From c3c4ed0da8e8ab262748160a8a70a15723ff2265 Mon Sep 17 00:00:00 2001 From: GitHub Actions Date: Sat, 6 Jan 2024 12:11:51 +0000 Subject: [PATCH] [status] 2024-01-06 12:11:51 UTC --- README.md | 26 ++-- index.html | 341 ++++++++++++++++++++++++++--------------------------- repos.csv | 26 ++-- 3 files changed, 195 insertions(+), 198 deletions(-) diff --git a/README.md b/README.md index eca58b0..885d3e1 100644 --- a/README.md +++ b/README.md @@ -2,18 +2,18 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-01-05 12:09:49 UTC +2024-01-06 12:10:20 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 550 | 15 | 46 | 118 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718027) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718025) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718029) | 2e0a1f | -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 550 | 15 | 46 | 118 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | -| [theislab/scvelo](https://github.com/theislab/scvelo) | 371 | 13 | 52 | 100 | [![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514631) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514630) [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076589652) | 809632 | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 553 | 15 | 46 | 118 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718027) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718025) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718029) | 2e0a1f | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 553 | 15 | 46 | 118 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) | c06ca9 | +| [theislab/scvelo](https://github.com/theislab/scvelo) | 371 | 13 | 53 | 100 | [![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514631) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514630) [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076589652) | 809632 | | [theislab/cellrank](https://github.com/theislab/cellrank) | 280 | 7 | 10 | 35 | [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/7005093203) | c11a86 | | [theislab/cellrank](https://github.com/theislab/cellrank) | 280 | 7 | 10 | 35 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/7373534946) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/7373588042) | cabbd3 | -| [theislab/scib](https://github.com/theislab/scib) | 247 | 17 | 32 | 55 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/5655324075) | ed3e28 | +| [theislab/scib](https://github.com/theislab/scib) | 247 | 17 | 33 | 55 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/5655324075) | ed3e28 | | [theislab/scgen](https://github.com/theislab/scgen) | 235 | 9 | 20 | 51 | [![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) | d79e1f | -| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7416254096) | 55bcbb | +| [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7427993114) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 132 | 8 | 166 | 13 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | | [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 112 | 6 | 18 | 22 | [![](https://github.com/theislab/zellkonverter/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/6848353013) | a36390 | @@ -24,26 +24,27 @@ GitHub Dashboard | [theislab/ehrapy](https://github.com/theislab/ehrapy) | 89 | 7 | 33 | 9 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | | [theislab/ehrapy](https://github.com/theislab/ehrapy) | 89 | 7 | 33 | 9 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/7260760638) | ea6b44 | | [theislab/moscot](https://github.com/theislab/moscot) | 78 | 3 | 43 | 6 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/6456571831) | b23360 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/4629618853) | \” title=“Revert”Deleted JaxscgenPlot”“\>404835 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7431067256) | 83c035 | +| [theislab/pertpy](https://github.com/theislab/pertpy) | 67 | 4 | 31 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | | [theislab/destiny](https://github.com/theislab/destiny) | 66 | 5 | 30 | 11 | [![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) | 300eb2 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 65 | 4 | 30 | 15 | [![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/4629618853) | \” title=“Revert”Deleted JaxscgenPlot”“\>404835 | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 65 | 4 | 30 | 15 | [![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) | d00c5f | -| [theislab/pertpy](https://github.com/theislab/pertpy) | 65 | 4 | 30 | 15 | [![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850857) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850846) [![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850847) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850861) | d0c028 | | [theislab/scib-pipeline](https://github.com/theislab/scib-pipeline) | 45 | 7 | 14 | 26 | [![](https://github.com/theislab/scib-pipeline/workflows/Manual%20workflow/badge.svg)](https://github.com/theislab/scib-pipeline/actions/runs/4118363146) | 