From 3488811d30b34726cc48d043569a37ae34065370 Mon Sep 17 00:00:00 2001
From: Stefano Mangiola <mangiolastefano@gmail.com>
Date: Wed, 22 May 2024 16:07:39 +0930
Subject: [PATCH] update README

---
 README.md                              | 11 +++++++++--
 vignettes/Session_3_imaging_assays.Rmd |  2 +-
 2 files changed, 10 insertions(+), 3 deletions(-)

diff --git a/README.md b/README.md
index e59ae9f..a42f674 100644
--- a/README.md
+++ b/README.md
@@ -2,7 +2,7 @@
 
 <!-- badges: start -->
 [![DOI](https://zenodo.org/badge/379767139.svg)](https://zenodo.org/badge/latestdoi/379767139)
-[![Check, build, and push image](https://github.com/tidyomics/spatialOmicsWorkshop2024/actions/workflows/basic_checks.yaml/badge.svg)](https://github.com/tidyomics/spatialOmicsWorkshop2024/actions/workflows/basic_checks.yaml)
+[![Check, build, and push image](https://github.com/tidyomics/tidySpatialWorkshop2024/actions/workflows/basic_checks.yaml/badge.svg)](https://github.com/tidyomics/tidySpatialWorkshop2024/actions/workflows/basic_checks.yaml)
 <!-- badges: end -->
 
 ## Instructor names and contact information
@@ -12,10 +12,17 @@
 
 ## Syllabus
 
-Material [web page](https://tidyomics.github.io/spatialOmicsWorkshop2024/).
+Material [web page](https://tidyomics.github.io/tidySpatialWorkshop2024/)
 
 More details on the workshop are below.
 
+## Workshop partner: PHYSALIA
+
+<figure>
+<img src="inst/images/physalia-min.png" alt="visual cue" />
+<figcaption aria-hidden="true">visual cue</figcaption>
+</figure>
+
 ## Workshop package installation 
 
 If you want to install the packages and material post-workshop, the
diff --git a/vignettes/Session_3_imaging_assays.Rmd b/vignettes/Session_3_imaging_assays.Rmd
index 7088be1..d7dee10 100644
--- a/vignettes/Session_3_imaging_assays.Rmd
+++ b/vignettes/Session_3_imaging_assays.Rmd
@@ -4,7 +4,7 @@ author:
   - Stefano Mangiola, South Australian immunoGENomics Cancer Institute^[<mangiola.stefano@adelaide.edu.au>], Walter and Eliza Hall Institute^[<mangiola.s at wehi.edu.au>]
   - Luciano Martellotto, Adelaide Centre for Epigenetics, South Australian immunoGENomics Cancer Institute^[<luciano.martelotto@adelaide.edu.au>]
 output: rmarkdown::html_vignette
-# bibliography: "`r file.path(system.file(package='spatialOmicsWorkshop2024', 'vignettes'), 'tidyomics.bib')`"
+# bibliography: "`r file.path(system.file(package='tidySpatialWorkshop2024', 'vignettes'), 'tidyomics.bib')`"
 vignette: >
   %\VignetteIndexEntry{Imaging assays (tidy)}
   %\VignetteEncoding{UTF-8}