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We can now view population frequencies of a mutation by clicking on a data point in the main mutations view. For this, we're computing a numpy array of shape num_nodes x num_populations. With large number of populations (e.g. >200 in the Unified Genealogies dataset) this array grows extremely big and tsqc runs out of memory, getting killed. We should make frequency plots optional, which users can choose to switch on only when sufficient memory is available.
The text was updated successfully, but these errors were encountered:
We can now view population frequencies of a mutation by clicking on a data point in the main mutations view. For this, we're computing a numpy array of shape num_nodes x num_populations. With large number of populations (e.g. >200 in the Unified Genealogies dataset) this array grows extremely big and tsqc runs out of memory, getting killed. We should make frequency plots optional, which users can choose to switch on only when sufficient memory is available.
The text was updated successfully, but these errors were encountered: