diff --git a/README.md b/README.md index 6887b5d..6b2827b 100644 --- a/README.md +++ b/README.md @@ -2,46 +2,47 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-04-09 12:10:15 UTC +2024-04-10 12:10:11 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 620 | 16 | 49 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064601) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064600) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064597) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064598) | b7335c | -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 620 | 16 | 49 | 134 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | -| [theislab/scvelo](https://github.com/theislab/scvelo) | 386 | 13 | 57 | 102 | [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 620 | 16 | 49 | 136 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064601) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064600) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064597) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064598) | b7335c | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 620 | 16 | 49 | 136 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | +| [theislab/scvelo](https://github.com/theislab/scvelo) | 387 | 13 | 58 | 102 | [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | | [theislab/cellrank](https://github.com/theislab/cellrank) | 297 | 8 | 17 | 37 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8592624050) [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8601715542) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/8592683148) | 08f1c9 | | [theislab/scib](https://github.com/theislab/scib) | 267 | 15 | 37 | 58 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/8510251633) | 59ae6e | | [theislab/scgen](https://github.com/theislab/scgen) | 244 | 9 | 19 | 50 | [![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) | d79e1f | -| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8608240668) | 55bcbb | +| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8623905477) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | | [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 130 | 5 | 21 | 24 | [![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/8433074462) | 045471 | | [theislab/anndata2ri](https://github.com/theislab/anndata2ri) | 113 | 7 | 15 | 16 | [![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/8612419189) | 8420cb | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 42 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) | 27d854 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 42 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8590057484) | 47e5c0 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 42 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) | 27d854 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 109 | 5 | 41 | 14 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8627655049) | 9ccc36 | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 26 | 13 | [![](https://github.com/theislab/ncem/workflows/Labeler/badge.svg)](https://github.com/theislab/ncem/actions/runs/5392074704) | 216fd5 | | [theislab/ncem](https://github.com/theislab/ncem) | 96 | 6 | 26 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | -| [theislab/moscot](https://github.com/theislab/moscot) | 91 | 3 | 38 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) | 6ea9a1 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 26 | 16 | [![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) | 54b7f3 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 26 | 16 | [![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357836) [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357859) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357832) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357830) | b2fd09 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 26 | 16 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | +| [theislab/moscot](https://github.com/theislab/moscot) | 