From 667b6be0fefe4dc084778ac47b89bfc8d5e323ca Mon Sep 17 00:00:00 2001 From: Aleksey Malakhov <131314005+alekseymalakhov11@users.noreply.github.com> Date: Tue, 30 Jul 2024 19:15:13 +0300 Subject: [PATCH 01/20] Create tests.yml --- .github/workflows/tests.yml | 46 +++++++++++++++++++++++++++++++++++++ 1 file changed, 46 insertions(+) create mode 100644 .github/workflows/tests.yml diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml new file mode 100644 index 0000000..48138ae --- /dev/null +++ b/.github/workflows/tests.yml @@ -0,0 +1,46 @@ +name: Push +on: [push] + +jobs: + test: + strategy: + fail-fast: false + matrix: + python-version: ['3.10'] + poetry-version: ['1.2.2'] + os: [ubuntu-latest] + runs-on: ${{ matrix.os }} + steps: + - uses: actions/checkout@v3 + - uses: actions/setup-python@v3 + with: + python-version: ${{ matrix.python-version }} + - name: Run image + uses: abatilo/actions-poetry@v2.1.4 + with: + poetry-version: ${{ matrix.poetry-version }} + - name: Install dependencies + run: poetry install + - name: Run tests + run: poetry run make tests + code-quality: + strategy: + fail-fast: false + matrix: + python-version: ['3.10'] + poetry-version: ['1.2.2'] + os: [ubuntu-latest] + runs-on: ${{ matrix.os }} + steps: + - uses: actions/checkout@v3 + - uses: actions/setup-python@v3 + with: + python-version: ${{ matrix.python-version }} + - name: Run image + uses: abatilo/actions-poetry@v2.1.4 + with: + poetry-version: ${{ matrix.poetry-version }} + - name: Install dependencies + run: poetry install + - name: Run linters + run: poetry run make lint From aa9eed4f7512933247cbdbf046cae6a39aa1cf01 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Tue, 30 Jul 2024 16:17:07 +0000 Subject: [PATCH 02/20] rename stages --- .github/workflows/tests.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 48138ae..f89ce5c 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -2,7 +2,7 @@ name: Push on: [push] jobs: - test: + tests: strategy: fail-fast: false matrix: @@ -23,7 +23,7 @@ jobs: run: poetry install - name: Run tests run: poetry run make tests - code-quality: + linters: strategy: fail-fast: false matrix: From 57e42a784bb0248a9af88c253d1250704bcebc82 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Tue, 30 Jul 2024 17:35:28 +0000 Subject: [PATCH 03/20] remove gpu, deepspeed --- .github/workflows/tests.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index f89ce5c..f3ee488 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -20,7 +20,7 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install + run: poetry install --without gpu,deepspeed - name: Run tests run: poetry run make tests linters: @@ -41,6 +41,6 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install + run: poetry install --without gpu,deepspeed - name: Run linters run: poetry run make lint From 140ada74d12d45ba3b55750a175a3ec8fc7facc5 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Sat, 24 Aug 2024 13:50:31 +0000 Subject: [PATCH 04/20] add poetry lock --- .gitignore | 1 - poetry.lock | 7391 +++++++++++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 7391 insertions(+), 1 deletion(-) create mode 100644 poetry.lock diff --git a/.gitignore b/.gitignore index cb90d84..d588466 100755 --- a/.gitignore +++ b/.gitignore @@ -99,7 +99,6 @@ ENV/ env.bak/ venv.bak/ default_tb/ -poetry.lock # Spyder project settings .spyderproject diff --git a/poetry.lock b/poetry.lock new file mode 100644 index 0000000..20db1a7 --- /dev/null +++ b/poetry.lock @@ -0,0 +1,7391 @@ +[[package]] +name = "absl-py" +version = "2.1.0" +description = "Abseil Python Common Libraries, see https://github.com/abseil/abseil-py." +category = "main" +optional = false +python-versions = ">=3.7" + +[[package]] +name = "accelerate" +version = "0.27.0" +description = "Accelerate" +category = "main" +optional = false +python-versions = ">=3.8.0" + +[package.dependencies] +huggingface-hub = "*" +numpy = ">=1.17" +packaging = ">=20.0" +psutil = "*" +pyyaml = "*" +safetensors = ">=0.3.1" +torch = ">=1.10.0" + +[package.extras] +dev = ["bitsandbytes", "black (>=23.1,<24.0)", "datasets", "deepspeed (<0.13.0)", "evaluate", "hf-doc-builder (>=0.3.0)", "parameterized", "pytest", "pytest-subtests", "pytest-xdist", "rich", "ruff (>=0.1.15,<0.2.0)", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +quality = ["black (>=23.1,<24.0)", "hf-doc-builder (>=0.3.0)", "ruff (>=0.1.15,<0.2.0)"] +rich = ["rich"] +sagemaker = ["sagemaker"] +test-dev = ["bitsandbytes", "datasets", "deepspeed (<0.13.0)", "evaluate", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +test-prod = ["parameterized", "pytest", "pytest-subtests", "pytest-xdist"] +test-trackers = ["comet-ml", "dvclive", "tensorboard", "wandb"] +testing = ["bitsandbytes", "datasets", "deepspeed (<0.13.0)", "evaluate", "parameterized", "pytest", "pytest-subtests", "pytest-xdist", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] + +[[package]] +name = "aiohappyeyeballs" +version = "2.3.7" +description = "Happy Eyeballs for asyncio" +category = "main" +optional = false +python-versions = ">=3.8" + +[[package]] +name = "aiohttp" +version = "3.10.4" +description = "Async http client/server framework (asyncio)" +category = "main" +optional = false +python-versions = ">=3.8" + +[package.dependencies] +aiohappyeyeballs = ">=2.3.0" +aiosignal = ">=1.1.2" +async-timeout = {version = ">=4.0,<5.0", markers = "python_version < \"3.11\""} +attrs = ">=17.3.0" +frozenlist = ">=1.1.1" +multidict = ">=4.5,<7.0" +yarl = ">=1.0,<2.0" + +[package.extras] +speedups = ["Brotli", "aiodns (>=3.2.0)", "brotlicffi"] + +[[package]] +name = "aiosignal" +version = "1.3.1" +description = "aiosignal: a list of registered asynchronous callbacks" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +frozenlist = ">=1.1.0" + +[[package]] +name = "albucore" +version = "0.0.13" +description = "A high-performance image processing library designed to optimize and extend the Albumentations library with specialized functions for advanced image transformations. Perfect for developers working in computer vision who require efficient and scalable image augmentation." +category = "main" +optional = false +python-versions = ">=3.8" + +[package.dependencies] +numpy = ">=1.24.4,<2" +opencv-python-headless = ">=4.9.0.80" +tomli = ">=2.0.1" +typing-extensions = ">=4.9.0" + +[[package]] +name = "albumentations" +version = "1.4.14" +description = "An efficient library for image augmentation, providing extensive transformations to support machine learning and computer vision tasks." +category = "main" +optional = false +python-versions = ">=3.8" + +[package.dependencies] +albucore = ">=0.0.13" +eval-type-backport = "*" +numpy = ">=1.24.4" +opencv-python-headless = ">=4.9.0.80" +pydantic = ">=2.7.0" +PyYAML = "*" +scikit-image = ">=0.21.0" +scipy = ">=1.10.0" +typing-extensions = ">=4.9.0" + +[package.extras] +hub = ["huggingface-hub"] +text = ["pillow"] + +[[package]] +name = "allenai-common" +version = "1.1.2" +description = "Params, FromParams, Registrable, Lazy classes from AllenNLP" +category = "main" +optional = false +python-versions = ">=3.6,<4.0" + +[package.dependencies] +boto3 = ">=1.14.0,<2.0.0" +filelock = ">=3.0.0,<4.0.0" +overrides = "3.1.0" +requests = ">=2.18.0,<3.0.0" +tqdm = ">=4.19.0,<5.0.0" + +[[package]] +name = "annotated-types" +version = "0.6.0" +description = "Reusable constraint types to use with typing.Annotated" +category = "main" +optional = false +python-versions = ">=3.8" + +[[package]] +name = "anybadge" +version = "1.14.0" +description = "Simple, flexible badge generator for project badges." +category = "dev" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +packaging = "*" + +[[package]] +name = "anyio" +version = "4.4.0" +description = "High level compatibility layer for multiple asynchronous event loop implementations" +category = "main" +optional = false +python-versions = ">=3.8" + +[package.dependencies] +exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""} +idna = ">=2.8" +sniffio = ">=1.1" +typing-extensions = {version = ">=4.1", markers = "python_version < \"3.11\""} + +[package.extras] +doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"] +test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"] +trio = ["trio (>=0.23)"] + +[[package]] +name = "appdirs" +version = "1.4.4" +description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." +category = "main" +optional = false +python-versions = "*" + +[[package]] +name = "appnope" +version = "0.1.4" +description = "Disable App Nap on macOS >= 10.9" +category = "main" +optional = false +python-versions = ">=3.6" + +[[package]] +name = "argon2-cffi" +version = "23.1.0" +description = "Argon2 for Python" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +argon2-cffi-bindings = "*" + +[package.extras] +dev = ["argon2-cffi[tests,typing]", "tox (>4)"] +docs = ["furo", "myst-parser", "sphinx", "sphinx-copybutton", "sphinx-notfound-page"] +tests = ["hypothesis", "pytest"] +typing = ["mypy"] + +[[package]] +name = "argon2-cffi-bindings" +version = "21.2.0" +description = "Low-level CFFI bindings for Argon2" +category = "main" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +cffi = ">=1.0.1" + +[package.extras] +dev = ["cogapp", "pre-commit", "pytest", "wheel"] +tests = ["pytest"] + +[[package]] +name = "arrow" +version = "1.3.0" +description = "Better dates & times for Python" +category = "main" +optional = false +python-versions = ">=3.8" + +[package.dependencies] +python-dateutil = ">=2.7.0" +types-python-dateutil = ">=2.8.10" + +[package.extras] +doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"] +test 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=?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Sat, 24 Aug 2024 14:03:11 +0000 Subject: [PATCH 05/20] update tests --- .github/workflows/tests.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index f3ee488..5caf2fe 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -20,7 +20,7 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install --without gpu,deepspeed + run: poetry install --without deepspeed - name: Run tests run: poetry run make tests linters: @@ -41,6 +41,6 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install --without gpu,deepspeed + run: poetry install --without deepspeed - name: Run linters run: poetry run make lint From 9092e4ef911988c9ffbae7afaecc6477657d2402 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Sat, 24 Aug 2024 14:15:27 +0000 Subject: [PATCH 06/20] update makefile --- Makefile | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) diff --git a/Makefile b/Makefile index 94724e2..b8d8e79 100644 --- a/Makefile +++ b/Makefile @@ -27,7 +27,7 @@ flake: flake8 --max-line-length 119 --jobs $(JOBS) --statistics $${CI:+--format=gl-codeclimate --output=codeclimate-flake8.json} $(CODE) pylint: - pylint --jobs $(JOBS) --rcfile=setup.cfg $${CI:+--output-format=pylint_gitlab.GitlabCodeClimateReporter --output=codeclimate-pylint.json} $(CODE) + pylint --jobs $(JOBS) --rcfile=setup.cfg $${CI:+--output-format=json --output=codeclimate-pylint.json} $(CODE) mypy: mypy --config-file mypy.ini $(CODE) --show-traceback @@ -39,9 +39,6 @@ ifneq ($(CODE),) unify --in-place --recursive $(CODE) tutorials endif -bash-dev: - docker run -v $(shell pwd):/app --rm -it ${DEV_IMAGE} bash - lock: rm poetry.lock poetry lock From 0c9b446b27aa891875f226fb283a4fa2ae0ef5fb Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Sat, 24 Aug 2024 14:22:47 +0000 Subject: [PATCH 07/20] remove pylint --- Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Makefile b/Makefile index b8d8e79..dd04104 100644 --- a/Makefile +++ b/Makefile @@ -18,7 +18,7 @@ tests: tests-unit tests-integration tests-cli [ -n $$CI ] && coverage xml -i || true # always success coverage report -i -lint: black flake pylint mypy +lint: black flake mypy black: black --target-version py310 --check --skip-string-normalization --line-length $(MAX_LINE_LENGTH) $(CODE) From ac4948e6a2405103267030c7e96645166279cea1 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 08:25:12 +0000 Subject: [PATCH 08/20] fix tests --- turbo_alignment/generators/chat.py | 4 ++-- turbo_alignment/generators/multimodal.py | 2 +- turbo_alignment/generators/rag.py | 2 +- turbo_alignment/modeling/rag/rag_model.py | 2 +- 4 files changed, 5 insertions(+), 5 deletions(-) diff --git a/turbo_alignment/generators/chat.py b/turbo_alignment/generators/chat.py index acc4337..ba5f1a5 100755 --- a/turbo_alignment/generators/chat.py +++ b/turbo_alignment/generators/chat.py @@ -39,7 +39,7 @@ def _generate_from_batch_records( inputs=batched_input_ids, attention_mask=batched_attention_mask, generation_config=self._transformers_generator_parameters, - tokenizer=self._tokenizer, + # tokenizer=self._tokenizer, pad_token_id=self._tokenizer.pad_token_id, ) @@ -84,7 +84,7 @@ def _generate_from_single_record( inputs=input_ids, attention_mask=attention_mask, generation_config=self._transformers_generator_parameters, - tokenizer=self._tokenizer, + # tokenizer=self._tokenizer, pad_token_id=self._tokenizer.pad_token_id, ) diff --git a/turbo_alignment/generators/multimodal.py b/turbo_alignment/generators/multimodal.py index 0c64137..2c0708c 100755 --- a/turbo_alignment/generators/multimodal.py +++ b/turbo_alignment/generators/multimodal.py @@ -50,7 +50,7 @@ def _generate_from_single_record( output_indices = self._model.language_model.generate( inputs_embeds=inputs_embeds, attention_mask=attention_mask, - tokenizer=self._tokenizer, + # tokenizer=self._tokenizer, generation_config=self._transformers_generator_parameters, ) diff --git a/turbo_alignment/generators/rag.py b/turbo_alignment/generators/rag.py index 4203de8..2af3e84 100755 --- a/turbo_alignment/generators/rag.py +++ b/turbo_alignment/generators/rag.py @@ -22,7 +22,7 @@ def _generate_from_single_record( answer_indices, document_indices, doc_scores = self._model.generate( inputs=input_ids, generation_config=self._transformers_generator_parameters, - tokenizer=self._tokenizer.current_tokenizer, + # tokenizer=self._tokenizer.current_tokenizer, pad_token_id=self._tokenizer.pad_token_id, ) diff --git a/turbo_alignment/modeling/rag/rag_model.py b/turbo_alignment/modeling/rag/rag_model.py index 9bd926b..71b98d9 100755 --- a/turbo_alignment/modeling/rag/rag_model.py +++ b/turbo_alignment/modeling/rag/rag_model.py @@ -343,7 +343,7 @@ def generate( input_ids=joined_input_ids, generation_config=generation_config, pad_token_id=self.tokenizer.pad_token_id, - tokenizer=kwargs.get('tokenizer', None), + # tokenizer=kwargs.get('tokenizer', None), ) # TODO chose max-prob sequence with accounting for doc probs only_answer_output = output_sequences[:, joined_input_ids.shape[-1] :] From c140cbe77a96dbb4c8e04c142ecb11c629601abf Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 08:43:25 +0000 Subject: [PATCH 09/20] fix tests and remove multimodal inference --- tests/cli/test_multimodal_inference.py | 42 +++++++++++------------ turbo_alignment/generators/chat.py | 4 +-- turbo_alignment/generators/multimodal.py | 2 +- turbo_alignment/generators/rag.py | 2 +- turbo_alignment/modeling/rag/rag_model.py | 2 +- 5 files changed, 26 insertions(+), 26 deletions(-) diff --git a/tests/cli/test_multimodal_inference.py b/tests/cli/test_multimodal_inference.py index 60c9a05..91d1b0e 100644 --- a/tests/cli/test_multimodal_inference.py +++ b/tests/cli/test_multimodal_inference.py @@ -1,26 +1,26 @@ -from pathlib import Path +# from pathlib import Path -import pytest -from typer.testing import CliRunner +# import pytest +# from typer.testing import CliRunner -from tests.constants import FIXTURES_PATH -from turbo_alignment.cli import app -from turbo_alignment.settings.pipelines.inference.multimodal import ( - MultimodalInferenceExperimentSettings, -) +# from tests.constants import FIXTURES_PATH +# from turbo_alignment.cli import app +# from turbo_alignment.settings.pipelines.inference.multimodal import ( +# MultimodalInferenceExperimentSettings, +# ) -runner = CliRunner() +# runner = CliRunner() -@pytest.mark.parametrize( - 'config_path', - [ - FIXTURES_PATH / 'configs/inference/multimodal/llama_llava_clip_pickle.json', - ], -) -def test_multimodal_inference_mlp_with_preprocessing(config_path: Path): - result = runner.invoke( - app, ['inference_multimodal', '--inference_settings_path', str(config_path)], catch_exceptions=False - ) - assert result.exit_code == 0 - assert MultimodalInferenceExperimentSettings.parse_file(config_path).save_path.is_dir() +# @pytest.mark.parametrize( +# 'config_path', +# [ +# FIXTURES_PATH / 'configs/inference/multimodal/llama_llava_clip_pickle.json', +# ], +# ) +# def test_multimodal_inference_mlp_with_preprocessing(config_path: Path): +# result = runner.invoke( +# app, ['inference_multimodal', '--inference_settings_path', str(config_path)], catch_exceptions=False +# ) +# assert result.exit_code == 0 +# assert MultimodalInferenceExperimentSettings.parse_file(config_path).save_path.is_dir() diff --git a/turbo_alignment/generators/chat.py b/turbo_alignment/generators/chat.py index ba5f1a5..acc4337 100755 --- a/turbo_alignment/generators/chat.py +++ b/turbo_alignment/generators/chat.py @@ -39,7 +39,7 @@ def _generate_from_batch_records( inputs=batched_input_ids, attention_mask=batched_attention_mask, generation_config=self._transformers_generator_parameters, - # tokenizer=self._tokenizer, + tokenizer=self._tokenizer, pad_token_id=self._tokenizer.pad_token_id, ) @@ -84,7 +84,7 @@ def _generate_from_single_record( inputs=input_ids, attention_mask=attention_mask, generation_config=self._transformers_generator_parameters, - # tokenizer=self._tokenizer, + tokenizer=self._tokenizer, pad_token_id=self._tokenizer.pad_token_id, ) diff --git a/turbo_alignment/generators/multimodal.py b/turbo_alignment/generators/multimodal.py index 2c0708c..0c64137 100755 --- a/turbo_alignment/generators/multimodal.py +++ b/turbo_alignment/generators/multimodal.py @@ -50,7 +50,7 @@ def _generate_from_single_record( output_indices = self._model.language_model.generate( inputs_embeds=inputs_embeds, attention_mask=attention_mask, - # tokenizer=self._tokenizer, + tokenizer=self._tokenizer, generation_config=self._transformers_generator_parameters, ) diff --git a/turbo_alignment/generators/rag.py b/turbo_alignment/generators/rag.py index 2af3e84..4203de8 100755 --- a/turbo_alignment/generators/rag.py +++ b/turbo_alignment/generators/rag.py @@ -22,7 +22,7 @@ def _generate_from_single_record( answer_indices, document_indices, doc_scores = self._model.generate( inputs=input_ids, generation_config=self._transformers_generator_parameters, - # tokenizer=self._tokenizer.current_tokenizer, + tokenizer=self._tokenizer.current_tokenizer, pad_token_id=self._tokenizer.pad_token_id, ) diff --git a/turbo_alignment/modeling/rag/rag_model.py b/turbo_alignment/modeling/rag/rag_model.py index 71b98d9..9bd926b 100755 --- a/turbo_alignment/modeling/rag/rag_model.py +++ b/turbo_alignment/modeling/rag/rag_model.py @@ -343,7 +343,7 @@ def generate( input_ids=joined_input_ids, generation_config=generation_config, pad_token_id=self.tokenizer.pad_token_id, - # tokenizer=kwargs.get('tokenizer', None), + tokenizer=kwargs.get('tokenizer', None), ) # TODO chose max-prob sequence with accounting for doc probs only_answer_output = output_sequences[:, joined_input_ids.shape[-1] :] From a227e3c7ff828e4a6c5f62b937ca6a3f3ba6bf7b Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 08:56:19 +0000 Subject: [PATCH 10/20] add pylint --- Makefile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Makefile b/Makefile index dd04104..fcbd913 100644 --- a/Makefile +++ b/Makefile @@ -18,7 +18,7 @@ tests: tests-unit tests-integration tests-cli [ -n $$CI ] && coverage xml -i || true # always success coverage report -i -lint: black flake mypy +lint: black flake pylint mypy black: black --target-version py310 --check --skip-string-normalization --line-length $(MAX_LINE_LENGTH) $(CODE) @@ -27,7 +27,7 @@ flake: flake8 --max-line-length 119 --jobs $(JOBS) --statistics $${CI:+--format=gl-codeclimate --output=codeclimate-flake8.json} $(CODE) pylint: - pylint --jobs $(JOBS) --rcfile=setup.cfg $${CI:+--output-format=json --output=codeclimate-pylint.json} $(CODE) + pylint --rcfile=setup.cfg $${CI:+--output-format=json --output=codeclimate-pylint.json} $(CODE) mypy: mypy --config-file mypy.ini $(CODE) --show-traceback From 31af4024bc46dc84a2fbca34f38f9f1595796a9e Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 09:03:30 +0000 Subject: [PATCH 11/20] update makefile --- Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Makefile b/Makefile index fcbd913..a40a65c 100644 --- a/Makefile +++ b/Makefile @@ -27,7 +27,7 @@ flake: flake8 --max-line-length 119 --jobs $(JOBS) --statistics $${CI:+--format=gl-codeclimate --output=codeclimate-flake8.json} $(CODE) pylint: - pylint --rcfile=setup.cfg $${CI:+--output-format=json --output=codeclimate-pylint.json} $(CODE) + pylint $(CODE) mypy: mypy --config-file mypy.ini $(CODE) --show-traceback From 3218662ab85ae6febdd126303aa0e4aa48abf398 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 09:14:44 +0000 Subject: [PATCH 12/20] update pylint --- Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Makefile b/Makefile index a40a65c..55420d1 100644 --- a/Makefile +++ b/Makefile @@ -27,7 +27,7 @@ flake: flake8 --max-line-length 119 --jobs $(JOBS) --statistics $${CI:+--format=gl-codeclimate --output=codeclimate-flake8.json} $(CODE) pylint: - pylint $(CODE) + pylint --jobs $(JOBS) --rcfile=setup.cfg $(CODE) mypy: mypy --config-file mypy.ini $(CODE) --show-traceback From e1497bd31a18b3f3e99e9a5e29813d8c671dce7d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 09:23:10 +0000 Subject: [PATCH 13/20] update ci --- .github/workflows/tests.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 5caf2fe..f89ce5c 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -20,7 +20,7 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install --without deepspeed + run: poetry install - name: Run tests run: poetry run make tests linters: @@ -41,6 +41,6 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install --without deepspeed + run: poetry install - name: Run linters run: poetry run make lint From b0a5d5804e8502f2246c868e494185657f1b968f Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 09:32:11 +0000 Subject: [PATCH 14/20] add test for multimodal inference --- tests/cli/test_multimodal_inference.py | 42 +++++++++++++------------- 1 file changed, 21 insertions(+), 21 deletions(-) diff --git a/tests/cli/test_multimodal_inference.py b/tests/cli/test_multimodal_inference.py index 91d1b0e..60c9a05 100644 --- a/tests/cli/test_multimodal_inference.py +++ b/tests/cli/test_multimodal_inference.py @@ -1,26 +1,26 @@ -# from pathlib import Path +from pathlib import Path -# import pytest -# from typer.testing import CliRunner +import pytest +from typer.testing import CliRunner -# from tests.constants import FIXTURES_PATH -# from turbo_alignment.cli import app -# from turbo_alignment.settings.pipelines.inference.multimodal import ( -# MultimodalInferenceExperimentSettings, -# ) +from tests.constants import FIXTURES_PATH +from turbo_alignment.cli import app +from turbo_alignment.settings.pipelines.inference.multimodal import ( + MultimodalInferenceExperimentSettings, +) -# runner = CliRunner() +runner = CliRunner() -# @pytest.mark.parametrize( -# 'config_path', -# [ -# FIXTURES_PATH / 'configs/inference/multimodal/llama_llava_clip_pickle.json', -# ], -# ) -# def test_multimodal_inference_mlp_with_preprocessing(config_path: Path): -# result = runner.invoke( -# app, ['inference_multimodal', '--inference_settings_path', str(config_path)], catch_exceptions=False -# ) -# assert result.exit_code == 0 -# assert MultimodalInferenceExperimentSettings.parse_file(config_path).save_path.is_dir() +@pytest.mark.parametrize( + 'config_path', + [ + FIXTURES_PATH / 'configs/inference/multimodal/llama_llava_clip_pickle.json', + ], +) +def test_multimodal_inference_mlp_with_preprocessing(config_path: Path): + result = runner.invoke( + app, ['inference_multimodal', '--inference_settings_path', str(config_path)], catch_exceptions=False + ) + assert result.exit_code == 0 + assert MultimodalInferenceExperimentSettings.parse_file(config_path).save_path.is_dir() From 12a654af5ec050edfbe0a414984883ddb1db130e Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 09:49:58 +0000 Subject: [PATCH 15/20] add projections adapters --- .gitignore | 1 + .../projections/modality_adapters.pt | Bin 0 -> 14816 bytes 2 files changed, 1 insertion(+) create mode 100644 tests/fixtures/models/llama2_tiny_multimodal_clip_mlp/projections/modality_adapters.pt diff --git a/.gitignore b/.gitignore index d588466..b0ffaaf 100755 --- a/.gitignore +++ b/.gitignore @@ -53,6 +53,7 @@ coverage.xml *.cover .hypothesis/ .pytest_cache/ +!tests/fixtures/models/llama2_tiny_multimodal_clip_mlp/projections/modality_adapters.pt # Translations *.mo diff --git a/tests/fixtures/models/llama2_tiny_multimodal_clip_mlp/projections/modality_adapters.pt 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zR1eiO=@`}^X-+cM{LG1rH%aGD)+5!uZaRL_&)=UvZ$OQ|`25K~zb#bj^(z0}2T(%N zC+%SGq;LMAFZ~20{rvq7N(Yqwiyc(>?aMcvT6Aosud4mnBQNf&$kv#5%ljx z{`GatfBnDKZ&(Wms9x>mOZ2{^FGU9YQsd?CNnd@eS2tDCSJ(8d&9nhYuYdX4{{hi5 BD%=17 literal 0 HcmV?d00001 From 917ee07a1d6ac25297a1f9bde00263b288192695 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 15:49:46 +0000 Subject: [PATCH 16/20] add extras inssted of groups --- .github/workflows/tests.yml | 4 +- poetry.lock | 1836 ++++++++--------------------------- pyproject.toml | 23 +- 3 files changed, 413 insertions(+), 1450 deletions(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index f89ce5c..3123598 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -20,7 +20,7 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install + run: poetry install --all-extras - name: Run tests run: poetry run make tests linters: @@ -41,6 +41,6 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install + run: poetry install --all-extras - name: Run linters run: poetry run make lint diff --git a/poetry.lock b/poetry.lock index 20db1a7..cfd023f 100644 --- a/poetry.lock +++ b/poetry.lock @@ -8,15 +8,15 @@ python-versions = ">=3.7" [[package]] name = "accelerate" -version = "0.27.0" +version = "0.33.0" description = "Accelerate" category = "main" optional = false python-versions = ">=3.8.0" [package.dependencies] -huggingface-hub = "*" -numpy = ">=1.17" +huggingface-hub = ">=0.21.0" +numpy = ">=1.17,<2.0.0" packaging = ">=20.0" psutil = "*" pyyaml = "*" @@ -24,18 +24,19 @@ safetensors = ">=0.3.1" torch = ">=1.10.0" [package.extras] -dev = ["bitsandbytes", "black (>=23.1,<24.0)", "datasets", "deepspeed (<0.13.0)", "evaluate", "hf-doc-builder (>=0.3.0)", "parameterized", "pytest", "pytest-subtests", "pytest-xdist", "rich", "ruff (>=0.1.15,<0.2.0)", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] -quality = ["black (>=23.1,<24.0)", "hf-doc-builder (>=0.3.0)", "ruff (>=0.1.15,<0.2.0)"] +deepspeed = ["deepspeed (<=0.14.0)"] +dev = ["bitsandbytes", "black (>=23.1,<24.0)", "datasets", "diffusers", "evaluate", "hf-doc-builder (>=0.3.0)", "parameterized", "pytest (>=7.2.0,<=8.0.0)", "pytest-subtests", "pytest-xdist", "rich", "ruff (>=0.2.1,<0.3.0)", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +quality = ["black (>=23.1,<24.0)", "hf-doc-builder (>=0.3.0)", "ruff (>=0.2.1,<0.3.0)"] rich = ["rich"] sagemaker = ["sagemaker"] -test-dev = ["bitsandbytes", "datasets", "deepspeed (<0.13.0)", "evaluate", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] -test-prod = ["parameterized", "pytest", "pytest-subtests", "pytest-xdist"] +test-dev = ["bitsandbytes", "datasets", "diffusers", "evaluate", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +test-prod = ["parameterized", "pytest (>=7.2.0,<=8.0.0)", "pytest-subtests", "pytest-xdist"] test-trackers = ["comet-ml", "dvclive", "tensorboard", "wandb"] -testing = ["bitsandbytes", "datasets", "deepspeed (<0.13.0)", "evaluate", "parameterized", "pytest", "pytest-subtests", "pytest-xdist", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +testing = ["bitsandbytes", "datasets", "diffusers", "evaluate", "parameterized", "pytest (>=7.2.0,<=8.0.0)", "pytest-subtests", "pytest-xdist", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] [[package]] name = "aiohappyeyeballs" -version = "2.3.7" +version = "2.4.0" description = "Happy Eyeballs for asyncio" category = "main" optional = false @@ -43,7 +44,7 @@ python-versions = ">=3.8" [[package]] name = "aiohttp" -version = "3.10.4" +version = "3.10.5" description = "Async http client/server framework (asyncio)" category = "main" optional = false @@ -377,14 +378,14 @@ css = ["tinycss2 (>=1.1.0,<1.3)"] [[package]] name = "boto3" -version = "1.35.0" +version = "1.35.5" description = "The AWS SDK for Python" category = "main" optional = false python-versions = ">=3.8" [package.dependencies] -botocore = ">=1.35.0,<1.36.0" +botocore = ">=1.35.5,<1.36.0" jmespath = ">=0.7.1,<2.0.0" s3transfer = ">=0.10.0,<0.11.0" @@ -393,7 +394,7 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"] [[package]] name = "botocore" -version = "1.35.0" +version = "1.35.5" description = "Low-level, data-driven core of boto 3." category = "main" optional = false @@ -445,25 +446,6 @@ python-versions = ">=3.7" [package.dependencies] colorama = {version = "*", markers = "platform_system == \"Windows\""} -[[package]] -name = "cloudpickle" -version = "3.0.0" -description = "Pickler class to extend the standard pickle.Pickler functionality" -category = "dev" -optional = false -python-versions = ">=3.8" - -[[package]] -name = "cmake" -version = "3.30.2" -description = "CMake is an open-source, cross-platform family of tools designed to build, test and package software" -category = "dev" -optional = false -python-versions = ">=3.7" - -[package.extras] -test = ["coverage (>=4.2)", "pytest (>=3.0.3)", "pytest-cov (>=2.4.0)"] - [[package]] name = "colorama" version = "0.4.6" @@ -554,39 +536,6 @@ category = "main" optional = false python-versions = ">=3.5" -[[package]] -name = "deepspeed" -version = "0.12.0" -description = "DeepSpeed library" -category = "dev" -optional = false -python-versions = "*" - -[package.dependencies] -hjson = "*" -ninja = "*" -numpy = "*" -packaging = ">=20.0" -psutil = "*" -py-cpuinfo = "*" -pydantic = "*" -pynvml = "*" -torch = "*" -tqdm = "*" - -[package.extras] -1bit-mpi = ["mpi4py"] -all = ["accelerate", "autodoc_pydantic", "clang-format (==16.0.2)", "coverage", "deepspeed-kernels", "diffusers", "docutils (<0.18)", "future", "google", "hjson", "importlib-metadata (>=4)", "lm-eval (==0.3.0)", "mpi4py", "mup", "neural-compressor (==2.1.0)", "packaging", "pre-commit (>=2.20.0)", "protobuf", "psutil", "py-cpuinfo", "pydantic (<2.0.0)", "pytest", "pytest-forked", "pytest-randomly", "pytest-xdist", "recommonmark", "sphinx", "sphinx-rtd-theme", "sphinx_rtd_theme", "tabulate", "tensorboard", "torch", "torchvision", "tqdm", "transformers", "transformers[sentencepiece]", "triton (==1.0.0)", "triton (==2.0.0.dev20221202)", "triton (>=2.1.0)", "wandb", "xgboost"] -autotuning = ["tabulate"] -autotuning-ml = ["hjson", "tabulate", "xgboost"] -dev = ["accelerate", "clang-format (==16.0.2)", "coverage", "deepspeed-kernels", "docutils (<0.18)", "future", "importlib-metadata (>=4)", "mup", "pre-commit (>=2.20.0)", "pytest", "pytest-forked", "pytest-randomly", "pytest-xdist", "recommonmark", "sphinx", "sphinx-rtd-theme", "tensorboard", "torchvision", "transformers", "wandb"] -inf = ["google", "lm-eval (==0.3.0)", "protobuf", "transformers", "transformers[sentencepiece]"] -readthedocs = ["autodoc_pydantic", "docutils (<0.18)", "hjson", "packaging", "psutil", "py-cpuinfo", "pydantic (<2.0.0)", "recommonmark", "sphinx_rtd_theme", "torch", "tqdm"] -sd = ["diffusers", "triton (==2.0.0.dev20221202)"] -sparse = ["neural-compressor (==2.1.0)"] -sparse-attn = ["triton (==1.0.0)"] -triton = ["triton (>=2.1.0)"] - [[package]] name = "defusedxml" version = "0.7.1" @@ -607,14 +556,6 @@ python-versions = ">=3.8" graph = ["objgraph (>=1.7.2)"] profile = ["gprof2dot (>=2022.7.29)"] -[[package]] -name = "diskcache" -version = "5.6.3" -description = "Disk Cache -- Disk and file backed persistent cache." -category = "dev" -optional = false -python-versions = ">=3" - [[package]] name = "docker-pycreds" version = "0.4.0" @@ -699,31 +640,6 @@ python-versions = ">=3.5" [package.extras] tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipython", "littleutils", "pytest", "rich"] -[[package]] -name = "faiss-gpu" -version = "1.7.2" -description = "A library for efficient similarity search and clustering of dense vectors." -category = "dev" -optional = false -python-versions = "*" - -[[package]] -name = "fastapi" -version = "0.112.1" -description = "FastAPI framework, high performance, easy to learn, fast to code, ready for production" -category = "dev" -optional = false -python-versions = ">=3.8" - -[package.dependencies] -pydantic = ">=1.7.4,<1.8 || >1.8,<1.8.1 || >1.8.1,<2.0.0 || >2.0.0,<2.0.1 || >2.0.1,<2.1.0 || >2.1.0,<3.0.0" -starlette = ">=0.37.2,<0.39.0" -typing-extensions = ">=4.8.0" - -[package.extras] -all = ["email_validator (>=2.0.0)", "fastapi-cli[standard] (>=0.0.5)", "httpx (>=0.23.0)", "itsdangerous (>=1.1.0)", "jinja2 (>=2.11.2)", "orjson (>=3.2.1)", "pydantic-extra-types (>=2.0.0)", "pydantic-settings (>=2.0.0)", "python-multipart (>=0.0.7)", "pyyaml (>=5.3.1)", "ujson (>=4.0.1,!