1180bc | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825767) [![](https://github.com/theislab/batchglm/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4348825761) | 11ffbb | | [theislab/batchglm](https://github.com/theislab/batchglm) | 26 | 3 | 46 | 9 | [![](https://github.com/theislab/batchglm/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/batchglm/actions/runs/4898948664) | b893fd | | [theislab/spapros](https://github.com/theislab/spapros) | 20 | 3 | 15 | 5 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088652) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088648) | 642fb3 | -| [theislab/spapros](https://github.com/theislab/spapros) | 20 | 3 | 15 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7416871607) | c4c090 | +| [theislab/spapros](https://github.com/theislab/spapros) | 20 | 3 | 15 | 5 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7428525456) | c4c090 | | [theislab/hadge](https://github.com/theislab/hadge) | 14 | 3 | 4 | 3 | [![](https://github.com/theislab/hadge/workflows/hadge%20test%20workflow/badge.svg)](https://github.com/theislab/hadge/actions/runs/7011486133) | 94067f | | [theislab/hadge](https://github.com/theislab/hadge) | 14 | 3 | 4 | 3 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7010930207) | e3c949 | | [theislab/geome](https://github.com/theislab/geome) | 13 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/geome/actions/runs/7048149542) [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/7048149538) | 0dda80 | | [theislab/geome](https://github.com/theislab/geome) | 13 | 3 | 4 | 4 | [![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) | 5bf0cd | +| [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 3 | 5 | [![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/7424343432) | 396625 | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | | [theislab/moscot_notebooks](https://github.com/theislab/moscot_notebooks) | 6 | 1 | 6 | 2 | [![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/7373563830) | bbca9f | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 4 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/4510904353) | cb7707 | | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 3 | 1 | 0 | 0 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/7102882080) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/7102882073) | 9ab01c | | [theislab/ehrdata](https://github.com/theislab/ehrdata) | 2 | 3 | 3 | 1 | [![](https://github.com/theislab/ehrdata/workflows/Test/badge.svg)](https://github.com/theislab/ehrdata/actions/runs/7375059402) | ec2924 | | [theislab/bindome](https://github.com/theislab/bindome) | 1 | 3 | 5 | 1 | [![](https://github.com/theislab/bindome/workflows/Check%20Build/badge.svg)](https://github.com/theislab/bindome/actions/runs/3619252866) [![](https://github.com/theislab/bindome/workflows/Test/badge.svg)](https://github.com/theislab/bindome/actions/runs/3619252869) | 3cb12b | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7421562060) | ab701f | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7431414384) | 625890 | | [theislab/transcription_factor_activity](https://github.com/theislab/transcription_factor_activity) | 1 | 1 | 5 | 1 | [![](https://github.com/theislab/transcription_factor_activity/workflows/Check%20Build/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287206) [![](https://github.com/theislab/transcription_factor_activity/workflows/Test/badge.svg)](https://github.com/theislab/transcription_factor_activity/actions/runs/5133287208) | ced39f | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Labeler/badge.svg)](https://github.com/theislab/idtrack/actions/runs/5369045662) | 12aa73 | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/idtrack/actions/runs/6140914377) [![](https://github.com/theislab/idtrack/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/idtrack/actions/runs/6140914379) | 1f47f4 | @@ -53,7 +54,7 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1226 | 30 | 19 | 432 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1228 | 30 | 19 | 432 | | [theislab/scarches](https://github.com/theislab/scarches) | 295 | 14 | 34 | 48 | | [theislab/dca](https://github.com/theislab/dca) | 227 | 11 | 31 | 67 | | [theislab/paga](https://github.com/theislab/paga) | 176 | 10 | 21 | 30 | @@ -85,7 +86,6 @@ GitHub Dashboard | [theislab/DeepCollisionalCrossSection](https://github.com/theislab/DeepCollisionalCrossSection) | 13 | 5 | 1 | 6 | | [theislab/multicpa](https://github.com/theislab/multicpa) | 12 | 2 | 1 | 2 | | [theislab/scanpy-in-R](https://github.com/theislab/scanpy-in-R) | 12 | 3 | 1 | 0 | -| [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 4 | 5 | | [theislab/MetaMap](https://github.com/theislab/MetaMap) | 11 | 7 | 0 | 8 | | [theislab/multigrate](https://github.com/theislab/multigrate) | 11 | 3 | 6 | 3 | | [theislab/scPoli_reproduce](https://github.com/theislab/scPoli_reproduce) | 11 | 3 | 1 | 4 | diff --git a/index.html b/index.html index 939f6b2..cbe5c11 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

