diff --git a/tools/dorado/README.md b/tools/dorado/README.md index da3061a7..c2c58bda 100644 --- a/tools/dorado/README.md +++ b/tools/dorado/README.md @@ -18,7 +18,7 @@ below). **You must do this when you update the wrapper**. The models are bundled in the container at `/models` and made available by the `dorado_models.loc` file. -The columns are `value`, `tool_version`, `name` and `path`. +The columns are `value`, `container_hash`, `name` and `path`. To update the list, modify `tool-data/dorado_models.loc.sample`. diff --git a/tools/dorado/dorado.xml b/tools/dorado/dorado.xml index bbce24b6..13477ed2 100644 --- a/tools/dorado/dorado.xml +++ b/tools/dorado/dorado.xml @@ -11,7 +11,7 @@ ln -s '$pod5_file' ./reads.pod5 && dorado basecaller '${model.fields.path}' reads.pod5 -> calls.bam +> tee calls.bam ]]>