91 | 3 | 40 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) | 6ea9a1 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 27 | 16 | [![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) | 54b7f3 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 27 | 16 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357859) | b2fd09 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 80 | 4 | 27 | 16 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | | [theislab/destiny](https://github.com/theislab/destiny) | 67 | 5 | 31 | 12 | [![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) | 300eb2 | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825767) [![](https://github.com/theislab/batchglm/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825761) | 11ffbb | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4898948664) | b893fd | -| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 11 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8485425604) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8608938944) | 3944b1 | -| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 11 | 5 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/8512286858) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/8512286860) | 3a6a20 | +| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 11 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8485425604) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8624583853) | 3944b1 | +| [theislab/spapros](https://github.com/theislab/spapros) | 21 | 3 | 11 | 5 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/8619161325) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/8619161330) | 8a2c25 | | [theislab/hadge](https://github.com/theislab/hadge) | 19 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | | [theislab/hadge](https://github.com/theislab/hadge) | 19 | 3 | 12 | 5 | [![](https://github.com/theislab/hadge/workflows/pre-commit/badge.svg)](https://github.com/theislab/hadge/actions/runs/8468875722) [![](https://github.com/theislab/hadge/workflows/hadge%20test%20workflow/badge.svg)](https://github.com/theislab/hadge/actions/runs/8468875726) | 6441e6 | | [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/7921988741) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/7921988747) | 294880 | | [theislab/geome](https://github.com/theislab/geome) | 15 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) | 5bf0cd | -| [theislab/graphcompass](https://github.com/theislab/graphcompass) | 12 | 1 | 0 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | +| [theislab/graphcompass](https://github.com/theislab/graphcompass) | 14 | 1 | 0 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | | [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 3 | 5 | [![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8612417105) | 56aa55 | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | | [theislab/moscot_notebooks](https://github.com/theislab/moscot_notebooks) | 6 | 1 | 3 | 2 | [![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/8592654827) | bc71ed | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 5 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) | e441a5 | | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 4 | 1 | 0 | 0 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825726) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/8315825728) | f5c767 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8615312856) | bf6fb9 | +| [theislab/ehrdata](https://github.com/theislab/ehrdata) | 4 | 3 | 0 | 1 | [![](https://github.com/theislab/ehrdata/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8629737046) [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8629737047) | a34408 | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8630851368) | 1e792b | | [theislab/transcription_factor_activity](https://github.com/theislab/transcription_factor_activity) | 1 | 1 | 5 | 1 | [![](https://github.com/theislab/transcription_factor_activity/workflows/Check%20Build/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287206) [![](https://github.com/theislab/transcription_factor_activity/workflows/Test/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287208) | ced39f | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Labeler/badge.svg)](https://github.com/theislab/idtrack/actions/runs/5369045662) | 12aa73 | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/idtrack/actions/runs/4836150850) | 63e94a | @@ -51,8 +52,8 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1286 | 30 | 21 | 437 | -| [theislab/scarches](https://github.com/theislab/scarches) | 307 | 14 | 37 | 48 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1288 | 30 | 21 | 437 | +| [theislab/scarches](https://github.com/theislab/scarches) | 307 | 14 | 38 | 48 | | [theislab/dca](https://github.com/theislab/dca) | 231 | 11 | 31 | 68 | | [theislab/paga](https://github.com/theislab/paga) | 183 | 10 | 21 | 31 | | [theislab/diffxpy](https://github.com/theislab/diffxpy) | 173 | 6 | 107 | 23 | @@ -129,7 +130,6 @@ GitHub Dashboard | [theislab/2022_Tritschler_pancreas_cross_species](https://github.com/theislab/2022_Tritschler_pancreas_cross_species) | 4 | 3 | 0 | 1 | | [theislab/cellrank_reproducibility_preprint](https://github.com/theislab/cellrank_reproducibility_preprint) | 4 | 2 | 0 | 0 | | [theislab/covid-perturbation](https://github.com/theislab/covid-perturbation) | 4 | 3 | 0 | 0 | -| [theislab/ehrdata](https://github.com/theislab/ehrdata) | 4 | 3 | 1 | 1 | | [theislab/extended-single-cell-best-practices-container](https://github.com/theislab/extended-single-cell-best-practices-container) | 4 | 4 | 2 | 1 | | [theislab/feature-attribution-sc](https://github.com/theislab/feature-attribution-sc) | 4 | 2 | 8 | 1 | | [theislab/LODE](https://github.com/theislab/LODE) | 4 | 2 | 9 | 0 | @@ -142,7 +142,7 @@ GitHub Dashboard | [theislab/nbconvertR](https://github.com/theislab/nbconvertR) | 3 | 3 | 1 | 2 | | [theislab/sc_analysis_template](https://github.com/theislab/sc_analysis_template) | 3 | 3 | 0 | 0 | | [theislab/singlecell_proteomics](https://github.com/theislab/singlecell_proteomics) | 3 | 5 | 6 | 3 | -| [theislab/ssl_in_scg](https://github.com/theislab/ssl_in_scg) | 3 | 0 | 1 | 0 | +| [theislab/ssl_in_scg](https://github.com/theislab/ssl_in_scg) | 3 | 0 | 0 | 0 | | [theislab/2020_iPS_Lung_Differentiation](https://github.com/theislab/2020_iPS_Lung_Differentiation) | 2 | 5 | 0 | 2 | | [theislab/2021_Aliluev_Tritschler_gut_HFD](https://github.com/theislab/2021_Aliluev_Tritschler_gut_HFD) | 2 | 4 | 0 | 1 | | [theislab/augurpy](https://github.com/theislab/augurpy) | 2 | 2 | 10 | 0 | diff --git a/index.html b/index.html index bfe4d6d..d473cdc 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

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Repos without Github Actions

- - - - - - - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + diff --git a/repos.csv b/repos.csv index 64ece68..50f8ff5 100644 --- a/repos.csv +++ b/repos.csv @@ -96,45 +96,18 @@ theislab,diffxpy,theislab/diffxpy,173,6,107,23,FALSE,https://github.com/theislab theislab,diffxpy_tutorials,theislab/diffxpy_tutorials,10,8,4,2,FALSE,https://github.com/theislab/diffxpy_tutorials,10,NA,NA,NA theislab,disent,theislab/disent,6,3,0,0,FALSE,https://github.com/theislab/disent,6,NA,NA,NA theislab,edgepy,theislab/edgepy,0,3,0,0,FALSE,https://github.com/theislab/edgepy,0,NA,NA,NA -theislab,ehrapy,theislab/ehrapy,109,5,42,14,FALSE,https://github.com/theislab/ehrapy,109,27d854b4ec26b032ddf611cd7b6cf21dd38de253,"Version 0.7.0 +theislab,ehrapy,theislab/ehrapy,109,5,41,14,FALSE,https://github.com/theislab/ehrapy,109,27d854b4ec26b032ddf611cd7b6cf21dd38de253,"Version 0.7.0 Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8390347476) -theislab,ehrapy,theislab/ehrapy,109,5,42,14,FALSE,https://github.com/theislab/ehrapy,109,47e5c07576bd78b051a0b18586b9eb97b507f04d,"Calculation of feature importances in a supervised setting (#677) - -* Added feature importances function and tests - -* Added feature importances