GitHub Dashboard


-2024-01-05 12:11:15 UTC

+2024-01-06 12:11:43 UTC

@@ -74,7 +74,7 @@

GitHub Dashboard

- + @@ -86,7 +86,7 @@

GitHub Dashboard

- + @@ -97,7 +97,7 @@

GitHub Dashboard

- + - + @@ -147,7 +147,7 @@

GitHub Dashboard

- + @@ -249,44 +249,41 @@

GitHub Dashboard

- - - - - - - - - - + - + + + + + + + + + + - + - + - - - + + + - - - + + + @@ -333,7 +330,7 @@

GitHub Dashboard

+ @@ -374,6 +371,15 @@

GitHub Dashboard

+ + + + + + + + + @@ -382,7 +388,7 @@

GitHub Dashboard

- + @@ -391,7 +397,7 @@

GitHub Dashboard

- + @@ -400,7 +406,7 @@

GitHub Dashboard

- + @@ -410,7 +416,7 @@

GitHub Dashboard

- + @@ -419,7 +425,7 @@

GitHub Dashboard

- + @@ -429,16 +435,16 @@

GitHub Dashboard

- + - - + + - + @@ -448,7 +454,7 @@

GitHub Dashboard

- + @@ -457,7 +463,7 @@

GitHub Dashboard

- + @@ -467,7 +473,7 @@

GitHub Dashboard

- + @@ -499,7 +505,7 @@

Repos without Github Actions

- + @@ -722,867 +728,860 @@

Repos without Github Actions

- - - - - - - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + diff --git a/repos.csv b/repos.csv index e3222ff..2aa1248 100644 --- a/repos.csv +++ b/repos.csv @@ -129,7 +129,7 @@ API Update, Transform and ToIterable classes.",[![](https://github.com/theislab/ theislab,geome,theislab/geome,13,3,4,4,FALSE,https://github.com/theislab/geome,13,5bf0cd07b2ea7fa224a37f69232542a9e686c5bf,"Merge pull request #31 from theislab/template-update Automated template update from cookiecutter-scverse",[![](https://github.com/theislab/geome/workflows/Sync%20Template/badge.svg)](https://github.com/theislab/geome/actions/runs/4904831582) -theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,ab701f566b5ebf5058326ab3d270b2f0711846da,[status] 2024-01-04 12:11:14 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7421562060) +theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,62589063f9dcc4f7f54e42445fa9fff5c5456b99,[status] 2024-01-05 12:11:24 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/7431414384) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,greatpy,theislab/greatpy,8,3,4,0,FALSE,https://github.com/theislab/greatpy,8,NA,NA,NA theislab,gut_lineage,theislab/gut_lineage,2,3,0,3,FALSE,https://github.com/theislab/gut_lineage,2,NA,NA,NA @@ -201,13 +201,11 @@ theislab,organoid_dexamethason_stimulation,theislab/organoid_dexamethason_stimul theislab,paga,theislab/paga,176,10,21,30,FALSE,https://github.com/theislab/paga,176,NA,NA,NA theislab,pancreas-targeted_pharmacology,theislab/pancreas-targeted_pharmacology,0,7,0,2,FALSE,https://github.com/theislab/pancreas-targeted_pharmacology,0,NA,NA,NA theislab,pancreatic-endocrinogenesis,theislab/pancreatic-endocrinogenesis,4,3,0,5,FALSE,https://github.com/theislab/pancreatic-endocrinogenesis,4,NA,NA,NA -theislab,pertpy,theislab/pertpy,65,4,30,15,FALSE,https://github.com/theislab/pertpy,65,404835c82f9a3d943b85973c10130303d090839d,"Revert ""Deleted JaxscgenPlot"" +theislab,pertpy,theislab/pertpy,67,4,31,15,FALSE,https://github.com/theislab/pertpy,67,404835c82f9a3d943b85973c10130303d090839d,"Revert ""Deleted JaxscgenPlot"" This reverts commit 