diff --git a/devtools/conda-envs/dev-build.yml b/devtools/conda-envs/dev-build.yml index 7bdb8d0..997db53 100644 --- a/devtools/conda-envs/dev-build.yml +++ b/devtools/conda-envs/dev-build.yml @@ -1,4 +1,4 @@ -name: polymerist-explicit +name: polymerist-dev channels: - openeye - conda-forge @@ -6,483 +6,533 @@ channels: dependencies: - _libgcc_mutex=0.1=conda_forge - _openmp_mutex=4.5=2_gnu - - absl-py=2.1.0=pyhd8ed1ab_0 - - aiohttp=3.9.3=py311h459d7ec_0 - - aiosignal=1.3.1=pyhd8ed1ab_0 + - absl-py=2.1.0=pyhd8ed1ab_1 + - alabaster=1.0.0=pyhd8ed1ab_1 + - alsa-lib=1.2.13=hb9d3cd8_0 - ambertools=23.3=py311h9fea076_6 - - annotated-types=0.6.0=pyhd8ed1ab_0 - - anyio=4.3.0=pyhd8ed1ab_0 + - annotated-types=0.7.0=pyhd8ed1ab_1 + - anyio=4.7.0=pyhd8ed1ab_0 - anytree=2.12.1=pyhd8ed1ab_0 - - argon2-cffi=23.1.0=pyhd8ed1ab_0 - - argon2-cffi-bindings=21.2.0=py311h459d7ec_4 + - argon2-cffi=23.1.0=pyhd8ed1ab_1 + - argon2-cffi-bindings=21.2.0=py311h9ecbd09_5 - arpack=3.8.0=nompi_h0baa96a_101 - - arrow=1.3.0=pyhd8ed1ab_0 - - ase=3.22.1=pyhd8ed1ab_1 - - asttokens=2.4.1=pyhd8ed1ab_0 - - astunparse=1.6.3=pyhd8ed1ab_0 - - async-lru=2.0.4=pyhd8ed1ab_0 - - attrs=23.2.0=pyh71513ae_0 - - aws-c-auth=0.7.11=h0b4cabd_1 - - aws-c-cal=0.6.9=h14ec70c_3 - - aws-c-common=0.9.12=hd590300_0 - - aws-c-compression=0.2.17=h572eabf_8 - - aws-c-event-stream=0.4.1=h97bb272_2 - - aws-c-http=0.8.0=h9129f04_2 - - aws-c-io=0.14.0=hf8f278a_1 - - aws-c-mqtt=0.10.1=h2b97f5f_0 - - aws-c-s3=0.4.9=hca09fc5_0 - - aws-c-sdkutils=0.1.13=h572eabf_1 - - aws-checksums=0.1.17=h572eabf_7 - - aws-crt-cpp=0.26.0=h04327c0_8 - - aws-sdk-cpp=1.11.210=hba3e011_10 - - babel=2.14.0=pyhd8ed1ab_0 - - beautifulsoup4=4.12.3=pyha770c72_0 - - binutils_impl_linux-64=2.40=hf600244_0 - - binutils_linux-64=2.40=hbdbef99_2 - - bleach=6.1.0=pyhd8ed1ab_0 - - blinker=1.7.0=pyhd8ed1ab_0 - - blosc=1.21.5=h0f2a231_0 - - boltons=23.1.1=pyhd8ed1ab_0 - - brotli=1.1.0=hd590300_1 - - brotli-bin=1.1.0=hd590300_1 - - brotli-python=1.1.0=py311hb755f60_1 - - bson=0.5.9=py_0 - - bzip2=1.0.8=hd590300_5 - - c-ares=1.27.0=hd590300_0 - - c-blosc2=2.12.0=hb4ffafa_0 - - ca-certificates=2024.7.4=hbcca054_0 + - arrow=1.3.0=pyhd8ed1ab_1 + - ase=3.23.0=pyhd8ed1ab_0 + - asttokens=3.0.0=pyhd8ed1ab_1 + - astunparse=1.6.3=pyhd8ed1ab_2 + - async-lru=2.0.4=pyhd8ed1ab_1 + - attr=2.5.1=h166bdaf_1 + - attrs=24.3.0=pyh71513ae_0 + - aws-c-auth=0.7.31=h57bd9a3_0 + - aws-c-cal=0.7.4=hfd43aa1_1 + - aws-c-common=0.9.28=hb9d3cd8_0 + - aws-c-compression=0.2.19=h756ea98_1 + - aws-c-event-stream=0.4.3=h29ce20c_2 + - aws-c-http=0.8.10=h5e77a74_0 + - aws-c-io=0.14.18=h2af50b2_12 + - aws-c-mqtt=0.10.7=h02abb05_0 + - aws-c-s3=0.6.6=h834ce55_0 + - aws-c-sdkutils=0.1.19=h756ea98_3 + - aws-checksums=0.1.20=h756ea98_0 + - aws-crt-cpp=0.28.3=h3e6eb3e_6 + - aws-sdk-cpp=1.11.379=h9f1560d_11 + - azure-core-cpp=1.13.0=h935415a_0 + - azure-identity-cpp=1.8.0=hd126650_2 + - azure-storage-blobs-cpp=12.12.0=hd2e3451_0 + - azure-storage-common-cpp=12.7.0=h10ac4d7_1 + - azure-storage-files-datalake-cpp=12.11.0=h325d260_1 + - babel=2.16.0=pyhd8ed1ab_1 + - backports=1.0=pyhd8ed1ab_5 + - backports.tarfile=1.2.0=pyhd8ed1ab_1 + - beautifulsoup4=4.12.3=pyha770c72_1 + - bleach=6.2.0=pyhd8ed1ab_1 + - blinker=1.9.0=pyhff2d567_0 + - blosc=1.21.6=hef167b5_0 + - boltons=24.0.0=pyhd8ed1ab_1 + - brotli=1.1.0=hb9d3cd8_2 + - brotli-bin=1.1.0=hb9d3cd8_2 + - brotli-python=1.1.0=py311hfdbb021_2 + - bson=0.5.9=pyhd8ed1ab_1 + - build=0.10.0=py311h06a4308_0 + - bzip2=1.0.8=h4bc722e_7 + - c-ares=1.34.4=hb9d3cd8_0 + - c-blosc2=2.15.2=h68e2383_0 + - ca-certificates=2024.12.14=hbcca054_0 - cached-property=1.5.2=hd8ed1ab_1 - cached_property=1.5.2=pyha770c72_1 - - cachetools=5.3.3=pyhd8ed1ab_0 - - cairo=1.18.0=h3faef2a_0 - - certifi=2024.7.4=pyhd8ed1ab_0 - - cffi=1.16.0=py311hb3a22ac_0 - - chardet=5.2.0=py311h38be061_1 - - charset-normalizer=3.3.2=pyhd8ed1ab_0 - - chemspipy=2.0.0=py_0 + - cachetools=5.5.0=pyhd8ed1ab_1 + - cairo=1.18.0=hbb29018_2 + - certifi=2024.12.14=pyhd8ed1ab_0 + - cffi=1.17.1=py311hf29c0ef_0 + - chardet=5.2.0=py311h38be061_2 + - charset-normalizer=3.4.0=pyhd8ed1ab_1 - cirpy=1.0.2=py_0 - - click=8.1.7=unix_pyh707e725_0 + - click=8.1.7=unix_pyh707e725_1 - click-option-group=0.5.6=pyhd8ed1ab_0 - - cloudpickle=3.0.0=pyhd8ed1ab_0 - - cmake=3.28.3=hcfe8598_0 - - colorama=0.4.6=pyhd8ed1ab_0 - - comm=0.2.1=pyhd8ed1ab_0 - - contourpy=1.2.0=py311h9547e67_0 - - cryptography=42.0.5=py311h63ff55d_0 + - cloudpickle=3.1.0=pyhd8ed1ab_1 + - cmarkgfm=2024.11.20=py311h9ecbd09_0 + - codecov=2.1.13=pyhd8ed1ab_0 + - colorama=0.4.6=pyhd8ed1ab_1 + - comm=0.2.2=pyhd8ed1ab_1 + - contourpy=1.3.1=py311hd18a35c_0 + - coverage=7.6.9=py311h2dc5d0c_0 + - cryptography=44.0.0=py311hafd3f86_0 - cudatoolkit=11.8.0=h4ba93d1_13 - - cycler=0.12.1=pyhd8ed1ab_0 - - cytoolz=0.12.3=py311h459d7ec_0 - - dask-core=2024.2.1=pyhd8ed1ab_0 - - dask-jobqueue=0.8.5=pyhd8ed1ab_0 - - debugpy=1.8.1=py311hb755f60_0 - - decorator=5.1.1=pyhd8ed1ab_0 + - cycler=0.12.1=pyhd8ed1ab_1 + - cytoolz=1.0.1=py311h9ecbd09_0 + - dask-core=2024.12.1=pyhd8ed1ab_0 + - dask-jobqueue=0.9.0=pyhd8ed1ab_0 + - dbus=1.13.6=h5008d03_3 + - debugpy=1.8.11=py311hfdbb021_0 + - decorator=5.1.1=pyhd8ed1ab_1 - defusedxml=0.7.1=pyhd8ed1ab_0 - - distributed=2024.2.1=pyhd8ed1ab_0 + - dgl=2.1.0=py311h1772aec_2 + - distributed=2024.12.1=pyhd8ed1ab_0 + - docutils=0.21.2=pyhd8ed1ab_1 + - double-conversion=3.3.0=h59595ed_0 - ele=0.2.0=pyhd8ed1ab_0 - - entrypoints=0.4=pyhd8ed1ab_0 - - exceptiongroup=1.2.0=pyhd8ed1ab_2 - - executing=2.0.1=pyhd8ed1ab_0 - - expat=2.5.0=hcb278e6_1 - - f90wrap=0.2.13=py311hbc92942_2 - - fftw=3.3.10=mpi_openmpi_h4a81ba8_8 - - filelock=3.13.1=pyhd8ed1ab_0 - - flask=3.0.2=pyhd8ed1ab_0 - - flatbuffers=23.5.26=h59595ed_1 + - entrypoints=0.4=pyhd8ed1ab_1 + - exceptiongroup=1.2.2=pyhd8ed1ab_1 + - executing=2.1.0=pyhd8ed1ab_1 + - expat=2.6.4=h5888daf_0 + - f90wrap=0.2.16=py311hcc61034_1 + - fftw=3.3.10=mpi_openmpi_h99e62ba_10 + - filelock=3.16.1=pyhd8ed1ab_1 + - flask=3.1.0=pyhff2d567_0 + - flatbuffers=24.3.25=h59595ed_0 - font-ttf-dejavu-sans-mono=2.37=hab24e00_0 - font-ttf-inconsolata=3.000=h77eed37_0 - font-ttf-source-code-pro=2.038=h77eed37_0 - - font-ttf-ubuntu=0.83=h77eed37_1 - - fontconfig=2.14.2=h14ed4e7_0 + - font-ttf-ubuntu=0.83=h77eed37_3 + - fontconfig=2.15.0=h7e30c49_1 - fonts-conda-ecosystem=1=0 - fonts-conda-forge=1=0 - - fonttools=4.49.0=py311h459d7ec_0 - - fqdn=1.5.1=pyhd8ed1ab_0 + - fonttools=4.55.3=py311h2dc5d0c_0 + - forcefield-utilities=0.3.0=pyhd8ed1ab_0 + - foyer=1.0.0=pyhd8ed1ab_0 + - fqdn=1.5.1=pyhd8ed1ab_1 - freetype=2.12.1=h267a509_2 - freetype-py=2.3.0=pyhd8ed1ab_0 - - frozenlist=1.4.1=py311h459d7ec_0 - - fsspec=2024.2.0=pyhca7485f_0 - - gast=0.5.4=pyhd8ed1ab_0 - - gawk=5.3.0=ha916aea_0 - - gcc_impl_linux-64=11.4.0=h7aa1c59_5 - - gcc_linux-64=11.4.0=hfd045f2_2 - - gettext=0.21.1=h27087fc_0 - - gflags=2.2.2=he1b5a44_1004 - - gfortran_impl_linux-64=11.4.0=h86428dc_5 - - gfortran_linux-64=11.4.0=h3047280_2 - - giflib=5.2.1=h0b41bf4_3 - - glog=0.6.0=h6f12383_0 - - gmp=6.3.0=h59595ed_0 - - gmpy2=2.1.2=py311h6a5fa03_1 - - google-auth=2.28.1=pyhca7485f_0 - - google-auth-oauthlib=1.2.0=pyhd8ed1ab_0 - - google-pasta=0.2.0=pyh8c360ce_0 - - greenlet=3.0.3=py311hb755f60_0 - - grpcio=1.59.3=py311ha6695c7_0 + - fsspec=2024.10.0=pyhd8ed1ab_1 + - gast=0.6.0=pyhd8ed1ab_0 + - gawk=5.3.1=hcd3d067_0 + - gettext=0.22.5=he02047a_3 + - gettext-tools=0.22.5=he02047a_3 + - gflags=2.2.2=h5888daf_1005 + - giflib=5.2.2=hd590300_0 + - glog=0.7.1=hbabe93e_0 + - gmp=6.3.0=hac33072_2 + - gmpy2=2.1.5=py311h0f6cedb_3 + - gmso=0.12.4=pyhd8ed1ab_1 + - google-pasta=0.2.0=pyhd8ed1ab_2 + - graphite2=1.3.13=h59595ed_1003 + - greenlet=3.1.1=py311hfdbb021_1 + - grpcio=1.62.2=py311ha6695c7_0 - gsl=2.7=he838d99_0 - - gxx_impl_linux-64=11.4.0=h7aa1c59_5 - - gxx_linux-64=11.4.0=hfc1ae95_2 - - h11=0.14.0=pyhd8ed1ab_0 - - h2=4.1.0=pyhd8ed1ab_0 - - h5py=3.10.0=nompi_py311hebc2b07_101 + - h11=0.14.0=pyhd8ed1ab_1 + - h2=4.1.0=pyhd8ed1ab_1 + - h5py=3.12.1=nompi_py311hb639ac4_103 + - harfbuzz=9.0.0=hfac3d4d_0 - hdf4=4.2.15=h2a13503_7 - - hdf5=1.14.3=mpi_openmpi_h327c9cf_0 - - hpack=4.0.0=pyh9f0ad1d_0 - - httpcore=1.0.4=pyhd8ed1ab_0 - - httpx=0.27.0=pyhd8ed1ab_0 - - hyperframe=6.0.1=pyhd8ed1ab_0 + - hdf5=1.14.3=mpi_openmpi_h39ae36c_8 + - hpack=4.0.0=pyhd8ed1ab_1 + - httpcore=1.0.7=pyh29332c3_1 + - httpx=0.28.1=pyhd8ed1ab_0 + - hyperframe=6.0.1=pyhd8ed1ab_1 - icu=73.2=h59595ed_0 - - idna=3.6=pyhd8ed1ab_0 - - importlib-metadata=7.0.1=pyha770c72_0 - - importlib_metadata=7.0.1=hd8ed1ab_0 - - importlib_resources=6.1.2=pyhd8ed1ab_0 - - iniconfig=2.0.0=pyhd8ed1ab_0 - - ipykernel=6.29.3=pyhd33586a_0 - - ipython=8.22.1=pyh707e725_0 - - ipython_genutils=0.2.0=py_1 + - idna=3.10=pyhd8ed1ab_1 + - imagesize=1.4.1=pyhd8ed1ab_0 + - importlib-metadata=8.5.0=pyha770c72_1 + - importlib_resources=6.4.5=pyhd8ed1ab_1 + - iniconfig=2.0.0=pyhd8ed1ab_1 + - ipykernel=6.29.5=pyh3099207_0 + - ipython=8.30.0=pyh707e725_0 - ipywidgets=8.0.4=pyhd8ed1ab_0 - - isoduration=20.11.0=pyhd8ed1ab_0 - - itsdangerous=2.1.2=pyhd8ed1ab_0 - - jedi=0.19.1=pyhd8ed1ab_0 - - jinja2=3.1.3=pyhd8ed1ab_0 - - joblib=1.3.2=pyhd8ed1ab_0 - - json5=0.9.17=pyhd8ed1ab_0 - - jsonpointer=2.4=py311h38be061_3 - - jsonschema=4.21.1=pyhd8ed1ab_0 - - jsonschema-specifications=2023.12.1=pyhd8ed1ab_0 - - jsonschema-with-format-nongpl=4.21.1=pyhd8ed1ab_0 - - jupyter=1.0.0=pyhd8ed1ab_10 - - jupyter-lsp=2.2.3=pyhd8ed1ab_0 - - jupyter_client=8.6.0=pyhd8ed1ab_0 - - jupyter_console=6.6.3=pyhd8ed1ab_0 - - jupyter_core=5.7.1=py311h38be061_0 - - jupyter_events=0.9.0=pyhd8ed1ab_0 - - jupyter_server=2.12.5=pyhd8ed1ab_0 - - jupyter_server_terminals=0.5.2=pyhd8ed1ab_0 - - jupyterlab=4.1.2=pyhd8ed1ab_0 - - jupyterlab_pygments=0.3.0=pyhd8ed1ab_1 - - jupyterlab_server=2.25.3=pyhd8ed1ab_0 - - jupyterlab_widgets=3.0.10=pyhd8ed1ab_0 - - keras=2.15.0=pyhd8ed1ab_0 - - kernel-headers_linux-64=2.6.32=he073ed8_17 + - isoduration=20.11.0=pyhd8ed1ab_1 + - itsdangerous=2.2.0=pyhd8ed1ab_1 + - jaraco.classes=3.4.0=pyhd8ed1ab_2 + - jaraco.context=6.0.1=pyhd8ed1ab_0 + - jaraco.functools=4.1.0=pyhd8ed1ab_0 + - jedi=0.19.2=pyhd8ed1ab_1 + - jeepney=0.8.0=pyhd8ed1ab_0 + - jinja2=3.1.4=pyhd8ed1ab_1 + - joblib=1.4.2=pyhd8ed1ab_1 + - json5=0.10.0=pyhd8ed1ab_1 + - jsonpointer=3.0.0=py311h38be061_1 + - jsonschema=4.23.0=pyhd8ed1ab_1 + - jsonschema-specifications=2024.10.1=pyhd8ed1ab_1 + - jsonschema-with-format-nongpl=4.23.0=hd8ed1ab_1 + - jupyter-lsp=2.2.5=pyhd8ed1ab_1 + - jupyter_client=8.6.3=pyhd8ed1ab_1 + - jupyter_core=5.7.2=pyh31011fe_1 + - jupyter_events=0.11.0=pyhd8ed1ab_0 + - jupyter_server=2.14.2=pyhd8ed1ab_1 + - jupyter_server_terminals=0.5.3=pyhd8ed1ab_1 + - jupyterlab=4.3.4=pyhd8ed1ab_0 + - jupyterlab_pygments=0.3.0=pyhd8ed1ab_2 + - jupyterlab_server=2.27.3=pyhd8ed1ab_1 + - jupyterlab_widgets=3.0.13=pyhd8ed1ab_1 + - keras=3.7.0=pyh753f3f9_1 + - kernel-headers_linux-64=3.10.0=he073ed8_18 + - keyring=25.5.0=pyha804496_1 - keyutils=1.6.1=h166bdaf_0 - - kim-api=2.3.0=h097297d_1 - - kiwisolver=1.4.5=py311h9547e67_1 - - krb5=1.21.2=h659d440_0 - - lammps=2023.11.21=cpu_py311_hbb7bd43_mpi_openmpi_4 + - kim-api=2.2.1=h5c8ed42_0 + - kiwisolver=1.4.7=py311hd18a35c_0 + - krb5=1.21.3=h659f571_0 + - lammps=2024.08.29=cpu_py311_h81f0c5c_mpi_openmpi_0 + - lark=1.2.2=pyhd8ed1ab_0 - lcms2=2.16=hb7c19ff_0 - - ld_impl_linux-64=2.40=h41732ed_0 + - ld_impl_linux-64=2.43=h712a8e2_2 - lerc=4.0.0=h27087fc_0 - - libabseil=20230802.1=cxx17_h59595ed_0 - - libaec=1.1.2=h59595ed_1 - - libarrow=15.0.0=h84dd17c_0_cpu - - libarrow-acero=15.0.0=h59595ed_0_cpu - - libarrow-dataset=15.0.0=h59595ed_0_cpu - - libarrow-flight=15.0.0=h120cb0d_0_cpu - - libarrow-flight-sql=15.0.0=h61ff412_0_cpu - - libarrow-gandiva=15.0.0=hacb8726_0_cpu - - libarrow-substrait=15.0.0=h61ff412_0_cpu - - libblas=3.9.0=21_linux64_openblas + - libabseil=20240116.2=cxx17_he02047a_1 + - libaec=1.1.3=h59595ed_0 + - libarrow=17.0.0=h200f1f0_15_cpu + - libarrow-acero=17.0.0=h5888daf_15_cpu + - libarrow-dataset=17.0.0=h5888daf_15_cpu + - libarrow-substrait=17.0.0=hf54134d_15_cpu + - libasprintf=0.22.5=he8f35ee_3 + - libasprintf-devel=0.22.5=he8f35ee_3 + - libblas=3.9.0=26_linux64_openblas - libboost=1.82.0=h6fcfa73_6 - libboost-python=1.82.0=py311h92ebd52_6 - - libbrotlicommon=1.1.0=hd590300_1 - - libbrotlidec=1.1.0=hd590300_1 - - libbrotlienc=1.1.0=hd590300_1 - - libcblas=3.9.0=21_linux64_openblas + - libbrotlicommon=1.1.0=hb9d3cd8_2 + - libbrotlidec=1.1.0=hb9d3cd8_2 + - libbrotlienc=1.1.0=hb9d3cd8_2 + - libcap=2.71=h39aace5_0 + - libcblas=3.9.0=26_linux64_openblas + - libclang-cpp18.1=18.1.8=default_hf981a13_5 + - libclang13=19.1.2=default_h9c6a7e4_1 - libcrc32c=1.1.2=h9c3ff4c_0 - - libcurl=8.5.0=hca28451_0 - - libdeflate=1.19=hd590300_0 + - libcups=2.3.3=h4637d8d_4 + - libcurl=8.11.1=h332b0f4_0 + - libdeflate=1.23=h4ddbbb0_0 + - libdrm=2.4.124=hb9d3cd8_0 - libedit=3.1.20191231=he28a2e2_2 + - libegl=1.7.0=ha4b6fd6_2 - libev=4.33=hd590300_2 - libevent=2.1.12=hf998b51_1 - - libexpat=2.5.0=hcb278e6_1 + - libexpat=2.6.4=h5888daf_0 + - libfabric=1.22.0=ha770c72_3 + - libfabric1=1.22.0=ha594dbc_3 - libffi=3.4.2=h7f98852_5 - - libgcc-devel_linux-64=11.4.0=h922705a_105 - - libgcc-ng=13.2.0=h807b86a_5 - - libgfortran-ng=13.2.0=h69a702a_5 - - libgfortran5=13.2.0=ha4646dd_5 - - libglib=2.78.4=h783c2da_0 - 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libparquet=17.0.0=h39682fd_15_cpu + - libpciaccess=0.18=hd590300_0 + - libpnetcdf=1.13.0=mpi_openmpi_h521bef2_1 + - libpng=1.6.44=hadc24fc_0 + - libpq=16.6=h035377e_1 + - libprotobuf=4.25.3=hd5b35b9_1 + - libre2-11=2023.09.01=h5a48ba9_2 + - libsodium=1.0.20=h4ab18f5_0 + - libsqlite=3.47.2=hee588c1_0 + - libssh2=1.11.1=hf672d98_0 + - libstdcxx=14.2.0=hc0a3c3a_1 + - libstdcxx-ng=14.2.0=h4852527_1 + - libsystemd0=256.9=h2774228_0 + - libthrift=0.20.0=h0e7cc3e_1 + - libtiff=4.7.0=hd9ff511_3 + - libtorch=2.3.1=cpu_generic_h970db74_0 + - libudev1=256.9=h9a4d06a_2 - libunistring=0.9.10=h7f98852_0 - - libutf8proc=2.8.0=h166bdaf_0 + - liburing=2.6=h297d8ca_0 + - libutf8proc=2.8.0=hf23e847_1 - libuuid=2.38.1=h0b41bf4_0 - - libuv=1.47.0=hd590300_0 - - libwebp-base=1.3.2=hd590300_0 - - libxcb=1.15=h0b41bf4_0 + - libuv=1.49.2=hb9d3cd8_0 + - libwebp-base=1.4.0=hd590300_0 + - libxcb=1.17.0=h8a09558_0 - libxcrypt=4.4.36=hd590300_1 - - libxml2=2.12.5=h232c23b_0 + - libxkbcommon=1.7.0=h2c5496b_1 + - libxml2=2.12.7=h4c95cb1_3 - 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mdtraj=1.10.2=py311h2ed89a0_0 + - mdurl=0.1.2=pyhd8ed1ab_1 - metis=5.1.1=h59595ed_2 - - mistune=3.0.2=pyhd8ed1ab_0 - - ml_dtypes=0.2.0=py311h320fe9a_2 - - mlip=3.0=mpi_openmpi_h7b20f27_1 - - mpc=1.3.1=hfe3b2da_0 - - mpfr=4.2.1=h9458935_0 + - mistune=3.0.2=pyhd8ed1ab_1 + - ml_dtypes=0.3.2=py311h320fe9a_0 + - mlip=3.0=mpi_openmpi_h312e9eb_2 + - more-itertools=10.5.0=pyhd8ed1ab_1 + - mpc=1.3.1=h24ddda3_1 + - mpfr=4.2.1=h90cbb55_3 - mpi=1.0=openmpi - - mpmath=1.3.0=pyhd8ed1ab_0 - - msgpack-python=1.0.7=py311h9547e67_0 - - multidict=6.0.5=py311h459d7ec_0 + - mpi4py=4.0.1=py311ha982e2a_0 + - mpmath=1.3.0=pyhd8ed1ab_1 + - msgpack-python=1.1.0=py311hd18a35c_0 - munkres=1.1.4=pyh9f0ad1d_0 - - n2p2=2.2.0=mpi_openmpi_py311_h84d189c_105 - - nbclient=0.8.0=pyhd8ed1ab_0 - - nbconvert=7.16.1=pyhd8ed1ab_0 - - nbconvert-core=7.16.1=pyhd8ed1ab_0 - - nbconvert-pandoc=7.16.1=pyhd8ed1ab_0 - - nbformat=5.9.2=pyhd8ed1ab_0 - - ncurses=6.4=h59595ed_2 - - nest-asyncio=1.6.0=pyhd8ed1ab_0 - - netcdf-fortran=4.6.1=mpi_openmpi_hc1a8302_3 - 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openff-amber-ff-ports=0.0.4=pyhca7485f_0 - - openff-forcefields=2024.01.0=pyhca7485f_0 - - openff-interchange=0.3.28=pyhd8ed1ab_0 - - openff-interchange-base=0.3.28=pyhd8ed1ab_0 - - openff-models=0.1.2=pyhca7485f_0 - - openff-nagl=0.3.4=pyhd8ed1ab_0 - - openff-nagl-base=0.3.4=pyhd8ed1ab_0 - - openff-nagl-models=0.1.2=pyhd8ed1ab_0 - - openff-recharge=0.5.1=pyhd8ed1ab_0 - - openff-toolkit=0.16.1=pyhd8ed1ab_1 - - openff-toolkit-base=0.16.1=pyhd8ed1ab_1 - - openff-units=0.2.1=pyh1a96a4e_0 - - openff-utilities=0.1.12=pyhd8ed1ab_0 - - openjpeg=2.5.2=h488ebb8_0 - - openmm=8.1.1=py311h6d2dbb8_1 - - openmpi=4.1.6=hc5af2df_101 - - openssl=3.3.1=h4bc722e_2 - - opt_einsum=3.3.0=pyhc1e730c_2 - - orc=1.9.2=h4b38347_0 + - openff-forcefields=2024.09.0=pyhff2d567_0 + - openff-interchange=0.4.0=pyhd8ed1ab_0 + - openff-interchange-base=0.4.0=pyhd8ed1ab_0 + - openff-nagl=0.5.0=pyhd8ed1ab_0 + - openff-nagl-base=0.5.0=pyhd8ed1ab_0 + - openff-nagl-models=0.3.0=pyhd8ed1ab_1 + - openff-recharge=0.5.2=pyhd8ed1ab_0 + - 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python_abi=3.11=5_cp311 + - pytorch=2.3.1=cpu_generic_py311h8ca351a_0 + - pytorch-lightning=2.4.0=pyh101cb37_1 - pytz=2024.1=pyhd8ed1ab_0 - - pyu2f=0.1.5=pyhd8ed1ab_0 - - pyyaml=6.0.1=py311h459d7ec_1 - - pyzmq=25.1.2=py311h34ded2d_0 - - qtconsole-base=5.5.1=pyha770c72_0 - - qtpy=2.4.1=pyhd8ed1ab_0 + - pyyaml=6.0.2=py311h9ecbd09_1 + - pyzmq=26.2.0=py311h7deb3e3_3 + - qhull=2020.2=h434a139_5 + - qt6-main=6.7.2=h7d13b96_3 - quippy=0.9.14=py311h4189ce2_0 - - rdkit=2023.09.5=py311h4c2f14b_0 - - rdma-core=50.0=hd3aeb46_1 - - re2=2023.09.01=h7f4b329_1 + - rdkit=2023.09.6=py311h4c2f14b_0 + - rdma-core=55.0=h5888daf_0 + - re2=2023.09.01=h7f4b329_2 - readline=8.2=h8228510_1 - - referencing=0.33.0=pyhd8ed1ab_0 - - reportlab=4.1.0=py311h459d7ec_0 - - requests=2.31.0=pyhd8ed1ab_0 - - requests-oauthlib=1.3.1=pyhd8ed1ab_0 - - rfc3339-validator=0.1.4=pyhd8ed1ab_0 + - readme_renderer=44.0=pyhd8ed1ab_1 + - referencing=0.35.1=pyhd8ed1ab_1 + - reportlab=4.2.5=py311h9ecbd09_0 + - requests=2.32.3=pyhd8ed1ab_1 + - requests-toolbelt=1.0.0=pyhd8ed1ab_1 + - rfc3339-validator=0.1.4=pyhd8ed1ab_1 + - rfc3986=2.0.0=pyhd8ed1ab_1 - rfc3986-validator=0.1.1=pyh9f0ad1d_0 - - rhash=1.4.4=hd590300_0 - - rich=13.7.1=pyhd8ed1ab_0 + - rich=13.9.4=pyhd8ed1ab_1 - rlpycairo=0.2.0=pyhd8ed1ab_0 - - rpds-py=0.18.0=py311h46250e7_0 - - rsa=4.9=pyhd8ed1ab_0 - - s2n=1.4.1=h06160fa_0 - - scipy=1.12.0=py311h64a7726_2 - - send2trash=1.8.2=pyh41d4057_0 - - setuptools=69.1.1=pyhd8ed1ab_0 - - six=1.16.0=pyh6c4a22f_0 - - sleef=3.5.1=h9b69904_2 + - rpds-py=0.22.3=py311h9e33e62_0 + - s2n=1.5.5=h3931f03_0 + - scipy=1.13.1=py311h517d4fd_0 + - secretstorage=3.3.3=py311h38be061_3 + - send2trash=1.8.3=pyh0d859eb_1 + - setuptools=75.6.0=pyhff2d567_1 + - six=1.17.0=pyhd8ed1ab_0 + - sleef=3.7=h1b44611_2 - smirnoff99frosst=1.1.0=pyh44b312d_0 - - snappy=1.1.10=h9fff704_0 - - sniffio=1.3.1=pyhd8ed1ab_0 + - snappy=1.2.1=h8bd8927_1 + - sniffio=1.3.1=pyhd8ed1ab_1 + - snowballstemmer=2.2.0=pyhd8ed1ab_0 - sortedcontainers=2.4.0=pyhd8ed1ab_0 - soupsieve=2.5=pyhd8ed1ab_1 - 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symengine=0.13.0=h95c1f20_3 + - sympy=1.13.3=pypyh2585a3b_103 + - sysroot_linux-64=2.17=h4a8ded7_18 + - tblib=3.0.0=pyhd8ed1ab_1 + - tensorboard=2.16.2=pyhd8ed1ab_0 + - tensorboard-data-server=0.7.0=py311hafd3f86_2 + - tensorflow=2.16.2=cpu_py311h6ac8430_0 + - tensorflow-base=2.16.2=cpu_py311h7888847_0 + - tensorflow-estimator=2.16.2=cpu_py311hbc9741f_0 + - termcolor=2.5.0=pyhd8ed1ab_1 + - terminado=0.18.1=pyh0d859eb_0 + - tinycss2=1.4.0=pyhd8ed1ab_0 - tk=8.6.13=noxft_h4845f30_101 - - tomli=2.0.1=pyhd8ed1ab_0 - - toolz=0.12.1=pyhd8ed1ab_0 - - torchdata=0.7.1=py311h85129bf_1 - - torchmetrics=1.2.1=pyhd8ed1ab_0 - - tornado=6.4=py311h459d7ec_0 - - tqdm=4.66.2=pyhd8ed1ab_0 - - traitlets=5.14.1=pyhd8ed1ab_0 + - toml=0.10.2=pyhd8ed1ab_1 + - tomli=2.2.1=pyhd8ed1ab_1 + - toolz=1.0.0=pyhd8ed1ab_1 + - torchdata=0.7.1=py311h34085b1_7 + - torchmetrics=1.5.2=pyhd8ed1ab_1 + - tornado=6.4.2=py311h9ecbd09_0 + - tqdm=4.67.1=pyhd8ed1ab_0 + - traitlets=5.14.3=pyhd8ed1ab_1 - treelib=1.7.0=pyhd8ed1ab_0 - - types-python-dateutil=2.8.19.20240106=pyhd8ed1ab_0 - 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xkeyboard-config=2.43=hb9d3cd8_0 + - xmltodict=0.14.2=pyhd8ed1ab_1 + - xorg-libice=1.1.2=hb9d3cd8_0 + - xorg-libsm=1.2.5=he73a12e_0 + - xorg-libx11=1.8.10=h4f16b4b_1 + - xorg-libxau=1.0.12=hb9d3cd8_0 + - xorg-libxdmcp=1.1.5=hb9d3cd8_0 + - xorg-libxext=1.3.6=hb9d3cd8_0 + - xorg-libxrender=0.9.12=hb9d3cd8_0 + - xorg-libxt=1.3.1=hb9d3cd8_0 + - xz=5.6.3=hbcc6ac9_1 + - xz-gpl-tools=5.6.3=hbcc6ac9_1 + - xz-tools=5.6.3=hb9d3cd8_1 - yaml=0.2.5=h7f98852_2 - - yarl=1.9.4=py311h459d7ec_0 - - zeromq=4.3.5=h59595ed_1 - - zict=3.0.0=pyhd8ed1ab_0 - - zipp=3.17.0=pyhd8ed1ab_0 - - zlib=1.2.13=hd590300_5 - - zlib-ng=2.0.7=h0b41bf4_0 - - zstd=1.5.5=hfc55251_0 + - zeromq=4.3.5=h3b0a872_7 + - zict=3.0.0=pyhd8ed1ab_1 + - zipp=3.21.0=pyhd8ed1ab_1 + - zlib=1.3.1=hb9d3cd8_2 + - zlib-ng=2.2.2=h5888daf_0 + - zstandard=0.23.0=py311hbc35293_1 + - zstd=1.5.6=ha6fb4c9_0 - pip: - amberutils==21.0 - - dgl==1.1.3 + - cftime==1.6.4.post1 - edgembar==0.2 - espaloma-charge==0.0.8 - mmpbsa-py==16.0 - - nvidia-cublas-cu12==12.1.3.1 - - nvidia-cuda-cupti-cu12==12.1.105 - - nvidia-cuda-nvrtc-cu12==12.1.105 - - nvidia-cuda-runtime-cu12==12.1.105 - - nvidia-cudnn-cu12==8.9.2.26 - - nvidia-cufft-cu12==11.0.2.54 - - nvidia-curand-cu12==10.3.2.106 - - nvidia-cusolver-cu12==11.4.5.107 - - nvidia-cusparse-cu12==12.1.0.106 - - nvidia-nccl-cu12==2.19.3 - - nvidia-nvjitlink-cu12==12.3.101 - - nvidia-nvtx-cu12==12.1.105 + - netcdf4==1.7.2 - packmol-memgen==2023.2.24 - pdb4amber==22.0 - pymsmt==22.0 - pytraj==2.0.6 - - sander==22.0 - - torch==2.2.1 - - triton==2.2.0 \ No newline at end of file + - sander==22.0 \ No newline at end of file