plotting function - -* Add function in init - -* Added evaluation on test set - -* Raise error for non-numeric features - -* Added output as percentage option - -* Harmonize plotting function - -* PR Reviews - -* Return Figure axes when show=False - -* Refactor API - -* Added docs examples - -* Auto prediction_type inference - -* Simplified error message - -Co-authored-by: Lukas Heumos - ---------- - -Co-authored-by: Lukas Heumos ",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8590057484) -theislab,ehrapy,theislab/ehrapy,109,5,42,14,FALSE,https://github.com/theislab/ehrapy,109,84d33c8988ea560aa557fbe6a99b926befa84457,"Add test windows +theislab,ehrapy,theislab/ehrapy,109,5,41,14,FALSE,https://github.com/theislab/ehrapy,109,84d33c8988ea560aa557fbe6a99b926befa84457,"Add test windows Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) +theislab,ehrapy,theislab/ehrapy,109,5,41,14,FALSE,https://github.com/theislab/ehrapy,109,9ccc36f669ff7283175b7ebb59a70edfcbbbe74b,"[pre-commit.ci] pre-commit autoupdate (#685) + +updates: +- [github.com/pre-commit/pre-commit-hooks: v4.5.0 → v4.6.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.5.0...v4.6.0) + +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/8627655049) theislab,ehrapy-cli,theislab/ehrapy-cli,1,3,0,0,FALSE,https://github.com/theislab/ehrapy-cli,1,NA,NA,NA theislab,ehrapy-datasets,theislab/ehrapy-datasets,5,2,0,2,FALSE,https://github.com/theislab/ehrapy-datasets,5,e441a5d0912396064360799f10de973b377ba6a5,"Merge pull request #23 from theislab/diabetes-update @@ -142,7 +115,9 @@ change diabetes dataset doc",[![](https://github.com/theislab/ehrapy-datasets/wo theislab,ehrapy-reproducibility,theislab/ehrapy-reproducibility,0,2,0,0,FALSE,https://github.com/theislab/ehrapy-reproducibility,0,NA,NA,NA theislab,ehrapy-site,theislab/ehrapy-site,1,2,0,0,FALSE,https://github.com/theislab/ehrapy-site,1,NA,NA,NA theislab,ehrapy-tutorials,theislab/ehrapy-tutorials,5,3,2,2,FALSE,https://github.com/theislab/ehrapy-tutorials,5,NA,NA,NA -theislab,ehrdata,theislab/ehrdata,4,3,1,1,FALSE,https://github.com/theislab/ehrdata,4,NA,NA,NA +theislab,ehrdata,theislab/ehrdata,4,3,0,1,FALSE,https://github.com/theislab/ehrdata,4,a344089a3c168b54ca183036a3de0f532cc52e81,"Merge pull request #12 from theislab/pre-commit-ci-update-config + +[pre-commit.ci] pre-commit autoupdate",[![](https://github.com/theislab/ehrdata/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8629737046) [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/8629737047) theislab,enrichment_analysis_celltype,theislab/enrichment_analysis_celltype,9,5,0,4,FALSE,https://github.com/theislab/enrichment_analysis_celltype,9,NA,NA,NA theislab,epicardiods_analysis,theislab/epicardiods_analysis,2,2,1,0,FALSE,https://github.com/theislab/epicardiods_analysis,2,NA,NA,NA theislab,expiMap_reproducibility,theislab/expiMap_reproducibility,9,5,3,4,FALSE,https://github.com/theislab/expiMap_reproducibility,9,NA,NA,NA @@ -155,9 +130,9 @@ theislab,geome,theislab/geome,15,3,4,4,FALSE,https://github.com/theislab/geome,1 theislab,geome,theislab/geome,15,3,4,4,FALSE,https://github.com/theislab/geome,15,5bf0cd07b2ea7fa224a37f69232542a9e686c5bf,"Merge pull request #31 from theislab/template-update Automated template update from cookiecutter-scverse",[![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) -theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,bf6fb91310d71bd06221f51377570387b1c5daee,[status] 2024-04-08 12:11:17 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8615312856) +theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,1e792b2317a3c8b444acd713667ebed1b7c5a510,[status] 2024-04-09 12:12:33 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/8630851368) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA -theislab,graphcompass,theislab/graphcompass,12,1,0,0,FALSE,https://github.com/theislab/graphcompass,12,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) +theislab,graphcompass,theislab/graphcompass,14,1,0,0,FALSE,https://github.com/theislab/graphcompass,14,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) theislab,greatpy,theislab/greatpy,8,3,4,0,FALSE,https://github.com/theislab/greatpy,8,NA,NA,NA