161fc137c5a23320a5799a22cd4d7212b550bca9.",[![](https://github.com/theislab/pertpy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/pertpy/actions/runs/4629618853) -theislab,pertpy,theislab/pertpy,65,4,30,15,FALSE,https://github.com/theislab/pertpy,65,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) -theislab,pertpy,theislab/pertpy,65,4,30,15,FALSE,https://github.com/theislab/pertpy,65,d0c028ba94de28b8029e8eee478ee11b3484f9c2,"Add enrichment tutorial - -Signed-off-by: zethson ",[![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850857) [![](https://github.com/theislab/pertpy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850846) [![](https://github.com/theislab/pertpy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850847) [![](https://github.com/theislab/pertpy/workflows/Test/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7414850861) +theislab,pertpy,theislab/pertpy,67,4,31,15,FALSE,https://github.com/theislab/pertpy,67,83c035045afb14697009881d415df9f250ba03dd,Replaced gallery images (#488),[![](https://github.com/theislab/pertpy/workflows/Labeler/badge.svg)](https://github.com/theislab/pertpy/actions/runs/7431067256) +theislab,pertpy,theislab/pertpy,67,4,31,15,FALSE,https://github.com/theislab/pertpy,67,d00c5f9e7243d6b1984becf973509f5f8ae425fc,pre-commit,[![](https://github.com/theislab/pertpy/workflows/Release/badge.svg)](https://github.com/theislab/pertpy/actions/runs/6737423407) theislab,pertpy-datasets,theislab/pertpy-datasets,1,3,0,1,FALSE,https://github.com/theislab/pertpy-datasets,1,NA,NA,NA theislab,pertpy-tutorials,theislab/pertpy-tutorials,4,4,1,6,FALSE,https://github.com/theislab/pertpy-tutorials,4,NA,NA,NA theislab,perturbation-metrics,theislab/perturbation-metrics,4,2,1,0,FALSE,https://github.com/theislab/perturbation-metrics,4,NA,NA,NA @@ -231,20 +229,20 @@ theislab,scanpy-in-R,theislab/scanpy-in-R,12,3,1,0,FALSE,https://github.com/thei theislab,scanpy.org,theislab/scanpy.org,0,7,1,0,FALSE,https://github.com/theislab/scanpy.org,0,NA,NA,NA theislab,scanpy_neighbors,theislab/scanpy_neighbors,0,3,0,1,FALSE,https://github.com/theislab/scanpy_neighbors,0,NA,NA,NA theislab,scanpy_squidpy_demo_2021,theislab/scanpy_squidpy_demo_2021,2,4,0,0,FALSE,https://github.com/theislab/scanpy_squidpy_demo_2021,2,NA,NA,NA -theislab,scanpydoc,theislab/scanpydoc,12,6,4,5,FALSE,https://github.com/theislab/scanpydoc,12,NA,NA,NA +theislab,scanpydoc,theislab/scanpydoc,12,6,3,5,FALSE,https://github.com/theislab/scanpydoc,12,396625bb13b50ef569075cd7b143eff5e927e0c4,Fix coverage (#114),[![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/7424343432) theislab,scarches,theislab/scarches,295,14,34,48,FALSE,https://github.com/theislab/scarches,295,NA,NA,NA theislab,scarches_notebooks,theislab/scarches_notebooks,0,3,0,0,FALSE,https://github.com/theislab/scarches_notebooks,0,NA,NA,NA theislab,scatac_poisson_reproducibility,theislab/scatac_poisson_reproducibility,6,3,0,0,FALSE,https://github.com/theislab/scatac_poisson_reproducibility,6,NA,NA,NA theislab,scgen,theislab/scgen,235,9,20,51,FALSE,https://github.com/theislab/scgen,235,d79e1f04233c30f9a4eb5b8d57718127909807d7,Merge pull request #87 from