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Handle rows with variance = 0 #1

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timdiels opened this issue Oct 25, 2020 · 0 comments

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timdiels commented Oct 25, 2020

In GitLab by @timdiels on Feb 20, 2020, 18:57

We need to handle rows without variance as we did in coexpnetviz before trying to calculate the correlation https://gitlab.psb.ugent.be/deep_genome/coexpnetviz/blob/master/coexpnetviz/_algorithm.py#L149

In CoExpNetViz we simply dropped such rows, I wonder how morph handles missing genes in expression matrices as this results in missing genes.

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