theislab,gut_lineage,theislab/gut_lineage,2,3,0,3,FALSE,https://github.com/theislab/gut_lineage,2,NA,NA,NA theislab,hadge,theislab/hadge,19,3,12,5,FALSE,https://github.com/theislab/hadge,19,1ed105ed192e66898ff7a305a2c21f5b8c81bcf7,fix gdown bug,[![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) @@ -184,7 +159,7 @@ theislab,jump-cpg0016-segmentation,theislab/jump-cpg0016-segmentation,3,0,0,0,FA theislab,kBET,theislab/kBET,140,8,8,23,FALSE,https://github.com/theislab/kBET,140,NA,NA,NA theislab,kbranches,theislab/kbranches,5,7,0,0,FALSE,https://github.com/theislab/kbranches,5,NA,NA,NA theislab,masterpraktikum_ssl_segmentation,theislab/masterpraktikum_ssl_segmentation,0,2,1,1,FALSE,https://github.com/theislab/masterpraktikum_ssl_segmentation,0,NA,NA,NA -theislab,moscot,theislab/moscot,91,3,38,6,FALSE,https://github.com/theislab/moscot,91,6ea9a1612b829aaa4a1c192210e340a9c08d4ac6,"fix bug in quad problem marginals (#666) +theislab,moscot,theislab/moscot,91,3,40,6,FALSE,https://github.com/theislab/moscot,91,6ea9a1612b829aaa4a1c192210e340a9c08d4ac6,"fix bug in quad problem marginals (#666) Co-authored-by: Dominik Klein ",[![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/8263290173) theislab,moscot-framework_reproducibility,theislab/moscot-framework_reproducibility,1,2,1,0,FALSE,https://github.com/theislab/moscot-framework_reproducibility,1,NA,NA,NA @@ -214,16 +189,16 @@ theislab,paga,theislab/paga,183,10,21,31,FALSE,https://github.com/theislab/paga, theislab,pancreas-targeted_pharmacology,theislab/pancreas-targeted_pharmacology,0,7,0,2,FALSE,https://github.com/theislab/pancreas-targeted_pharmacology,0,NA,NA,NA theislab,pancreatic-endocrinogenesis,theislab/pancreatic-endocrinogenesis,4,3,0,5,FALSE,https://github.com/theislab/pancreatic-endocrinogenesis,4,NA,NA,NA theislab,pdac_analysis,theislab/pdac_analysis,0,1,0,0,FALSE,https://github.com/theislab/pdac_analysis,0,NA,NA,NA -theislab,pertpy,theislab/pertpy,80,4,26,16,FALSE,https://github.com/theislab/pertpy,80,54b7f30d58905fa4e7ad83c4229281072e72b661,"Fix nox +theislab,pertpy,theislab/pertpy,80,4,27,16,FALSE,https://github.com/theislab/pertpy,80,54b7f30d58905fa4e7ad83c4229281072e72b661,"Fix nox Signed-off-by: zethson ",[![](https://github.com/theislab/pertpy/workflows/Build%20pertpy%20Package/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446183) [![](https://github.com/theislab/pertpy/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446170) [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446165) [![](https://github.com/theislab/pertpy/workflows/Run%20pertpy%20Tests/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7971446171) -theislab,pertpy,theislab/pertpy,80,4,26,16,FALSE,https://github.com/theislab/pertpy,80,b2fd0992412d94fc8c481d4feceafb49b9337f86,"[pre-commit.ci] pre-commit autoupdate (#581) +theislab,pertpy,theislab/pertpy,80,4,27,16,FALSE,https://github.com/theislab/pertpy,80,b2fd0992412d94fc8c481d4feceafb49b9337f86,"[pre-commit.ci] pre-commit autoupdate (#581) updates: - [github.com/pre-commit/pre-commit-hooks: v4.5.0 → v4.6.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.5.0...v4.6.0) -Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357836) [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357859) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357832) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357830) -theislab,pertpy,theislab/pertpy,80,4,26,16,FALSE,https://github.com/theislab/pertpy,80,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/8612357859) +theislab,pertpy,theislab/pertpy,80,4,27,16,FALSE,https://github.com/theislab/pertpy,80,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) theislab,pertpy-datasets,theislab/pertpy-datasets,1,3,0,1,FALSE,https://github.com/theislab/pertpy-datasets,1,NA,NA,NA theislab,pertpy-tutorials,theislab/pertpy-tutorials,4,4,2,7,FALSE,https://github.com/theislab/pertpy-tutorials,4,NA,NA,NA