{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":676654731,"defaultBranch":"main","name":"miRNA-periodontal-disease","ownerLogin":"uflcod","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-08-09T17:39:21.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/109989373?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1702658265.0","currentOid":""},"activityList":{"items":[{"before":"4b0d82aaae95e4e20afa16f456dbe6d7111e0e2d","after":"5c96990e947105b1ddbd1f0935ef0df85427e717","ref":"refs/heads/main","pushedAt":"2024-02-01T21:22:58.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"add F. nucleatum figures","shortMessageHtmlLink":"add F. nucleatum figures"}},{"before":"94ddd8e18e72ebf4244effa0b42d2278ea4af760","after":"123e9b4ec2f0476e45d8a9fac65df61c1fe5143a","ref":"refs/heads/papermill","pushedAt":"2023-12-20T00:39:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"saksheesb","name":null,"path":"/saksheesb","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17769649?s=80&v=4"},"commit":{"message":"Changes for parameterizing output file names in sg notebooks","shortMessageHtmlLink":"Changes for parameterizing output file names in sg notebooks"}},{"before":"e280ce65378187da7d53a2d0aa5aeed81fe08d60","after":"4b0d82aaae95e4e20afa16f456dbe6d7111e0e2d","ref":"refs/heads/main","pushedAt":"2023-12-17T22:35:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"add lr mlp svc figures","shortMessageHtmlLink":"add lr mlp svc figures"}},{"before":"da437d7319fe11d788e4ed79a22ef20731f751c3","after":"e280ce65378187da7d53a2d0aa5aeed81fe08d60","ref":"refs/heads/main","pushedAt":"2023-12-17T22:34:35.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"rename lr notebook","shortMessageHtmlLink":"rename lr notebook"}},{"before":"190b72c7c6a489fb73e4fcb077b0b1e146aa93ef","after":null,"ref":"refs/heads/fix-16-week-sham-files","pushedAt":"2023-12-15T16:37:45.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"}},{"before":"7ffcf0bf94d8211116f40e68d82742d547bd1305","after":"da437d7319fe11d788e4ed79a22ef20731f751c3","ref":"refs/heads/main","pushedAt":"2023-12-15T16:37:44.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"Merge pull request #10 from uflcod/fix-16-week-sham-files\n\nfix file name for S.gordonii sham data","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2044027915\" data-permission-text=\"Title is private\" data-url=\"https://github.com/uflcod/miRNA-periodontal-disease/issues/10\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/uflcod/miRNA-periodontal-disease/pull/10/hovercard\" href=\"https://github.com/uflcod/miRNA-periodontal-disease/pull/10\">#10</a> from uflcod/fix-16-week-sham-files"}},{"before":null,"after":"190b72c7c6a489fb73e4fcb077b0b1e146aa93ef","ref":"refs/heads/fix-16-week-sham-files","pushedAt":"2023-12-15T16:35:27.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"fixed file name for S.gordonii sham data","shortMessageHtmlLink":"fixed file name for S.gordonii sham data"}},{"before":"7ffcf0bf94d8211116f40e68d82742d547bd1305","after":"94ddd8e18e72ebf4244effa0b42d2278ea4af760","ref":"refs/heads/papermill","pushedAt":"2023-12-14T18:38:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"saksheesb","name":null,"path":"/saksheesb","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17769649?s=80&v=4"},"commit":{"message":"Changes for parameterizing sg notebooks","shortMessageHtmlLink":"Changes for parameterizing sg notebooks"}},{"before":null,"after":"7ffcf0bf94d8211116f40e68d82742d547bd1305","ref":"refs/heads/papermill","pushedAt":"2023-12-09T20:09:44.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"saksheesb","name":null,"path":"/saksheesb","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17769649?s=80&v=4"},"commit":{"message":"Merge pull request #9 from uflcod/nanostring-data-functions\n\nNanostring data functions","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"1995869242\" data-permission-text=\"Title is private\" data-url=\"https://github.com/uflcod/miRNA-periodontal-disease/issues/9\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/uflcod/miRNA-periodontal-disease/pull/9/hovercard\" href=\"https://github.com/uflcod/miRNA-periodontal-disease/pull/9\">#9</a> from uflcod/nanostring-data-functions"}},{"before":"ddcddf07f9d81efbe1315e8b392230a02f6f05e6","after":null,"ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-16T01:32:33.