theislab/batch_corr_labels,[![](https://github.com/theislab/scgen/workflows/scgen-test/badge.svg)](https://github.com/theislab/scgen/actions/runs/6370224484) theislab,scgen-reproducibility,theislab/scgen-reproducibility,18,4,5,8,FALSE,https://github.com/theislab/scgen-reproducibility,18,NA,NA,NA -theislab,scib,theislab/scib,247,17,32,55,FALSE,https://github.com/theislab/scib,NA,ed3e2846414ca1e3dc07552c0eef1e68d82230d4,Bump version: 1.1.3 → 1.1.4,[![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/5655324075) +theislab,scib,theislab/scib,247,17,33,55,FALSE,https://github.com/theislab/scib,NA,ed3e2846414ca1e3dc07552c0eef1e68d82230d4,Bump version: 1.1.3 → 1.1.4,[![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/5655324075) theislab,scib-pipeline,theislab/scib-pipeline,45,7,14,26,FALSE,https://github.com/theislab/scib-pipeline,45,1180bcb35829d6d2984202268b4d1d11c511e20c,Merge branch 'fix/igraph_dependency' into rpy2_unpin,[![](https://github.com/theislab/scib-pipeline/workflows/Manual%20workflow/badge.svg)](https://github.com/theislab/scib-pipeline/actions/runs/4118363146) theislab,scib-reproducibility,theislab/scib-reproducibility,46,6,3,12,FALSE,https://github.com/theislab/scib-reproducibility,46,NA,NA,NA -theislab,scvelo,theislab/scvelo,371,13,52,100,FALSE,https://github.com/theislab/scvelo,371,809632e03acc958a5f13d9321981af9c1cd95460,"Update `pyproject.toml` (#1166) +theislab,scvelo,theislab/scvelo,371,13,53,100,FALSE,https://github.com/theislab/scvelo,371,809632e03acc958a5f13d9321981af9c1cd95460,"Update `pyproject.toml` (#1166) Update version number.",[![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514631) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076514630) [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/7076589652) theislab,scvelo_notebooks,theislab/scvelo_notebooks,24,2,2,12,FALSE,https://github.com/theislab/scvelo_notebooks,24,NA,NA,NA -theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7416254096) +theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,55bcbbf2588a08e4a98b1e65324119407ec6e75c,Merge pull request #741 from theislab/release,[![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7427993114) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,5fcf932c44613e6bf4063ef3075ad6062bf5d9a1,round restored counts in some affected datasets,[![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) theislab,sfaira,theislab/sfaira,132,8,166,13,FALSE,https://github.com/theislab/sfaira,132,ceb14c946f699c38d18a32192b76d4639caf845e,fix download links,[![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) theislab,sfaira-portal,theislab/sfaira-portal,0,4,2,0,FALSE,https://github.com/theislab/sfaira-portal,0,NA,NA,NA @@ -252,10 +250,10 @@ theislab,sfaira-site,theislab/sfaira-site,0,4,0,0,FALSE,https://github.com/theis theislab,sfaira_benchmarks,theislab/sfaira_benchmarks,0,3,0,0,FALSE,https://github.com/theislab/sfaira_benchmarks,0,NA,NA,NA theislab,sfaira_extension,theislab/sfaira_extension,0,3,1,0,FALSE,https://github.com/theislab/sfaira_extension,0,NA,NA,NA theislab,sfaira_tutorials,theislab/sfaira_tutorials,6,4,3,2,FALSE,https://github.com/theislab/sfaira_tutorials,6,NA,NA,NA -theislab,single-cell-best-practices,theislab/single-cell-best-practices,550,15,46,118,FALSE,https://github.com/theislab/single-cell-best-practices,550,2e0a1f475d614c86bdc91c8544870e702f67c38e,"Update differential_gene_expression.ipynb (#256) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,553,15,46,118,FALSE,https://github.com/theislab/single-cell-best-practices,553,2e0a1f475d614c86bdc91c8544870e702f67c38e,"Update differential_gene_expression.ipynb (#256) Corrected typographical and grammatical errors.",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718027) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718025) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718026) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/7338718029) -theislab,single-cell-best-practices,theislab/single-cell-best-practices,550,15,46,118,FALSE,https://github.com/theislab/single-cell-best-practices,550,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,553,15,46,118,FALSE,https://github.com/theislab/single-cell-best-practices,553,c06ca90930bd6c34220a7df594ed477aec1d6a19,"scATAC part (#162) * scATAC_pp @@ -370,7 +368,7 @@ Co-authored-by: xlancelottx Co-authored-by: zethson Co-authored-by: Anna Schaar ",[![](https://github.com/theislab/single-cell-best-practices/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/4784044952) theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,24,2,0,2,FALSE,https://github.com/theislab/single-cell-transformer-papers,24,NA,NA,NA -theislab,single-cell-tutorial,theislab/single-cell-tutorial,1226,30,19,432,FALSE,https://github.com/theislab/single-cell-tutorial,1226,NA,NA,NA +theislab,single-cell-tutorial,theislab/single-cell-tutorial,1228,30,19,432,FALSE,https://github.com/theislab/single-cell-tutorial,1228,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,3,4,4,3,FALSE,https://github.com/theislab/singlecell_proteomics,3,NA,NA,NA theislab,spapros,theislab/spapros,20,3,15,5,FALSE,https://github.com/theislab/spapros,20,642fb34d2ccbb1bb8730b239840bf1bfe06701f8,"[DEPENDABOT]: Bump importlib-resources from 5.12.0 to 6.1.1 in /docs @@ -389,7 +387,7 @@ updated-dependencies: Signed-off-by: dependabot[bot] ",[![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088652) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/6854088648) theislab,spapros,theislab/spapros,20,3,15,5,FALSE,https://github.com/theislab/spapros,20,c4c0903758ecb1acd0e16c1d227e59e8be1e28de,"Merge pull request #288 from theislab/development -Mention python package in docs",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7416871607) +Mention python package in docs",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/5980912686) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/7428525456) theislab,spapros-pipeline,theislab/spapros-pipeline,7,2,0,0,FALSE,https://github.com/theislab/spapros-pipeline,7,NA,NA,NA theislab,spapros-smk,theislab/spapros-smk,0,2,0,1,FALSE,https://github.com/theislab/spapros-smk,0,NA,NA,NA theislab,spapros_reproducibility,theislab/spapros_reproducibility,0,1,1,0,FALSE,https://github.com/theislab/spapros_reproducibility,0,NA,NA,NA
theislab/single-cell-best-practices550553 15 46 118
theislab/single-cell-best-practices550553 15 46 118 theislab/scvelo 371 135253 100 @@ -127,7 +127,7 @@

