From 43ccbee1eb90ff72ed6aa0e17015b15fce900860 Mon Sep 17 00:00:00 2001 From: admin Date: Wed, 9 Oct 2024 10:35:43 +0000 Subject: [PATCH 1/2] Jenkins update build 213 errors --- requests/arriba@45c2ec061cf9.yml | 7 +++++++ requests/cutesv@23d7e75d850e.yml | 7 +++++++ ...data_manager_gtdbtk_database_installer@3b1d503c6260.yml | 7 +++++++ requests/fasta_compute_length@5cbde03c1103.yml | 7 +++++++ requests/humann@c2803012bbb3.yml | 7 +++++++ requests/humann_regroup_table@8237a0f225db.yml | 7 +++++++ requests/humann_rename_table@aabf8cfb8fef.yml | 7 +++++++ requests/recentrifuge@591175c0f051.yml | 7 +++++++ 8 files changed, 56 insertions(+) create mode 100644 requests/arriba@45c2ec061cf9.yml create mode 100644 requests/cutesv@23d7e75d850e.yml create mode 100644 requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml create mode 100644 requests/fasta_compute_length@5cbde03c1103.yml create mode 100644 requests/humann@c2803012bbb3.yml create mode 100644 requests/humann_regroup_table@8237a0f225db.yml create mode 100644 requests/humann_rename_table@aabf8cfb8fef.yml create mode 100644 requests/recentrifuge@591175c0f051.yml diff --git a/requests/arriba@45c2ec061cf9.yml b/requests/arriba@45c2ec061cf9.yml new file mode 100644 index 000000000..dcfb1a418 --- /dev/null +++ b/requests/arriba@45c2ec061cf9.yml @@ -0,0 +1,7 @@ +tools: +- name: arriba + owner: iuc + revisions: + - 45c2ec061cf9 + tool_panel_section_label: RNA-seq + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/cutesv@23d7e75d850e.yml b/requests/cutesv@23d7e75d850e.yml new file mode 100644 index 000000000..bd687eeaf --- /dev/null +++ b/requests/cutesv@23d7e75d850e.yml @@ -0,0 +1,7 @@ +tools: +- name: cutesv + owner: iuc + revisions: + - 23d7e75d850e + tool_panel_section_label: Variant Calling + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml b/requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml new file mode 100644 index 000000000..b533d4eca --- /dev/null +++ b/requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml @@ -0,0 +1,7 @@ +tools: +- name: data_manager_gtdbtk_database_installer + owner: iuc + revisions: + - 3b1d503c6260 + tool_panel_section_label: None + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/fasta_compute_length@5cbde03c1103.yml b/requests/fasta_compute_length@5cbde03c1103.yml new file mode 100644 index 000000000..a12f058fe --- /dev/null +++ b/requests/fasta_compute_length@5cbde03c1103.yml @@ -0,0 +1,7 @@ +tools: +- name: fasta_compute_length + owner: devteam + revisions: + - 5cbde03c1103 + tool_panel_section_label: FASTA/FASTQ + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/humann@c2803012bbb3.yml b/requests/humann@c2803012bbb3.yml new file mode 100644 index 000000000..b9ef3077f --- /dev/null +++ b/requests/humann@c2803012bbb3.yml @@ -0,0 +1,7 @@ +tools: +- name: humann + owner: iuc + revisions: + - c2803012bbb3 + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/humann_regroup_table@8237a0f225db.yml b/requests/humann_regroup_table@8237a0f225db.yml new file mode 100644 index 000000000..7e26b9502 --- /dev/null +++ b/requests/humann_regroup_table@8237a0f225db.yml @@ -0,0 +1,7 @@ +tools: +- name: humann_regroup_table + owner: iuc + revisions: + - 8237a0f225db + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/humann_rename_table@aabf8cfb8fef.yml b/requests/humann_rename_table@aabf8cfb8fef.yml new file mode 100644 index 000000000..3be10c98c --- /dev/null +++ b/requests/humann_rename_table@aabf8cfb8fef.yml @@ -0,0 +1,7 @@ +tools: +- name: humann_rename_table + owner: iuc + revisions: + - aabf8cfb8fef + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/recentrifuge@591175c0f051.yml b/requests/recentrifuge@591175c0f051.yml new file mode 100644 index 000000000..ef2c0d29f --- /dev/null +++ b/requests/recentrifuge@591175c0f051.yml @@ -0,0 +1,7 @@ +tools: +- name: recentrifuge + owner: iuc + revisions: + - 591175c0f051 + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu From 2d166110486157525ff8704a0e90ad46fde7a781 Mon Sep 17 00:00:00 2001 From: cat-bro Date: Wed, 16 Oct 2024 11:27:24 +1100 Subject: [PATCH 2/2] Delete requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml --- ...data_manager_gtdbtk_database_installer@3b1d503c6260.yml | 7 ------- 1 file changed, 7 deletions(-) delete mode 100644 requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml diff --git a/requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml b/requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml deleted file mode 100644 index b533d4eca..000000000 --- a/requests/data_manager_gtdbtk_database_installer@3b1d503c6260.yml +++ /dev/null @@ -1,7 +0,0 @@ -tools: -- name: data_manager_gtdbtk_database_installer - owner: iuc - revisions: - - 3b1d503c6260 - tool_panel_section_label: None - tool_shed_url: toolshed.g2.bx.psu.edu