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"}},{"before":"4a177ed27d9d88eb3246b5ab20f0bb9d69480ca0","after":"7ffcf0bf94d8211116f40e68d82742d547bd1305","ref":"refs/heads/main","pushedAt":"2023-11-16T01:32:32.000Z","pushType":"pr_merge","commitsCount":19,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"Merge pull request #9 from uflcod/nanostring-data-functions\n\nNanostring data functions","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"1995869242\" data-permission-text=\"Title is private\" data-url=\"https://github.com/uflcod/miRNA-periodontal-disease/issues/9\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/uflcod/miRNA-periodontal-disease/pull/9/hovercard\" href=\"https://github.com/uflcod/miRNA-periodontal-disease/pull/9\">#9</a> from uflcod/nanostring-data-functions"}},{"before":"679af4c0bb6af754b3ff65b00e269d5b980bfaca","after":"ddcddf07f9d81efbe1315e8b392230a02f6f05e6","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-16T01:27:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"add sg figures","shortMessageHtmlLink":"add sg figures"}},{"before":"e31d173f21b38fc1c85494641f0cc943f240ec32","after":"679af4c0bb6af754b3ff65b00e269d5b980bfaca","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-16T01:27:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"recreate tf figures","shortMessageHtmlLink":"recreate tf figures"}},{"before":"c07a5e32feefc71e34c5c9f57fa305561f326cd6","after":"e31d173f21b38fc1c85494641f0cc943f240ec32","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-16T01:26:31.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"verify notebooks are running","shortMessageHtmlLink":"verify notebooks are running"}},{"before":"9e6a3aca50ec1f19961088eff3a674d29d27a915","after":"c07a5e32feefc71e34c5c9f57fa305561f326cd6","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-16T01:19:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"modify to use make_mirna_nanostring_df","shortMessageHtmlLink":"modify to use make_mirna_nanostring_df"}},{"before":"5295b58bea9fb35d787be70f40c8229097f87dc9","after":"9e6a3aca50ec1f19961088eff3a674d29d27a915","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-16T01:16:27.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"modify to use make_mirna_nanostring_df","shortMessageHtmlLink":"modify to use make_mirna_nanostring_df"}},{"before":"3eedca1a821acdf8b63ea54167a5a32af8d2e256","after":"5295b58bea9fb35d787be70f40c8229097f87dc9","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-16T01:10:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"fix issue of reading nulll columns","shortMessageHtmlLink":"fix issue of reading nulll columns"}},{"before":"92f75b47ce98939ee0222029b777dfe699296ac9","after":"3eedca1a821acdf8b63ea54167a5a32af8d2e256","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-15T21:46:09.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"modify to use make_mirna_nanostring_df","shortMessageHtmlLink":"modify to use make_mirna_nanostring_df"}},{"before":"b26671433b79cc1b34f90a0232d84eaf08e65481","after":"92f75b47ce98939ee0222029b777dfe699296ac9","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-14T22:30:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"upate paths for Streptococcus_gordonii","shortMessageHtmlLink":"upate paths for Streptococcus_gordonii"}},{"before":"c0ad58ef5f608ac786bce1f7ec3da8bd8fe4a5ae","after":"b26671433b79cc1b34f90a0232d84eaf08e65481","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-14T22:25:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"update data path","shortMessageHtmlLink":"update data path"}},{"before":"01ccd5a827f09968d3a39e15967f23fc18f9a96e","after":"c0ad58ef5f608ac786bce1f7ec3da8bd8fe4a5ae","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-14T22:25:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"update data path","shortMessageHtmlLink":"update data path"}},{"before":"43da8357de590a5f8f05537c61021a5e5dcf9fd7","after":"01ccd5a827f09968d3a39e15967f23fc18f9a96e","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-14T22:20:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"modify data path for TF analysis","shortMessageHtmlLink":"modify data path for TF analysis"}},{"before":"3dcdd3fa1ff8dea66baca160c2554fe3c4e3c771","after":"43da8357de590a5f8f05537c61021a5e5dcf9fd7","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-14T19:00:05.