examples.md

Examples for Supported Interface

The following snippets show the support of PODIO for the different use cases as well as some potential pitfalls. These examples are mainly concerned with how collections of objects and the objects themselves interact. As such they are framework agnostic.

Object Ownership

Every data created is either explicitly owned by collections or automatically garbage-collected. There is no need for any new or delete call on user side. As a general rule: If an object has been added to a collection, the collection assumes ownership and if the collection goes out of scope all handles that point to objects in this collection are invalidated as well.

Object Creation and Storage

Objects and collections can be created via factories, which ensure proper object ownership:

    auto hits = HitCollection{};
    auto hit1 = hits.create(1.4,2.4,3.7,4.2);  // init with values
    auto hit2 = hits.create(); // default-construct object
    hit2.energy(42.23);

In addition, individual objects can be created in the free. If they aren't attached to a collection, they are automatically garbage-collected:

    auto hit1 = Hit();
    auto hit2 = Hit();
    ...
    hits.push_back(hit1);
    ...
    <automatic deletion of hit2>

In this respect all objects behave like objects in Python.

Object References

The library supports the creation of one-to-many relations:

    auto hits = HitCollection{};
    auto hit1 = hits.create();
    auto hit2 = hits.create();
    auto clusters = ClusterCollection{};
    auto cluster = clusters.create();
    cluster.addHit(hit1);
    cluster.addHit(hit2);

The references can be accessed via iterators on the referencing objects

    for (auto i = cluster.Hits_begin(), \
         end = cluster.Hits_end(); i!=end; ++i){
      std::cout << i->energy() << std::endl;
    }

or via direct accessors

    auto size = cluster.Hits_size();
    auto hit  = cluster.Hits(<aNumber>);

If asking for an entry outside bounds, a std::out_of_range exception is thrown.

Looping through Collections

Looping through collections is supported in two ways. Via iterators:

    for(auto i = hits.begin(), end = hits.end(); i != end; ++i) {
      std::cout << i->energy() << std::endl;
    }

and via direct object access:

    for(int i = 0, end = hits.size(), i != end, ++i){
      std::cout << hit[i].energy() << std::endl;
    }

Cloneing objects

In order to clone objects it is necessary to use the clone method which returns a Mutable object again. clone takes a parameter cloneRelations which is defaulted to true. By default the relation information of the original object is simply copied over, changing this to false only copies the data but none of the relations.

Support for Notebook-Pattern

The notebook pattern uses the assumption that it is better to create a small copy of only the data that are needed for a particular calculation. This pattern is supported by providing access like

    auto x_array = hits.x();   // returning all values
    auto y_array = hits.y(10); // or only the first 10 elements

The resulting std::vector can then be used in (auto-)vectorizable code. Passing in a size argument is optional; If no argument is passed all elements will be returned, if an argument is passed only as many elements as requested will be returned. If the collection holds less elements than are requested, only as elements as are available will be returned.

podio::Frame container

The podio::Frame is the main container for containing and grouping collections together. It has two main methods:

    /// Store a collection
    template<typename T>
    const T& put(T&& coll, const std::string& name);

    /// access a collection
    template<typename T>
    const& T get(const std::string& name);

Note that for putting collections into the Frame an explicit std::move is necessary to highlight the change of ownership that happens in this case.

Object Retrieval

Collections can be retrieved explicitly:

    auto& hits = frame.get<HitCollection>("hits");
    if (hits.isValid()) { ... }

Or implicitly when following an object reference. In both cases the access to data that has been retrieved is const.

User defined Meta Data

Sometimes it is necessary or useful to store additional data that is not directly foreseen in the EDM. This could be configuration parameters of simulation jobs, or parameter descriptions like cell-ID encoding etc. PODIO currently allows to store such meta data in terms of a GenericParameters class that holds an arbitrary number of named parameters of type int, float, string or vectors if these. Meta data can be stored and retrieved from the Frame via the templated putParameter and getParameter methods.

Python Interface

The Reader and Writer classes in the root_io and sio_io submodules provide all the necessary functionality to read and write event files. An example of reading files looks like this:

    from podio.root_io import Reader
    reader = Reader("one or many input files")
    for event in reader.get("events"):
      hits = store.get("hits")
      for hit in hits:
        # ...