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Benchmark suffix array index using different sparseness factors #6

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Tracked by #4
tibvdm opened this issue Mar 11, 2024 · 1 comment
Open
3 tasks
Tracked by #4

Benchmark suffix array index using different sparseness factors #6

tibvdm opened this issue Mar 11, 2024 · 1 comment

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@tibvdm
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tibvdm commented Mar 11, 2024

Benchmark the performance of the suffix array index with different sparseness factors:

  • Performance for different input peptide lengths

  • Total index size

  • Sparseness 2

  • Sparseness 3

  • Sparseness 4

@bmesuere
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bmesuere commented Jul 1, 2024

-> Already done in the thesis, add the results to the wiki page of #3

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