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"Merge branch 'main' into nanostring-data-functions","shortMessageHtmlLink":"Merge branch 'main' into nanostring-data-functions"}},{"before":"115cc0472404964b6522ba693de638891a13f2c6","after":"4a177ed27d9d88eb3246b5ab20f0bb9d69480ca0","ref":"refs/heads/main","pushedAt":"2023-11-14T18:59:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"update notebook","shortMessageHtmlLink":"update notebook"}},{"before":"115cc0472404964b6522ba693de638891a13f2c6","after":"3dcdd3fa1ff8dea66baca160c2554fe3c4e3c771","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-06T02:51:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"saksheesb","name":null,"path":"/saksheesb","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17769649?s=80&v=4"},"commit":{"message":"Changes for parsing S.gordonii data","shortMessageHtmlLink":"Changes for parsing S.gordonii data"}},{"before":null,"after":"115cc0472404964b6522ba693de638891a13f2c6","ref":"refs/heads/nanostring-data-functions","pushedAt":"2023-11-03T02:40:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"saksheesb","name":null,"path":"/saksheesb","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17769649?s=80&v=4"},"commit":{"message":"Merge pull request #8 from uflcod/add-xgboost-and-random-forest-to-figure-tItles\n\nadd RF and XBoost to figure titles","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"1963725361\" data-permission-text=\"Title is private\" data-url=\"https://github.com/uflcod/miRNA-periodontal-disease/issues/8\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/uflcod/miRNA-periodontal-disease/pull/8/hovercard\" href=\"https://github.com/uflcod/miRNA-periodontal-disease/pull/8\">#8</a> from uflcod/add-xgboost-and-random-forest-to-fi…"}},{"before":"e901805cd769316975f0fdf5ca4555aec6dd9f66","after":null,"ref":"refs/heads/add-xgboost-and-random-forest-to-figure-tItles","pushedAt":"2023-10-26T14:37:40.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"}},{"before":"bc1bc1de9b771ab53d1e093725c115cdc9aa0afb","after":"115cc0472404964b6522ba693de638891a13f2c6","ref":"refs/heads/main","pushedAt":"2023-10-26T14:37:39.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"Merge pull request #8 from uflcod/add-xgboost-and-random-forest-to-figure-tItles\n\nadd RF and XBoost to figure titles","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"1963725361\" data-permission-text=\"Title is private\" data-url=\"https://github.com/uflcod/miRNA-periodontal-disease/issues/8\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/uflcod/miRNA-periodontal-disease/pull/8/hovercard\" href=\"https://github.com/uflcod/miRNA-periodontal-disease/pull/8\">#8</a> from uflcod/add-xgboost-and-random-forest-to-fi…"}},{"before":null,"after":"e901805cd769316975f0fdf5ca4555aec6dd9f66","ref":"refs/heads/add-xgboost-and-random-forest-to-figure-tItles","pushedAt":"2023-10-26T14:36:21.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"},"commit":{"message":"add RF and XBoost to figure titles","shortMessageHtmlLink":"add RF and XBoost to figure titles"}},{"before":"95cef871e81b9a2c7d3ea86bf7372fb28bb09e9c","after":null,"ref":"refs/heads/miRNA-periodontal-disease-randomForest","pushedAt":"2023-10-24T17:57:08.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"wdduncan","name":"Bill Duncan","path":"/wdduncan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3186638?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wMi0wMVQyMToyMjo1OC4wMDAwMDBazwAAAAPvlwnl","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wMi0wMVQyMToyMjo1OC4wMDAwMDBazwAAAAPvlwnl","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0xMC0yNFQxNzo1NzowOC4wMDAwMDBazwAAAAOewvlh"}},"title":"Activity · uflcod/miRNA-periodontal-disease"}