +181,13 @@ theislab,feature-attribution-sc,theislab/feature-attribution-sc,4,2,8,1,FALSE,ht theislab,flexible_priors,theislab/flexible_priors,2,2,0,0,FALSE,https://github.com/theislab/flexible_priors,2,NA,NA,NA theislab,flowVI,theislab/flowVI,5,3,0,0,FALSE,https://github.com/theislab/flowVI,5,NA,NA,NA theislab,gastrulation_analysis,theislab/gastrulation_analysis,9,4,0,1,FALSE,https://github.com/theislab/gastrulation_analysis,9,NA,NA,NA -theislab,geome,theislab/geome,15,3,3,4,FALSE,https://github.com/theislab/geome,15,5bf0cd07b2ea7fa224a37f69232542a9e686c5bf,"Merge pull request #31 from theislab/template-update +theislab,geome,theislab/geome,15,3,0,4,FALSE,https://github.com/theislab/geome,15,5bf0cd07b2ea7fa224a37f69232542a9e686c5bf,"Merge pull request #31 from theislab/template-update Automated template update from cookiecutter-scverse",[![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) -theislab,geome,theislab/geome,15,3,3,4,FALSE,https://github.com/theislab/geome,15,74b57954094bb6346e0d7240c8cc0cf1aaab0938,"Merge pull request #46 from theislab/update +theislab,geome,theislab/geome,15,3,0,4,FALSE,https://github.com/theislab/geome,15,991a31359e3d975a2cc02ec532c09d0f1a6e5811,"Merge pull request #47 from theislab/refactor -refactoring, updated the notebooks and tested them",[![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/8824862973) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/8824862969) -theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,3eebc9d74cd95f2263e2829654bdd192f3765f1a,[status] 2024-04-29 12:12:16 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8894371415) +Adding tests and interface improvements",[![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/8900509976) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/8905593851) +theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,069b4fc3abfbc33569b56155e2d67fe2b170758a,[status] 2024-04-30 12:11:29 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8909046008) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,graphcompass,theislab/graphcompass,15,2,0,0,FALSE,https://github.com/theislab/graphcompass,15,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) theislab,greatpy,theislab/greatpy,8,3,4,0,FALSE,https://github.com/theislab/greatpy,8,NA,NA,NA @@ -167,7 +216,7 @@ theislab,jump-cpg0016-segmentation,theislab/jump-cpg0016-segmentation,5,1,0,0,FA theislab,kBET,theislab/kBET,145,8,8,23,FALSE,https://github.com/theislab/kBET,145,NA,NA,NA theislab,kbranches,theislab/kbranches,5,7,0,0,FALSE,https://github.com/theislab/kbranches,5,NA,NA,NA theislab,masterpraktikum_ssl_segmentation,theislab/masterpraktikum_ssl_segmentation,0,3,1,1,FALSE,https://github.com/theislab/masterpraktikum_ssl_segmentation,0,NA,NA,NA -theislab,moscot,theislab/moscot,94,3,41,6,FALSE,https://github.com/theislab/moscot,94,6ea9a1612b829aaa4a1c192210e340a9c08d4ac6,"fix bug in quad problem marginals (#666) +theislab,moscot,theislab/moscot,94,3,40,6,FALSE,https://github.com/theislab/moscot,94,6ea9a1612b829aaa4a1c192210e340a9c08d4ac6,"fix bug in quad problem marginals (#666) Co-authored-by: Dominik Klein ",[![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) theislab,moscot-framework_reproducibility,theislab/moscot-framework_reproducibility,1,2,1,0,FALSE,https://github.com/theislab/moscot-framework_reproducibility,1,NA,NA,NA @@ -190,7 +239,7 @@ theislab,ncem,theislab/ncem,96,6,26,13,FALSE,https://github.com/theislab/ncem,96 theislab,ncem_benchmarks,theislab/ncem_benchmarks,8,4,4,2,FALSE,https://github.com/theislab/ncem_benchmarks,8,NA,NA,NA theislab,ncem_tutorials,theislab/ncem_tutorials,10,4,5,0,FALSE,https://github.com/theislab/ncem_tutorials,10,NA,NA,NA theislab,neural_organoid_atlas,theislab/neural_organoid_atlas,9,4,2,1,FALSE,https://github.com/theislab/neural_organoid_atlas,9,NA,NA,NA -theislab,nicheformer,theislab/nicheformer,20,2,2,2,FALSE,https://github.com/theislab/nicheformer,20,NA,NA,NA +theislab,nicheformer,theislab/nicheformer,21,2,2,2,FALSE,https://github.com/theislab/nicheformer,21,NA,NA,NA theislab,organoid_dexamethason_stimulation,theislab/organoid_dexamethason_stimulation,0,3,0,1,FALSE,https://github.com/theislab/organoid_dexamethason_stimulation,0,NA,NA,NA theislab,paga,theislab/paga,186,10,21,32,FALSE,https://github.com/theislab/paga,186,NA,NA,NA theislab,pancreas-targeted_pharmacology,theislab/pancreas-targeted_pharmacology,0,7,0,2,FALSE,https://github.com/theislab/pancreas-targeted_pharmacology,0,NA,NA,NA @@ -249,7 +298,7 @@ Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.gi theislab,scarches,theislab/scarches,310,14,39,49,FALSE,https://github.com/theislab/scarches,310,NA,NA,NA theislab,scarches_notebooks,theislab/scarches_notebooks,0,3,0,0,FALSE,https://github.com/theislab/scarches_notebooks,0,NA,NA,NA theislab,scatac_poisson_reproducibility,theislab/scatac_poisson_reproducibility,6,3,0,0,FALSE,https://github.com/theislab/scatac_poisson_reproducibility,6,NA,NA,NA -theislab,scgen,theislab/scgen,247,9,19,51,FALSE,https://github.com/theislab/scgen,247,d79e1f04233c30f9a4eb5b8d57718127909807d7,Merge pull request #87 from theislab/batch_corr_labels,[![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) +theislab,scgen,theislab/scgen,247,9,19,52,FALSE,https://github.com/theislab/scgen,247,d79e1f04233c30f9a4eb5b8d57718127909807d7,Merge pull request #87 from theislab/batch_corr_labels,[![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) theislab,scgen-reproducibility,theislab/scgen-reproducibility,17,4,5,8,FALSE,https://github.com/theislab/scgen-reproducibility,17,NA,NA,NA theislab,scib,theislab/scib,274,14,36,58,FALSE,https://github.com/theislab/scib,NA,9c5a936b0ecf21ba09b1bc803712a42c2a942fbc,"Use precomputed clustering (#406) @@ -276,7 +325,7 @@ theislab,scib,theislab/scib,274,14,36,58,FALSE,https://github.com/theislab/scib, * add use_rep to optimal clustering * use graph connectivity for scanorama",[![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/8788684911) -theislab,scib-pipeline,theislab/scib-pipeline,58,7,16,26,FALSE,https://github.com/theislab/scib-pipeline,58,NA,NA,NA +theislab,scib-pipeline,theislab/scib-pipeline,59,7,16,27,FALSE,https://github.com/theislab/scib-pipeline,59,NA,NA,NA theislab,scib-reproducibility,theislab/scib-reproducibility,51,6,3,15,FALSE,https://github.com/theislab/scib-reproducibility,51,NA,NA,NA theislab,scvelo,theislab/scvelo,392,12,57,101,FALSE,https://github.com/theislab/scvelo,392,b2f31b345641efdccd39fbcb8c0beaa0014b4b88,"Update `pyproject.toml` (#1226) @@ -293,7 +342,7 @@ theislab,scvelo,theislab/scvelo,392,12,57,101,FALSE,https://github.com/theislab/ Co-authored-by: Philipp Weiler ",[![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8665253017) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8665253018) theislab,scvelo_notebooks,theislab/scvelo_notebooks,26,2,2,13,FALSE,https://github.com/theislab/scvelo_notebooks,26,NA,NA,NA -theislab,sfaira,theislab/sfaira,133,8,166,13,FALSE,https://github.com/theislab/sfaira,133,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8887119505) +theislab,sfaira,theislab/sfaira,133,8,166,13,FALSE,https://github.com/theislab/sfaira,133,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8903244432) theislab,sfaira,theislab/sfaira,133,8,166,13,FALSE,https://github.com/theislab/sfaira,133,5fcf932c44613e6bf4063ef3075ad6062bf5d9a1,round restored counts in some affected datasets,[![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) theislab,sfaira,theislab/sfaira,133,8,166,13,FALSE,https://github.com/theislab/sfaira,133,ceb14c946f699c38d18a32192b76d4639caf845e,fix download links,[![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) theislab,sfaira-portal,theislab/sfaira-portal,0,4,2,0,FALSE,https://github.com/theislab/sfaira-portal,0,NA,NA,NA @@ -301,7 +350,7 @@ theislab,sfaira-site,theislab/sfaira-site,0,4,0,0,FALSE,https://github.com/theis theislab,sfaira_benchmarks,theislab/sfaira_benchmarks,0,3,0,0,FALSE,https://github.com/theislab/sfaira_benchmarks,0,NA,NA,NA theislab,sfaira_extension,theislab/sfaira_extension,0,3,1,0,FALSE,https://github.com/theislab/sfaira_extension,0,NA,NA,NA theislab,sfaira_tutorials,theislab/sfaira_tutorials,6,4,3,2,FALSE,https://github.com/theislab/sfaira_tutorials,6,NA,NA,NA -theislab,single-cell-best-practices,theislab/single-cell-best-practices,639,18,56,139,FALSE,https://github.com/theislab/single-cell-best-practices,639,b7335cda573f62813f404f77ad4bb4bbe85f439d,"Latest pertpy for conditions nb (#266) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,640,18,56,139,FALSE,https://github.com/theislab/single-cell-best-practices,640,b7335cda573f62813f404f77ad4bb4bbe85f439d,"Latest pertpy for conditions nb (#266) * Switch to lastest jupyterbook version @@ -314,7 +363,7 @@ Signed-off-by: zethson --------- Signed-off-by: zethson ",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064601) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064600) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064597) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064598) -theislab,single-cell-best-practices,theislab/single-cell-best-practices,639,18,56,139,FALSE,https://github.com/theislab/single-cell-best-practices,639,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,640,18,56,139,FALSE,https://github.com/theislab/single-cell-best-practices,640,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) * scATAC_pp @@ -433,7 +482,7 @@ theislab,single-cell-tutorial,theislab/single-cell-tutorial,1299,30,21,436,FALSE theislab,singlecell_proteomics,theislab/singlecell_proteomics,3,5,6,3,FALSE,https://github.com/theislab/singlecell_proteomics,3,NA,NA,NA theislab,spapros,theislab/spapros,21,3,7,5,FALSE,https://github.com/theislab/spapros,21,e8a37c9e78039920a0792fc04f426ab062dbbf88,"Merge pull request #321 from theislab/patch_precommit -pre commit correction of readthedocs.yml",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8887854657) +pre commit correction of readthedocs.yml",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8904014269) theislab,spapros,theislab/spapros,21,3,7,5,FALSE,https://github.com/theislab/spapros,21,f256c72f53320f6f91b93a6537e482f1407ee86e,"[DEPENDABOT]: Bump nbconvert from 6.5.4 to 7.16.4 in /docs Bumps [nbconvert](https://github.com/jupyter/nbconvert) from 6.5.4 to 7.16.4.
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