GitHub Dashboard

theislab/scib 247 173233 55 ed3e28 8 166 13 55bcbb
b23360
theislab/destiny6653011300eb2
theislab/pertpy6567 43031 15 <a href=“https://github.com/theislab/pertpy/commit/404835c82f9a3d943b85973c10130303d090839d” title=“Revert”Deleted JaxscgenPlot”“>404835
theislab/pertpy674311583c035
theislab/pertpy6567 43031 15 d00c5f
theislab/pertpy654theislab/destiny665 3015 - - -d0c02811300eb2
theislab/scib-pipeline 15 5 - c4c090
5bf0cd
theislab/scanpydoc12635396625
theislab/cellrank_notebooks 6 4 677784
theislab/moscot_notebooks 6 1 bbca9f
theislab/ehrapy-datasets 4 2 cb7707
theislab/cellrank2_reproducibility 3 1 9ab01c
theislab/ehrdata 2 3 ec2924
theislab/bindome 1 3 3cb12b
theislab/gh-dashboard 1 2 0 0ab701f625890
theislab/transcription_factor_activity 1 1 ced39f
theislab/idtrack 0 1 12aa73
theislab/idtrack 0 1 1f47f4
theislab/idtrack 0 1
theislab/single-cell-tutorial12261228 30 19 432 0
theislab/scanpydoc12645
theislab/MetaMap 11 7 0 8
theislab/multigrate 11 3 6 3
theislab/scPoli_reproduce 11 3 1 4
theislab/diffxpy_tutorials 10 8 4 2
theislab/GWAS-scRNAseq-Integration 10 5 0 12
theislab/ncem_tutorials 10 4 5 0
theislab/scAnalysisTutorial 10 3 0 3
theislab/enrichment_analysis_celltype 9 5 0 4
theislab/moslin 9 1 0 1
theislab/superexacttestpy 9 2 3 0
theislab/trvaep 9 3 0 4
theislab/cross_system_integration 8 2 10 0
theislab/expiMap_reproducibility 8 5 3 4
theislab/greatpy 8 3 4 0
theislab/inVAE 8 3 0 1
theislab/ncem_benchmarks 8 4 4 2
theislab/PathReg 8 3 0 0
theislab/sc-best-practices-ce 8 8 2 3
theislab/squidpy_reproducibility 8 2 0 5
theislab/tissue_tensorflow 8 3 0 0
theislab/2019_Strunz 7 5 1 11
theislab/2020_Mayr 7 6 0 8
theislab/cpa-reproducibility 7 3 0 1
theislab/gastrulation_analysis 7 4 0 1
theislab/mouse_cross-condition_pancreatic_islet_atlas 7 2 0 3
theislab/scachepy 7 5 3 1
theislab/scCODA_reproducibility 7 5 0 1
theislab/spapros-pipeline 7 2 0 0
theislab/theislab.github.io 7 2 9 0
theislab/IMPA 6 2 0 1
theislab/intercode 6 3 1 1
theislab/scatac_poisson_reproducibility 6 3 0 0
theislab/sfaira_tutorials 6 4 3 2
theislab/trVAE_reproducibility 6 3 2 4
theislab/2018_Angelidis 5 5 0 6
theislab/disent 5 3 0 0
theislab/ehrapy-tutorials 5 3 1 2
theislab/InterpretableAutoencoders 5 5 0 1
theislab/kbranches 5 7 0 0
theislab/neural_organoid_atlas 5 3 0 1
theislab/scanpy-demo-czbiohub 5 5 0 5
theislab/cellrank_reproducibility_preprint 4 2 0 0
theislab/extended-single-cell-best-practices-container 4 4 2 1
theislab/feature-attribution-sc 4 2 8 1
theislab/flowVI 4 3 0 0
theislab/LODE 4 2 9 0
theislab/pancreatic-endocrinogenesis 4 3 0 5
theislab/pertpy-tutorials 4 4 1 6
theislab/perturbation-metrics 4 2 1 0