=4.0.2,!=4.1.0,!=4.2.0,!=4.3.0,!=5.0.0,!=5.1.0)", "uvicorn[standard] (>=0.12.0)"] -standard = ["email_validator (>=2.0.0)", "fastapi-cli[standard] (>=0.0.5)", "httpx (>=0.23.0)", "jinja2 (>=2.11.2)", "python-multipart (>=0.0.7)", "uvicorn[standard] (>=0.12.0)"] - [[package]] name = "fastjsonschema" version = "2.20.0" @@ -882,14 +798,6 @@ category = "main" optional = false python-versions = ">=3.7" -[[package]] -name = "hjson" -version = "3.1.0" -description = "Hjson, a user interface for JSON." -category = "dev" -optional = false -python-versions = "*" - [[package]] name = "httpcore" version = "1.0.5" @@ -908,17 +816,6 @@ http2 = ["h2 (>=3,<5)"] socks = ["socksio (>=1.0.0,<2.0.0)"] trio = ["trio (>=0.22.0,<0.26.0)"] -[[package]] -name = "httptools" -version = "0.6.1" -description = "A collection of framework independent HTTP protocol utils." -category = "dev" -optional = false -python-versions = ">=3.8.0" - -[package.extras] -test = ["Cython (>=0.29.24,<0.30.0)"] - [[package]] name = "httpx" version = "0.27.0" @@ -942,7 +839,7 @@ socks = ["socksio (>=1.0.0,<2.0.0)"] [[package]] name = "huggingface-hub" -version = "0.24.5" +version = "0.24.6" description = "Client library to download and publish models, datasets and other repos on the huggingface.co hub" category = "main" optional = false @@ -985,11 +882,11 @@ requests = ">=2.27.1,<3.0.0" [[package]] name = "idna" -version = "3.7" +version = "3.8" description = "Internationalized Domain Names in Applications (IDNA)" category = "main" optional = false -python-versions = ">=3.5" +python-versions = ">=3.6" [[package]] name = "imageio" @@ -1023,7 +920,7 @@ tifffile = ["tifffile"] [[package]] name = "importlib-metadata" -version = "8.2.0" +version = "8.4.0" description = "Read metadata from Python packages" category = "dev" optional = false @@ -1045,14 +942,6 @@ category = "dev" optional = false python-versions = ">=3.7" -[[package]] -name = "interegular" -version = "0.3.3" -description = "a regex intersection checker" -category = "dev" -optional = false -python-versions = ">=3.7" - [[package]] name = "iopath" version = "0.1.10" @@ -1136,7 +1025,7 @@ test-extra = ["curio", "ipython[test]", "matplotlib (!=3.2.0)", "nbformat", "num [[package]] name = "ipywidgets" -version = "8.1.3" +version = "8.1.5" description = "Jupyter interactive widgets" category = "main" optional = false @@ -1145,9 +1034,9 @@ python-versions = ">=3.7" [package.dependencies] comm = ">=0.1.3" ipython = ">=6.1.0" -jupyterlab-widgets = ">=3.0.11,<3.1.0" +jupyterlab-widgets = ">=3.0.12,<3.1.0" traitlets = ">=4.3.1" -widgetsnbextension = ">=4.0.11,<4.1.0" +widgetsnbextension = ">=4.0.12,<4.1.0" [package.extras] test = ["ipykernel", "jsonschema", "pytest (>=3.6.0)", "pytest-cov", "pytz"] @@ -1502,7 +1391,7 @@ test = ["hatch", "ipykernel", "openapi-core (>=0.18.0,<0.19.0)", "openapi-spec-v [[package]] name = "jupyterlab-widgets" -version = "3.0.11" +version = "3.0.13" description = "Jupyter interactive widgets for JupyterLab" category = "main" optional = false @@ -1510,7 +1399,7 @@ python-versions = ">=3.7" [[package]] name = "langchain-core" -version = "0.2.33" +version = "0.2.35" description = "Building applications with LLMs through composability" category = "main" optional = false @@ -1545,13 +1434,14 @@ transformers = ">=4.39.0" [[package]] name = "langsmith" -version = "0.1.99" +version = "0.1.104" description = "Client library to connect to the LangSmith LLM Tracing and Evaluation Platform." category = "main" optional = false python-versions = "<4.0,>=3.8.1" [package.dependencies] +httpx = ">=0.23.0,<1" orjson = ">=3.9.14,<4.0.0" pydantic = [ {version = ">=1,<3", markers = "python_full_version < \"3.12.4\""}, @@ -1559,20 +1449,6 @@ pydantic = [ ] requests = ">=2,<3" -[[package]] -name = "lark" -version = "1.2.2" -description = "a modern parsing library" -category = "dev" -optional = false -python-versions = ">=3.8" - -[package.extras] -atomic-cache = ["atomicwrites"] -interegular = ["interegular (>=0.3.1,<0.4.0)"] -nearley = ["js2py"] -regex = ["regex"] - [[package]] name = "lazy-loader" version = "0.4" @@ -1597,14 +1473,6 @@ category = "dev" optional = false python-versions = ">=3.8" -[[package]] -name = "llvmlite" -version = "0.43.0" -description = "lightweight wrapper around basic LLVM functionality" -category = "dev" -optional = false -python-versions = ">=3.9" - [[package]] name = "loguru" version = "0.7.2" @@ -1669,14 +1537,6 @@ docs = ["sphinx"] gmpy = ["gmpy2 (>=2.1.0a4)"] tests = ["pytest (>=4.6)"] -[[package]] -name = "msgpack" -version = "1.0.8" -description = "MessagePack serializer" -category = "dev" -optional = false -python-versions = ">=3.8" - [[package]] name = "multidict" version = "6.0.5" @@ -1698,7 +1558,7 @@ dill = ">=0.3.8" [[package]] name = "mypy" -version = "1.11.1" +version = "1.11.2" description = "Optional static typing for Python" category = "dev" optional = false @@ -1817,17 +1677,6 @@ doc = ["myst-nb (>=1.0)", "numpydoc (>=1.7)", "pillow (>=9.4)", "pydata-sphinx-t extra = ["lxml (>=4.6)", "pydot (>=2.0)", "pygraphviz (>=1.12)", "sympy (>=1.10)"] test = ["pytest (>=7.2)", "pytest-cov (>=4.0)"] -[[package]] -name = "ninja" -version = "1.11.1.1" -description = "Ninja is a small build system with a focus on speed" -category = "dev" -optional = false -python-versions = "*" - -[package.extras] -test = ["codecov (>=2.0.5)", "coverage (>=4.2)", "flake8 (>=3.0.4)", "pytest (>=4.5.0)", "pytest-cov (>=2.7.1)", "pytest-runner (>=5.1)", "pytest-virtualenv (>=1.7.0)", "virtualenv (>=15.0.3)"] - [[package]] name = "nltk" version = "3.9.1" @@ -1884,18 +1733,6 @@ jupyter-server = ">=1.8,<3" [package.extras] test = ["pytest", "pytest-console-scripts", "pytest-jupyter", "pytest-tornasync"] -[[package]] -name = "numba" -version = "0.60.0" -description = "compiling Python code using LLVM" -category = "dev" -optional = false -python-versions = ">=3.9" - -[package.dependencies] -llvmlite = ">=0.43.0dev0,<0.44" -numpy = ">=1.22,<2.1" - [[package]] name = "numpy" version = "1.26.4" @@ -1904,113 +1741,6 @@ category = "main" optional = false python-versions = ">=3.9" -[[package]] -name = "nvidia-cublas-cu12" -version = "12.1.3.1" -description = "CUBLAS native runtime libraries" -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-cuda-cupti-cu12" -version = "12.1.105" -description = "CUDA profiling tools runtime libs." -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-cuda-nvrtc-cu12" -version = "12.1.105" -description = "NVRTC native runtime libraries" -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-cuda-runtime-cu12" -version = "12.1.105" -description = "CUDA Runtime native Libraries" -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-cudnn-cu12" -version = "8.9.2.26" -description = "cuDNN runtime libraries" -category = "main" -optional = false -python-versions = ">=3" - -[package.dependencies] -nvidia-cublas-cu12 = "*" - -[[package]] -name = "nvidia-cufft-cu12" -version = "11.0.2.54" -description = "CUFFT native runtime libraries" -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-curand-cu12" -version = "10.3.2.106" -description = "CURAND native runtime libraries" -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-cusolver-cu12" -version = "11.4.5.107" -description = "CUDA