theislab,perturbation-metrics,theislab/perturbation-metrics,4,2,1,0,FALSE,https://github.com/theislab/perturbation-metrics,4,NA,NA,NA @@ -250,7 +225,7 @@ theislab,scanpy_squidpy_demo_2021,theislab/scanpy_squidpy_demo_2021,2,4,0,1,FALS theislab,scanpydoc,theislab/scanpydoc,12,6,3,5,FALSE,https://github.com/theislab/scanpydoc,12,56aa55679fa34dc2adcff72833f350f0a815472d,"[pre-commit.ci] pre-commit autoupdate (#145) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/8612417105) -theislab,scarches,theislab/scarches,307,14,37,48,FALSE,https://github.com/theislab/scarches,307,NA,NA,NA +theislab,scarches,theislab/scarches,307,14,38,48,FALSE,https://github.com/theislab/scarches,307,NA,NA,NA theislab,scarches_notebooks,theislab/scarches_notebooks,0,3,0,0,FALSE,https://github.com/theislab/scarches_notebooks,0,NA,NA,NA theislab,scatac_poisson_reproducibility,theislab/scatac_poisson_reproducibility,6,3,0,0,FALSE,https://github.com/theislab/scatac_poisson_reproducibility,6,NA,NA,NA theislab,scgen,theislab/scgen,244,9,19,50,FALSE,https://github.com/theislab/scgen,244,d79e1f04233c30f9a4eb5b8d57718127909807d7,Merge pull request #87 from theislab/batch_corr_labels,[![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) @@ -258,11 +233,11 @@ theislab,scgen-reproducibility,theislab/scgen-reproducibility,17,4,5,8,FALSE,htt theislab,scib,theislab/scib,267,15,37,58,FALSE,https://github.com/theislab/scib,NA,59ae6eee5e611d9d3db067685ec96c28804e9127,Bump version: 1.1.4 → 1.1.5,[![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/8510251633) theislab,scib-pipeline,theislab/scib-pipeline,58,7,16,26,FALSE,https://github.com/theislab/scib-pipeline,58,NA,NA,NA theislab,scib-reproducibility,theislab/scib-reproducibility,50,6,3,15,FALSE,https://github.com/theislab/scib-reproducibility,50,NA,NA,NA -theislab,scvelo,theislab/scvelo,386,13,57,102,FALSE,https://github.com/theislab/scvelo,386,b2f31b345641efdccd39fbcb8c0beaa0014b4b88,"Update `pyproject.toml` (#1226) +theislab,scvelo,theislab/scvelo,387,13,58,102,FALSE,https://github.com/theislab/scvelo,387,b2f31b345641efdccd39fbcb8c0beaa0014b4b88,"Update `pyproject.toml` (#1226) Fix package directory.",[![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) theislab,scvelo_notebooks,theislab/scvelo_notebooks,26,2,2,12,FALSE,https://github.com/theislab/scvelo_notebooks,26,NA,NA,NA -theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8608240668) +theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/8623905477) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,5fcf932c44613e6bf4063ef3075ad6062bf5d9a1,round restored counts in some affected datasets,[![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,ceb14c946f699c38d18a32192b76d4639caf845e,fix download links,[![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) theislab,sfaira-portal,theislab/sfaira-portal,0,4,2,0,FALSE,https://github.com/theislab/sfaira-portal,0,NA,NA,NA @@ -270,7 +245,7 @@ theislab,sfaira-site,theislab/sfaira-site,0,4,0,0,FALSE,https://github.com/theis theislab,sfaira_benchmarks,theislab/sfaira_benchmarks,0,3,0,0,FALSE,https://github.com/theislab/sfaira_benchmarks,0,NA,NA,NA theislab,sfaira_extension,theislab/sfaira_extension,0,3,1,0,FALSE,https://github.com/theislab/sfaira_extension,0,NA,NA,NA theislab,sfaira_tutorials,theislab/sfaira_tutorials,6,4,3,2,FALSE,https://github.com/theislab/sfaira_tutorials,6,NA,NA,NA -theislab,single-cell-best-practices,theislab/single-cell-best-practices,620,16,49,134,FALSE,https://github.com/theislab/single-cell-best-practices,620,b7335cda573f62813f404f77ad4bb4bbe85f439d,"Latest pertpy for conditions nb (#266) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,620,16,49,136,FALSE,https://github.com/theislab/single-cell-best-practices,620,b7335cda573f62813f404f77ad4bb4bbe85f439d,"Latest pertpy for conditions nb (#266) * Switch to lastest jupyterbook version @@ -283,7 +258,7 @@ Signed-off-by: zethson --------- Signed-off-by: zethson ",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064601) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064600) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064597) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/8587064598) -theislab,single-cell-best-practices,theislab/single-cell-best-practices,620,16,49,134,FALSE,https://github.com/theislab/single-cell-best-practices,620,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,620,16,49,136,FALSE,https://github.com/theislab/single-cell-best-practices,620,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) * scATAC_pp @@ -398,33 +373,19 @@ Co-authored-by: xlancelottx Co-authored-by: zethson Co-authored-by: Anna Schaar ",[![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,86,4,0,9,FALSE,https://github.com/theislab/single-cell-transformer-papers,86,NA,NA,NA -theislab,single-cell-tutorial,theislab/single-cell-tutorial,1286,30,21,437,FALSE,https://github.com/theislab/single-cell-tutorial,1286,NA,NA,NA +theislab,single-cell-tutorial,theislab/single-cell-tutorial,1288,30,21,437,FALSE,https://github.com/theislab/single-cell-tutorial,1288,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,3,5,6,3,FALSE,https://github.com/theislab/singlecell_proteomics,3,NA,NA,NA theislab,spapros,theislab/spapros,21,3,11,5,FALSE,https://github.com/theislab/spapros,21,3944b18f1dc562b93c7bf2a1b77aefb6e0c634ca,"Merge pull request #313 from theislab/release_0_1_5 -Release 0.1.5",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8485425604) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8608938944) -theislab,spapros,theislab/spapros,21,3,11,5,FALSE,https://github.com/theislab/spapros,21,3a6a2018008ac3c7764f67b64fc258d265a3a7c9,"[DEPENDABOT]: Bump ipykernel from 6.29.3 to 6.29.4 - -Bumps [ipykernel](https://github.com/ipython/ipykernel) from 6.29.3 to 6.29.4. -- [Release notes](https://github.com/ipython/ipykernel/releases) -- [Changelog](https://github.com/ipython/ipykernel/blob/v6.29.4/CHANGELOG.md) -- [Commits](https://github.com/ipython/ipykernel/compare/v6.29.3...v6.29.4) - ---- -updated-dependencies: -- dependency-name: ipykernel - dependency-type: direct:production - update-type: version-update:semver-patch -... - -Signed-off-by: dependabot[bot] ",[![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/8512286858) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/8512286860) +Release 0.1.5",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8485425604) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/8624583853) +theislab,spapros,theislab/spapros,21,3,11,5,FALSE,https://github.com/theislab/spapros,21,8a2c25d6d60b7eca00df63ebcfb3950b0d8a2e59,Adjust advanced eval tutorial,[![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/8619161325) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/8619161330) theislab,spapros-pipeline,theislab/spapros-pipeline,7,2,0,0,FALSE,https://github.com/theislab/spapros-pipeline,7,NA,NA,NA theislab,spapros-smk,theislab/spapros-smk,0,2,0,1,FALSE,https://github.com/theislab/spapros-smk,0,NA,NA,NA theislab,spapros_reproducibility,theislab/spapros_reproducibility,0,1,0,0,FALSE,https://github.com/theislab/spapros_reproducibility,0,NA,NA,NA theislab,spatial_atlas_ssl,theislab/spatial_atlas_ssl,1,2,0,0,FALSE,https://github.com/theislab/spatial_atlas_ssl,1,NA,NA,NA theislab,spatial_scog_workshop_2022,theislab/spatial_scog_workshop_2022,44,9,0,25,FALSE,https://github.com/theislab/spatial_scog_workshop_2022,44,NA,NA,NA theislab,squidpy_reproducibility,theislab/squidpy_reproducibility,8,2,0,6,FALSE,https://github.com/theislab/squidpy_reproducibility,8,NA,NA,NA -theislab,ssl_in_scg,theislab/ssl_in_scg,3,0,1,0,FALSE,https://github.com/theislab/ssl_in_scg,3,NA,NA,NA +theislab,ssl_in_scg,theislab/ssl_in_scg,3,0,0,0,FALSE,https://github.com/theislab/ssl_in_scg,3,NA,NA,NA theislab,superexacttestpy,theislab/superexacttestpy,9,2,3,0,FALSE,https://github.com/theislab/superexacttestpy,9,NA,NA,NA theislab,svaeligr,theislab/svaeligr,2,3,0,0,FALSE,https://github.com/theislab/svaeligr,2,NA,NA,NA theislab,tcellmatch,theislab/tcellmatch,37,9,3,7,FALSE,https://github.com/theislab/tcellmatch,37,NA,NA,NA