theislab/2022_Tritschler_pancreas_cross_species 3 3 0 1
theislab/covid-perturbation 3 3 0 0
theislab/multires-consensus-clustering 3 4 9 0
theislab/nbconvertR 3 3 1 2
theislab/sc_analysis_template 3 3 0 0
theislab/singlecell_proteomics 3 4 4 3
theislab/2021_Aliluev_Tritschler_gut_HFD 2 4 0 1
theislab/augurpy 2 2 10 0
theislab/bartseq-pipeline 2 4 0 3
theislab/campa_ana 2 4 0 0
theislab/covid_macrophages_integration 2 5 0 4
theislab/epicardiods_analysis 2 2 1 0
theislab/flexible_priors 2 2 0 0
theislab/gut_lineage 2 3 0 3
theislab/HPA_reproducibility 2 3 0 1
theislab/HRCA-reproducibility 2 4 0 0
theislab/LineagePulse 2 5 0 0
theislab/moscot_not 2 2 8 0
theislab/multigrate_reproducibility 2 1 0 0
theislab/scanpy_squidpy_demo_2021 2 4 0 0
theislab/svaeligr 2 3 0 0
theislab/2020_iPS_Lung_Differentiation 1 5 0 2
theislab/2021_PRMT7_regulates_Monocyte_Extravasation 1 4 0 2
theislab/astrocytes_reprogramming_analysis 1 5 0 0
theislab/autoencoderPS 1 3 0 2
theislab/bartSeq 1 5 1 5
theislab/countae 1 4 0 0
theislab/ehrapy-cli 1 3 0 0
theislab/ehrapy-site 1 2 0 0
theislab/ifcseq 1 3 0 1
theislab/interaction-tools 1 4 0 0
theislab/LungInjuryRegeneration 1 8 0 0
theislab/moscot-framework_reproducibility 1 2 1 0
theislab/moscot_benchmarks 1 2 1 0
theislab/pertpy-datasets 1 3 0 1
theislab/scPoli_legacy 1 5 0 0
theislab/tissue_reproducibility 1 3 0 0
theislab/zebrafish_bipolarity 1 4 0 1
theislab/2020_Inhibition_LTbetaR-signalling 0 4 0 3
theislab/2022_Bakhti_pancreas_Syt13 0 3 0 0
theislab/archmap_admin 0 3 0 0
theislab/archmap_doc 0 3 0 0
theislab/atlas-feature-selection-benchmark 0 2 0 0
theislab/collideseq_reproducibility 0 2 0 0
theislab/consensus-clustering-evaluation 0 4 0 0
theislab/dali 0 7 0 1
theislab/edgepy 0 3 0 0
theislab/ehrapy-reproducibility 0 2 0 0
theislab/ELS_analysis 0 2 0 0
theislab/GoBI_single_cell 0 3 0 0
theislab/hadge-reproducibility 0 2 0 0
theislab/icml_cbw_2022_clcvae 0 3 0 0
theislab/integraph 0 2 4 0
theislab/ipsc_ipd_analysis 0 3 0 0
theislab/LungAgingAtlas 0 5 0 0
theislab/MetaMap-web 0 4 2 0
theislab/MRGR_stress_analysis 0 3 0 0
theislab/multicpa-reproducibility 0 2 0 0
theislab/organoid_dexamethason_stimulation 0 3 0 1
theislab/pancreas-targeted_pharmacology 0 7 0 2
theislab/reproducability_AutoGeneS 0 3 0 0
theislab/reproducibility_AutoGeneS 0 3 0 0
theislab/scanpy.org 0 7 1 0
theislab/scanpy_neighbors 0 3 0 1
theislab/scarches_notebooks 0 3 0 0
theislab/sc_ketamine_analysis 0 4 0 0
theislab/sfaira-portal 0 4 2 0
theislab/sfaira-site 0 4 0 0
theislab/sfaira_benchmarks 0 3 0 0
theislab/sfaira_extension 0 3 1 0
theislab/spapros-smk 0 2 0 1
theislab/spapros_reproducibility 0 1 1 0
theislab/spatial_atlas_ssl 0 2 0 0
theislab/tissue 0 3