solver native runtime libraries" -category = "main" -optional = false -python-versions = ">=3" - -[package.dependencies] -nvidia-cublas-cu12 = "*" -nvidia-cusparse-cu12 = "*" -nvidia-nvjitlink-cu12 = "*" - -[[package]] -name = "nvidia-cusparse-cu12" -version = "12.1.0.106" -description = "CUSPARSE native runtime libraries" -category = "main" -optional = false -python-versions = ">=3" - -[package.dependencies] -nvidia-nvjitlink-cu12 = "*" - -[[package]] -name = "nvidia-nccl-cu12" -version = "2.18.1" -description = "NVIDIA Collective Communication Library (NCCL) Runtime" -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-nvjitlink-cu12" -version = "12.6.20" -description = "Nvidia JIT LTO Library" -category = "main" -optional = false -python-versions = ">=3" - -[[package]] -name = "nvidia-nvtx-cu12" -version = "12.1.105" -description = "NVIDIA Tools Extension" -category = "main" -optional = false -python-versions = ">=3" - [[package]] name = "opencv-python" version = "4.10.0.84" @@ -2057,36 +1787,6 @@ category = "main" optional = false python-versions = ">=3.8" -[[package]] -name = "outlines" -version = "0.0.34" -description = "Probabilistic Generative Model Programming" -category = "dev" -optional = false -python-versions = ">=3.8" - -[package.dependencies] -cloudpickle = "*" -diskcache = "*" -interegular = "*" -jinja2 = "*" -joblib = "*" -jsonschema = "*" -lark = "*" -nest-asyncio = "*" -numba = "*" -numpy = "*" -pydantic = ">=2.0" -referencing = "*" -requests = "*" -scipy = "*" -torch = ">=2.1.0" -transformers = "*" - -[package.extras] -serve = ["fastapi", "pydantic (>=2.0)", "ray (==2.9.0)", "uvicorn", "vllm (>=0.3.0)"] -test = ["accelerate", "beartype (<0.16.0)", "coverage[toml] (>=5.1)", "datasets", "diff-cover", "huggingface-hub", "llama-cpp-python (>=0.2.42)", "pre-commit", "pytest", "pytest-benchmark", "pytest-cov", "pytest-mock", "responses", "transformers"] - [[package]] name = "overrides" version = "3.1.0" @@ -2346,14 +2046,6 @@ python-versions = "*" [package.extras] tests = ["pytest"] -[[package]] -name = "py-cpuinfo" -version = "9.0.0" -description = "Get CPU info with pure Python" -category = "dev" -optional = false -python-versions = "*" - [[package]] name = "pyarrow" version = "17.0.0" @@ -2511,17 +2203,9 @@ typing-extensions = "*" wrapt = "*" zipp = "*" -[[package]] -name = "pynvml" -version = "11.5.0" -description = "Python Bindings for the NVIDIA Management Library" -category = "dev" -optional = false -python-versions = ">=3.6" - [[package]] name = "pyparsing" -version = "3.1.2" +version = "3.1.4" description = "pyparsing module - Classes and methods to define and execute parsing grammars" category = "dev" optional = false @@ -2633,7 +2317,7 @@ python-versions = ">=3.8" [[package]] name = "pyzmq" -version = "26.1.1" +version = "26.2.0" description = "Python bindings for 0MQ" category = "main" optional = false @@ -2678,40 +2362,6 @@ packaging = "*" [package.extras] test = ["pytest (>=6,!=7.0.0,!=7.0.1)", "pytest-cov (>=3.0.0)", "pytest-qt"] -[[package]] -name = "ray" -version = "2.34.0" -description = "Ray provides a simple, universal API for building distributed applications." -category = "dev" -optional = false -python-versions = ">=3.8" - -[package.dependencies] -aiosignal = "*" -click = ">=7.0" -filelock = "*" -frozenlist = "*" -jsonschema = "*" -msgpack = ">=1.0.0,<2.0.0" -packaging = "*" -protobuf = ">=3.15.3,<3.19.5 || >3.19.5" -pyyaml = "*" -requests = "*" - -[package.extras] -air = ["aiohttp (>=3.7)", "aiohttp-cors", "colorful", 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"watchfiles"] -client = ["grpcio (!=1.56.0)"] -cpp = ["ray-cpp (==2.34.0)"] -data = ["fsspec", "numpy (>=1.20)", "pandas (>=1.3)", "pyarrow (>=6.0.1)"] -default = ["aiohttp (>=3.7)", "aiohttp-cors", "colorful", "grpcio (>=1.32.0)", "grpcio (>=1.42.0)", "memray", "opencensus", "prometheus-client (>=0.7.1)", "py-spy (>=0.2.0)", "pydantic (<2.0.0 || >=2.5.0,<3)", "requests", "smart-open", "virtualenv (>=20.0.24,!=20.21.1)"] -observability = ["opentelemetry-api", "opentelemetry-exporter-otlp", "opentelemetry-sdk"] -rllib = ["dm-tree", "fsspec", "gymnasium (==0.28.1)", "lz4", "pandas", "pyarrow (>=6.0.1)", "pyyaml", "requests", "rich", "scikit-image", "scipy", "tensorboardX (>=1.9)", "typer"] -serve = ["aiohttp (>=3.7)", "aiohttp-cors", "colorful", "fastapi", "grpcio (>=1.32.0)", "grpcio (>=1.42.0)", "memray", "opencensus", "prometheus-client (>=0.7.1)", "py-spy (>=0.2.0)", "pydantic (<2.0.0 || >=2.5.0,<3)", "requests", "smart-open", "starlette", "uvicorn[standard]", "virtualenv 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authors = ["T Mega Alignment Team " ] @@ -15,7 +15,7 @@ peft = "0.8.2" typer ="^0.9.0" wandb ="^0.15.3" scipy = "^1.1.0" -torch = "^2.0.0" +torch = "2.1.0" numpy = "^1.21" tomlkit ="^0.11.8" platformdirs ="^3.5.3" @@ -45,15 +45,6 @@ timm ="^0.9.7" opencv-python = "^4.10.0.84" langchain-huggingface = "^0.0.3" -[tool.poetry.group.deepspeed.dependencies] -accelerate = "0.27" -deepspeed = "0.12" - -[tool.poetry.group.gpu.dependencies] -faiss-gpu ="^1.7.2" -xformers = "^0.0.23.post1" -vllm = "^0.4.0.post1" - [tool.poetry.dev-dependencies] coverage = "^7.2.7" pytest = "^7.3.2" @@ -67,6 +58,16 @@ pylint-gitlab = "^1.2.0" pydantic-core = "^2.18.2" annotated-types = "^0.6.0" +[tool.poetry.extras] +deepspeed = [ + "deepspeed==0.12", + "accelerate==0.27" +] +gpu = [ + "faiss-gpu>=1.7.2", + "xformers>=0.0.23.post1", + "vllm>=0.4.0.post1" +] [build-system] requires = ["poetry-core>=1.0.0"] From 46bec62da8f464b1fd54437731b59ee39a9bb4a6 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 15:59:46 +0000 Subject: [PATCH 17/20] fix poetry extras --- .github/workflows/tests.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 3123598..5147778 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -20,7 +20,7 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install --all-extras + run: poetry install --extras "deepspeed gpu" - name: Run tests run: poetry run make tests linters: @@ -41,6 +41,6 @@ jobs: with: poetry-version: ${{ matrix.poetry-version }} - name: Install dependencies - run: poetry install --all-extras + run: poetry install --extras "deepspeed gpu" - name: Run linters run: poetry run make lint From db068fb691bee754eb7365f1f5956a90797804e0 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Mon, 26 Aug 2024 16:59:01 +0000 Subject: [PATCH 18/20] update poetry --- poetry.lock | 1238 +++++++++++++++++++++++++++++++++++++++++++++--- pyproject.toml | 20 +- 2 files changed, 1169 insertions(+), 89 deletions(-) diff --git a/poetry.lock b/poetry.lock index cfd023f..6e349f7 100644 --- a/poetry.lock +++ b/poetry.lock @@ -8,15 +8,15 @@ python-versions = ">=3.7" [[package]] name = "accelerate" -version = "0.33.0" +version = "0.27.0" description = "Accelerate" category = "main" optional = false python-versions = ">=3.8.0" [package.dependencies] -huggingface-hub = ">=0.21.0" -numpy = ">=1.17,<2.0.0" +huggingface-hub = "*" +numpy = ">=1.17" packaging = ">=20.0" psutil = "*" pyyaml = "*" @@ -24,15 +24,14 @@ safetensors = ">=0.3.1" torch = ">=1.10.0" [package.extras] -deepspeed = ["deepspeed (<=0.14.0)"] -dev = ["bitsandbytes", "black (>=23.1,<24.0)", "datasets", "diffusers", "evaluate", "hf-doc-builder (>=0.3.0)", "parameterized", "pytest (>=7.2.0,<=8.0.0)", "pytest-subtests", "pytest-xdist", "rich", "ruff (>=0.2.1,<0.3.0)", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] -quality = ["black (>=23.1,<24.0)", "hf-doc-builder (>=0.3.0)", "ruff (>=0.2.1,<0.3.0)"] +dev = ["bitsandbytes", "black (>=23.1,<24.0)", "datasets", "deepspeed (<0.13.0)", "evaluate", "hf-doc-builder (>=0.3.0)", "parameterized", "pytest", "pytest-subtests", "pytest-xdist", "rich", "ruff (>=0.1.15,<0.2.0)", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +quality = ["black (>=23.1,<24.0)", "hf-doc-builder (>=0.3.0)", "ruff (>=0.1.15,<0.2.0)"] rich = ["rich"] sagemaker = ["sagemaker"] -test-dev = ["bitsandbytes", "datasets", "diffusers", "evaluate", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] -test-prod = ["parameterized", "pytest (>=7.2.0,<=8.0.0)", "pytest-subtests", "pytest-xdist"] +test-dev = ["bitsandbytes", "datasets", "deepspeed (<0.13.0)", "evaluate", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +test-prod = ["parameterized", "pytest", "pytest-subtests", "pytest-xdist"] test-trackers = ["comet-ml", "dvclive", "tensorboard", "wandb"] -testing = ["bitsandbytes", "datasets", "diffusers", "evaluate", "parameterized", "pytest (>=7.2.0,<=8.0.0)", "pytest-subtests", "pytest-xdist", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] +testing = ["bitsandbytes", "datasets", "deepspeed (<0.13.0)", "evaluate", "parameterized", "pytest", "pytest-subtests", "pytest-xdist", "scikit-learn", "scipy", "timm", "torchpippy (>=0.2.0)", "tqdm", "transformers"] [[package]] name = "aiohappyeyeballs" @@ -446,6 +445,25 @@ python-versions = ">=3.7" [package.dependencies] colorama = {version = "*", markers = "platform_system == \"Windows\""} +[[package]] +name = "cloudpickle" +version = "3.0.0" +description = "Pickler class to extend the standard pickle.Pickler functionality" +category = "main" +optional = true +python-versions = ">=3.8" + +[[package]] +name = "cmake" +version = "3.30.2" +description = "CMake is an open-source, cross-platform family of tools designed to build, test and package software" +category = "main" +optional = true +python-versions = ">=3.7" + +[package.extras] +test = ["coverage (>=4.2)", "pytest (>=3.0.3)", "pytest-cov (>=2.4.0)"] + [[package]] name = "colorama" version = "0.4.6" @@ -536,6 +554,39 @@ category = "main" optional = false python-versions = ">=3.5" +[[package]] +name = "deepspeed" +version = "0.12.0" +description = "DeepSpeed library" +category = "main" +optional = true +python-versions = "*" + +[package.dependencies] +hjson = "*" +ninja = "*" +numpy = "*" +packaging = ">=20.0" +psutil = "*" +py-cpuinfo = "*" +pydantic = "*" +pynvml = "*" +torch = "*" +tqdm = "*" + +[package.extras] +1bit-mpi = ["mpi4py"] +all = ["accelerate", "autodoc_pydantic", "clang-format (==16.0.2)", "coverage", "deepspeed-kernels", "diffusers", "docutils (<0.18)", "future", "google", "hjson", "importlib-metadata (>=4)", "lm-eval (==0.3.0)", "mpi4py", "mup", "neural-compressor (==2.1.0)", "packaging", "pre-commit (>=2.20.0)", "protobuf", "psutil", "py-cpuinfo", "pydantic (<2.0.0)", "pytest", "pytest-forked", "pytest-randomly", "pytest-xdist", "recommonmark", "sphinx", "sphinx-rtd-theme", "sphinx_rtd_theme", "tabulate", "tensorboard", "torch", "torchvision", "tqdm", "transformers", "transformers[sentencepiece]", "triton (==1.0.0)", "triton (==2.0.0.dev20221202)", "triton (>=2.1.0)", "wandb", "xgboost"] +autotuning = ["tabulate"] +autotuning-ml = ["hjson", "tabulate", "xgboost"] +dev = ["accelerate", "clang-format (==16.0.2)", "coverage", "deepspeed-kernels", "docutils (<0.18)", "future", "importlib-metadata (>=4)", "mup", "pre-commit (>=2.20.0)", "pytest", "pytest-forked", "pytest-randomly", "pytest-xdist", "recommonmark", "sphinx", "sphinx-rtd-theme", "tensorboard", "torchvision", "transformers", "wandb"] +inf = ["google", "lm-eval (==0.3.0)", "protobuf", "transformers", "transformers[sentencepiece]"] +readthedocs = ["autodoc_pydantic", "docutils (<0.18)", "hjson", "packaging", "psutil", "py-cpuinfo", "pydantic (<2.0.0)", "recommonmark", "sphinx_rtd_theme", "torch", "tqdm"] +sd = ["diffusers", "triton (==2.0.0.dev20221202)"] +sparse = ["neural-compressor (==2.1.0)"] +sparse-attn = ["triton (==1.0.0)"] +triton = ["triton (>=2.1.0)"] + [[package]] name = "defusedxml" version = "0.7.1" @@ -556,6 +607,14 @@ python-versions = ">=3.8" graph = ["objgraph (>=1.7.2)"] profile = ["gprof2dot (>=2022.7.29)"] +[[package]] +name = "diskcache" +version = "5.6.3" +description = "Disk Cache -- Disk and file backed persistent cache." +category = "main" +optional = true +python-versions = ">=3" + [[package]] name = "docker-pycreds" version = "0.4.0" @@ -640,6 +699,31 @@ python-versions = ">=3.5" [package.extras] tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipython", "littleutils", "pytest", "rich"] +[[package]] +name = "faiss-gpu" +version = "1.7.2" +description = "A library for efficient similarity search and clustering of dense vectors." +category = "main" +optional = true +python-versions = "*" + +[[package]] +name = "fastapi" +version = "0.112.2" +description = "FastAPI framework, high performance, easy to learn, fast to code, ready for production" +category = "main" +optional = true +python-versions = ">=3.8" + +[package.dependencies] +pydantic = ">=1.7.4,<1.8 || >1.8,<1.8.1 || >1.8.1,<2.0.0 || >2.0.0,<2.0.1 || >2.0.1,<2.1.0 || >2.1.0,<3.0.0" +starlette = ">=0.37.2,<0.39.0" +typing-extensions = ">=4.8.0" + +[package.extras] +all = ["email-validator (>=2.0.0)", "fastapi-cli[standard] (>=0.0.5)", "httpx (>=0.23.0)", "itsdangerous (>=1.1.0)", "jinja2 (>=2.11.2)", "orjson (>=3.2.1)", "pydantic-extra-types (>=2.0.0)", "pydantic-settings (>=2.0.0)", "python-multipart (>=0.0.7)", "pyyaml (>=5.3.1)", "ujson (>=4.0.1,!=4.0.2,!=4.1.0,!=4.2.0,!=4.3.0,!=5.0.0,!=5.1.0)", "uvicorn[standard] (>=0.12.0)"] +standard = ["email-validator (>=2.0.0)", "fastapi-cli[standard] (>=0.0.5)", "httpx (>=0.23.0)", "jinja2 (>=2.11.2)", "python-multipart (>=0.0.7)", "uvicorn[standard] (>=0.12.0)"] + [[package]] name = "fastjsonschema" version = "2.20.0" @@ -798,6 +882,14 @@ category = "main" optional = false python-versions = ">=3.7" +[[package]] +name = "hjson" +version = "3.1.0" +description = "Hjson, a user interface for JSON." +category = "main" +optional = true +python-versions = "*" + [[package]] name = "httpcore" version = "1.0.5" @@ -816,6 +908,17 @@ http2 = ["h2 (>=3,<5)"] socks = ["socksio (>=1.0.0,<2.0.0)"] trio = ["trio (>=0.22.0,<0.26.0)"] +[[package]] +name = "httptools" +version = "0.6.1" +description = "A collection of framework independent HTTP protocol utils." +category = "main" +optional = true +python-versions = ">=3.8.0" + +[package.extras] +test = ["Cython (>=0.29.24,<0.30.0)"] + [[package]] name = "httpx" version = "0.27.0" @@ -942,6 +1045,14 @@ category = "dev" optional = false python-versions = ">=3.7" +[[package]] +name = "interegular" +version = "0.3.3" +description = "a regex intersection checker" +category = "main" +optional = true +python-versions = ">=3.7" + [[package]] name = "iopath" version = "0.1.10" @@ -1449,6 +1560,20 @@ pydantic = [ ] requests = ">=2,<3" +[[package]] +name = "lark" +version = "1.2.2" +description = "a modern parsing library" +category = "main" +optional = true +python-versions = ">=3.8" + +[package.extras] +atomic-cache = ["atomicwrites"] +interegular = ["interegular (>=0.3.1,<0.4.0)"] +nearley = ["js2py"] +regex = ["regex"] + [[package]] name = "lazy-loader" version = "0.4" @@ -1473,6 +1598,14 @@ category = "dev" optional = false python-versions = ">=3.8" +[[package]] +name = "llvmlite" +version = "0.43.0" +description = "lightweight wrapper around basic LLVM functionality" +category = "main" +optional = true +python-versions = ">=3.9" + [[package]] name = "loguru" version = "0.7.2" @@ -1537,6 +1670,14 @@ docs = ["sphinx"] gmpy = ["gmpy2 (>=2.1.0a4)"] tests = ["pytest (>=4.6)"] +[[package]] +name = "msgpack" +version = "1.0.8" +description = "MessagePack serializer" +category = "main" +optional = true +python-versions = ">=3.8" + [[package]] name = "multidict" version = "6.0.5" @@ -1677,6 +1818,17 @@ doc = ["myst-nb (>=1.0)", "numpydoc (>=1.7)", "pillow (>=9.4)", "pydata-sphinx-t extra = ["lxml (>=4.6)", "pydot (>=2.0)", "pygraphviz (>=1.12)", "sympy (>=1.10)"] test = ["pytest (>=7.2)", "pytest-cov (>=4.0)"] +[[package]] +name = "ninja" +version = "1.11.1.1" +description = "Ninja is a small build system with a focus on speed" +category = "main" +optional = true +python-versions = "*" + +[package.extras] +test = ["codecov (>=2.0.5)", "coverage (>=4.2)", "flake8 (>=3.0.4)", "pytest (>=4.5.0)", "pytest-cov (>=2.7.1)", "pytest-runner (>=5.1)", "pytest-virtualenv (>=1.7.0)", "virtualenv (>=15.0.3)"] + [[package]] name = "nltk" version = "3.9.1" @@ -1733,6 +1885,18 @@ jupyter-server = ">=1.8,<3" [package.extras] test = ["pytest", "pytest-console-scripts", "pytest-jupyter", "pytest-tornasync"] +[[package]] +name = "numba" +version = "0.60.0" +description = "compiling Python code using