620 16 49134136 @@ -89,15 +89,15 @@

GitHub Dashboard

620 16 49134136 c06ca9
theislab/scvelo386387 135758 102 b2f31b 8 166 13 55bcbb
theislab/ehrapy 109 54241 14 27d854 theislab/ehrapy 109 54241 1447e5c084d33c
theislab/ehrapy 109 54241 1484d33c9ccc36
theislab/ncem theislab/moscot 91 33840 6 6ea9a1 theislab/pertpy 80 42627 16 @@ -250,19 +250,16 @@

GitHub Dashboard

theislab/pertpy 80 42627 16 - - - b2fd09
theislab/pertpy 80 42627 16 d00c5f 11 5 - 3944b1
3 11 5 -3a6a20 +8a2c25
theislab/hadge
theislab/graphcompass1214 1 0 0 f5c767
theislab/ehrdata4301 +a34408
theislab/gh-dashboard 1 2 0 0bf6fb91e792b
theislab/transcription_factor_activity 1 1 ced39f
theislab/idtrack 0 1 12aa73
theislab/idtrack 0 1 63e94a
theislab/idtrack 0 1
theislab/single-cell-tutorial12861288 30 21 437 theislab/scarches 307 143738 48
0
theislab/ehrdata4311
theislab/extended-single-cell-best-practices-container 4 4 2 1
theislab/feature-attribution-sc 4 2 8 1
theislab/LODE 4 2 9 0
theislab/pancreatic-endocrinogenesis 4 3 0 5
theislab/pertpy-tutorials 4 4 2 7
theislab/perturbation-metrics 4 2 1 0
theislab/jump-cpg0016-segmentation 3 0 0 0
theislab/moscot_not 3 2 8 1
theislab/multires-consensus-clustering 3 4 9 0
theislab/nbconvertR 3 3 1 2
theislab/sc_analysis_template 3 3 0 0
theislab/singlecell_proteomics 3 5 6 3
theislab/ssl_in_scg 3 010 0
theislab/2020_iPS_Lung_Differentiation 2 5 0 2
theislab/2021_Aliluev_Tritschler_gut_HFD 2 4 0 1
theislab/augurpy 2 2 10 0
theislab/bartseq-pipeline 2 4 0 3
theislab/campa_ana 2 4 0 0
theislab/covid_macrophages_integration 2 5 0 4
theislab/epicardiods_analysis 2 2 1 0
theislab/flexible_priors 2 2 0 0
theislab/gut_lineage 2 3 0 3
theislab/HPA_reproducibility 2 3 0 1
theislab/HRCA-reproducibility 2 4 0 1
theislab/LineagePulse 2 5 0 0
theislab/LungInjuryRegeneration 2 8 0 0
theislab/moscot_benchmarks 2 2 1 0
theislab/multigrate_reproducibility 2 1 0 0
theislab/scanpy_squidpy_demo_2021 2 4 0 1
theislab/svaeligr 2 3 0 0
theislab/2021_PRMT7_regulates_Monocyte_Extravasation 1 4 0 2
theislab/astrocytes_reprogramming_analysis 1 5 0 0
theislab/atlas-feature-selection-benchmark 1 2 0 0
theislab/autoencoderPS 1 3 0 2
theislab/bartSeq 1 5 1 5
theislab/bindome 1 3 5 1
theislab/countae 1 4 0 0
theislab/ehrapy-cli 1 3 0 0
theislab/ehrapy-site 1 2 0 0
theislab/ifcseq 1 3 0 1
theislab/interaction-tools 1 4 0 0
theislab/moscot-framework_reproducibility 1 2 1 0
theislab/pertpy-datasets 1 3 0 1
theislab/scPoli_legacy 1 5 0 0
theislab/spatial_atlas_ssl 1 2 0 0
theislab/tissue_reproducibility 1 3 0 0
theislab/unbalanced_monge_maps_single_cell 1 0 0 0
theislab/zebrafish_bipolarity 1 4 0 1
theislab/2015-grn-inference 0 1 0 0
theislab/2020_Inhibition_LTbetaR-signalling 0 4 0 3
theislab/2022_Bakhti_pancreas_Syt13 0 3 0 0
theislab/archmap_admin 0 2 0 0
theislab/archmap_doc 0 3 0 0
theislab/collideseq_reproducibility 0 2 0 0
theislab/consensus-clustering-evaluation 0 4 0 0
theislab/dali 0 7 0 1
theislab/edgepy 0 3 0 0
theislab/ehrapy-reproducibility 0 2 0 0
theislab/ELS_analysis 0 2 0 0
theislab/GoBI_single_cell 0 3 0 0
theislab/hadge-reproducibility 0 2 0 0
theislab/icml_cbw_2022_clcvae 0 3 0 0
theislab/integraph 0 2 4 0
theislab/ipsc_ipd_analysis 0 3 0 0
theislab/LungAgingAtlas 0 5 0 0
theislab/masterpraktikum_ssl_segmentation 0 2 1 1
theislab/MetaMap-web 0 4 2 0
theislab/MRGR_stress_analysis 0 3 0 0
theislab/multicpa-reproducibility 0 2 0 0
theislab/organoid_dexamethason_stimulation 0 3 0 1
theislab/pancreas-targeted_pharmacology 0 7 0 2
theislab/pdac_analysis 0 1 0 0
theislab/reproducability_AutoGeneS 0 3 0 0
theislab/reproducibility_AutoGeneS 0 3 0 0
theislab/scanpy.org 0 7 1 0
theislab/scanpy_neighbors 0 3 0 1
theislab/scarches_notebooks 0 3 0 0
theislab/sc_ketamine_analysis 0 4 0 0
theislab/sfaira-portal 0 4 2 0
theislab/sfaira-site 0 4 0 0
theislab/sfaira_benchmarks 0 3 0 0
theislab/sfaira_extension 0 3 1 0
theislab/spapros-smk 0 2 0 1
theislab/spapros_reproducibility 0 1 0 0
theislab/tissue 0 3