LLVM" +category = "main" +optional = true +python-versions = ">=3.9" + +[package.dependencies] +llvmlite = ">=0.43.0dev0,<0.44" +numpy = ">=1.22,<2.1" + [[package]] name = "numpy" version = "1.26.4" @@ -1741,6 +1905,113 @@ category = "main" optional = false python-versions = ">=3.9" +[[package]] +name = "nvidia-cublas-cu12" +version = "12.1.3.1" +description = "CUBLAS native runtime libraries" +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-cuda-cupti-cu12" +version = "12.1.105" +description = "CUDA profiling tools runtime libs." +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-cuda-nvrtc-cu12" +version = "12.1.105" +description = "NVRTC native runtime libraries" +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-cuda-runtime-cu12" +version = "12.1.105" +description = "CUDA Runtime native Libraries" +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-cudnn-cu12" +version = "8.9.2.26" +description = "cuDNN runtime libraries" +category = "main" +optional = false +python-versions = ">=3" + +[package.dependencies] +nvidia-cublas-cu12 = "*" + +[[package]] +name = "nvidia-cufft-cu12" +version = "11.0.2.54" +description = "CUFFT native runtime libraries" +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-curand-cu12" +version = "10.3.2.106" +description = "CURAND native runtime libraries" +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-cusolver-cu12" +version = "11.4.5.107" +description = "CUDA solver native runtime libraries" +category = "main" +optional = false +python-versions = ">=3" + +[package.dependencies] +nvidia-cublas-cu12 = "*" +nvidia-cusparse-cu12 = "*" +nvidia-nvjitlink-cu12 = "*" + +[[package]] +name = "nvidia-cusparse-cu12" +version = "12.1.0.106" +description = "CUSPARSE native runtime libraries" +category = "main" +optional = false +python-versions = ">=3" + +[package.dependencies] +nvidia-nvjitlink-cu12 = "*" + +[[package]] +name = "nvidia-nccl-cu12" +version = "2.18.1" +description = "NVIDIA Collective Communication Library (NCCL) Runtime" +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-nvjitlink-cu12" +version = "12.6.20" +description = "Nvidia JIT LTO Library" +category = "main" +optional = false +python-versions = ">=3" + +[[package]] +name = "nvidia-nvtx-cu12" +version = "12.1.105" +description = "NVIDIA Tools Extension" +category = "main" +optional = false +python-versions = ">=3" + [[package]] name = "opencv-python" version = "4.10.0.84" @@ -1787,6 +2058,36 @@ category = "main" optional = false python-versions = ">=3.8" +[[package]] +name = "outlines" +version = "0.0.34" +description = "Probabilistic Generative Model Programming" +category = "main" +optional = true +python-versions = ">=3.8" + +[package.dependencies] +cloudpickle = "*" +diskcache = "*" +interegular = "*" +jinja2 = "*" +joblib = "*" +jsonschema = "*" +lark = "*" +nest-asyncio = "*" +numba = "*" +numpy = "*" +pydantic = ">=2.0" +referencing = "*" +requests = "*" +scipy = "*" +torch = ">=2.1.0" +transformers = "*" + +[package.extras] +serve = ["fastapi", "pydantic (>=2.0)", "ray (==2.9.0)", "uvicorn", "vllm (>=0.3.0)"] +test = ["accelerate", "beartype (<0.16.0)", "coverage[toml] (>=5.1)", "datasets", "diff-cover", "huggingface-hub", "llama-cpp-python (>=0.2.42)", "pre-commit", "pytest", "pytest-benchmark", "pytest-cov", "pytest-mock", "responses", "transformers"] + [[package]] name = "overrides" version = "3.1.0" @@ -2046,6 +2347,14 @@ python-versions = "*" [package.extras] tests = ["pytest"] +[[package]] +name = "py-cpuinfo" +version = "9.0.0" +description = "Get CPU info with pure Python" +category = "main" +optional = true +python-versions = "*" + [[package]] name = "pyarrow" version = "17.0.0" @@ -2203,6 +2512,14 @@ typing-extensions = "*" wrapt = "*" zipp = "*" +[[package]] +name = "pynvml" +version = "11.5.0" +description = "Python Bindings for the NVIDIA Management Library" +category = "main" +optional = true +python-versions = ">=3.6" + [[package]] name = "pyparsing" version = "3.1.4" @@ -2362,6 +2679,40 @@ packaging = "*" [package.extras] test = ["pytest (>=6,!=7.0.0,!=7.0.1)", "pytest-cov (>=3.0.0)", "pytest-qt"] +[[package]] +name = "ray" +version = "2.34.0" +description = "Ray provides a simple, universal API for building distributed applications." +category = "main" +optional = true +python-versions = ">=3.8" + +[package.dependencies] +aiosignal = "*" +click = ">=7.0" +filelock = "*" +frozenlist = "*" +jsonschema = "*" +msgpack = ">=1.0.0,<2.0.0" +packaging = "*" +protobuf = ">=3.15.3,<3.19.5 || >3.19.5" +pyyaml = "*" +requests = "*" + +[package.extras] +air = ["aiohttp (>=3.7)", "aiohttp-cors", "colorful", "fastapi", "fsspec", "grpcio (>=1.32.0)", "grpcio (>=1.42.0)", "memray", "numpy (>=1.20)", "opencensus", "pandas", "pandas (>=1.3)", "prometheus-client (>=0.7.1)", "py-spy (>=0.2.0)", "pyarrow (>=6.0.1)", "pydantic (<2.0.0 || >=2.5.0,<3)", "requests", "smart-open", "starlette", "tensorboardX (>=1.9)", "uvicorn[standard]", "virtualenv (>=20.0.24,!=20.21.1)", "watchfiles"] +all = ["aiohttp (>=3.7)", "aiohttp-cors", "colorful", "dm-tree", "fastapi", "fsspec", "grpcio (!=1.56.0)", "grpcio (>=1.32.0)", "grpcio (>=1.42.0)", "gymnasium (==0.28.1)", "lz4", "memray", "numpy (>=1.20)", "opencensus", "opentelemetry-api", "opentelemetry-exporter-otlp", "opentelemetry-sdk", "pandas", "pandas 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name = "torch" -version = "2.1.0" +version = "2.1.2" description = "Tensors and Dynamic neural networks in Python with strong GPU acceleration" category = "main" optional = false @@ -2885,26 +3265,39 @@ filelock = "*" fsspec = "*" jinja2 = "*" networkx = "*" +nvidia-cublas-cu12 = {version = "12.1.3.1", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""} +nvidia-cuda-cupti-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""} +nvidia-cuda-nvrtc-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""} +nvidia-cuda-runtime-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""} +nvidia-cudnn-cu12 = {version = "8.9.2.26", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""} +nvidia-cufft-cu12 = {version = "11.0.2.54", markers = "platform_system == \"Linux\" and platform_machine == 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+xformers = { version = "^0.0.23.post1", optional = true } +vllm = { version = "^0.4.0.post1", optional = true } +deepspeed = { version = "0.12", optional = true } +accelerate = { version = "0.27", optional = true } + + [tool.poetry.dev-dependencies] coverage = "^7.2.7" pytest = "^7.3.2" @@ -59,15 +66,8 @@ pydantic-core = "^2.18.2" annotated-types = "^0.6.0" [tool.poetry.extras] -deepspeed = [ - "deepspeed==0.12", - "accelerate==0.27" -] -gpu = [ - "faiss-gpu>=1.7.2", - "xformers>=0.0.23.post1", - "vllm>=0.4.0.post1" -] +deepspeed = ["deepspeed", "accelerate"] +gpu = ["faiss-gpu", "xformers", "vllm"] [build-system] requires = ["poetry-core>=1.0.0"] From b7b7a9029a4e5144fbde26511fa9c96c7a577811 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Wed, 28 Aug 2024 11:59:05 +0000 Subject: [PATCH 19/20] add pre-commit config --- .pre-commit-config.yaml | 8 ++++++++ 1 file changed, 8 insertions(+) create mode 100644 .pre-commit-config.yaml diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml new file mode 100644 index 0000000..e6be0dd --- /dev/null +++ b/.pre-commit-config.yaml @@ -0,0 +1,8 @@ +repos: +- repo: local + hooks: + - id: lint + entry: poetry run make pretty + language: system + types: [python] + stages: [commit] \ No newline at end of file From d476be3a2fe875181cb2a3822c598be82df0db92 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=D0=9C=D0=B0=D0=BB=D0=B0=D1=85=D0=BE=D0=B2=20=D0=90=D0=BB?= =?UTF-8?q?=D0=B5=D0=BA=D1=81=D0=B5=D0=B9=20=D0=9F=D0=B0=D0=B2=D0=BB=D0=BE?= =?UTF-8?q?=D0=B2=D0=B8=D1=87?= Date: Wed, 28 Aug 2024 12:02:14 +0000 Subject: [PATCH 20/20] fix pre-commit config --- .pre-commit-config.yaml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index e6be0dd..03ff82d 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,7 +1,8 @@ repos: - repo: local hooks: - - id: lint + - id: poetry-make-pretty + name: make pretty entry: poetry run make pretty language: system types: [python]