{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":133702954,"defaultBranch":"master","name":"deepcell-tf","ownerLogin":"vanvalenlab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-05-16T17:41:14.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/34583715?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1723156287.0","currentOid":""},"activityList":{"items":[{"before":"eb3d61975549f75ac52561fbaa9215134a39e3f1","after":"f1839a4eac03df1ceb17f28390bb7a1aa3f8dac8","ref":"refs/heads/master","pushedAt":"2024-08-30T17:06:21.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"DOC: Update application examples with from_version (#729)\n\n* Update model construction with from_version.\r\n\r\n* Replace deprecated tostring_rgb with buffer_rgba.\r\n\r\n* Modify linting configuration to ignore notebooks.\r\n\r\n* Fix docker testing workflow by freeing up space","shortMessageHtmlLink":"DOC: Update application examples with from_version (#729)"}},{"before":"1634b5fbe939e93f463e0385511f91170655839d","after":"eb3d61975549f75ac52561fbaa9215134a39e3f1","ref":"refs/heads/master","pushedAt":"2024-08-08T22:15:10.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"Prepare 0.12.10 release (#726)\n\n* Bump deepcell-tracking patch in deps.\r\n\r\n* Update release job.\r\n\r\n* Bump version number.\r\n\r\n* Explicit role to silence sphinx complaint.\r\n\r\n* Bump Python version for doc testing workflow.\r\n\r\n* Add .git-blame-ignore-revs.","shortMessageHtmlLink":"Prepare 0.12.10 release (#726)"}},{"before":"35bd755a5124ed67e536a44c90bef6f1a5a76f52","after":"1634b5fbe939e93f463e0385511f91170655839d","ref":"refs/heads/master","pushedAt":"2024-08-08T18:23:40.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"Bump copyright year to 2024. (#727)","shortMessageHtmlLink":"Bump copyright year to 2024. (#727)"}},{"before":"397cdcbbae34a4b801aed5414e55be3bb3b0db51","after":null,"ref":"refs/heads/caliban-paper-updates","pushedAt":"2024-07-05T18:48:31.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"}},{"before":"802ea72db5c3dfa99de6629c8ed897359965d92f","after":"35bd755a5124ed67e536a44c90bef6f1a5a76f52","ref":"refs/heads/master","pushedAt":"2024-07-05T18:48:30.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Update DNN dataset and Caliban models (#721)\n\n* Update DNN dataset to 1.1\r\n\r\n* Update models with new versions\r\n\r\n* Implement version options for the tracking and nuclear segmentation applications\r\n\r\n* Correct dataset zip files to contain folder that names the dataset\r\n\r\n* Spell version correctly in function name\r\n\r\n* Try to make docstring parser happy\r\n\r\nCo-authored-by: Ross Barnowski \r\n\r\n---------\r\n\r\nCo-authored-by: Ross Barnowski ","shortMessageHtmlLink":"Update DNN dataset and Caliban models (#721)"}},{"before":"bf4965a19914e91a5259f5b88d7590d02c92b81b","after":"397cdcbbae34a4b801aed5414e55be3bb3b0db51","ref":"refs/heads/caliban-paper-updates","pushedAt":"2024-07-05T18:35:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Try to make docstring parser happy\n\nCo-authored-by: Ross Barnowski ","shortMessageHtmlLink":"Try to make docstring parser happy"}},{"before":"fbe18678b07c20cceaafb65860c65286a8d64134","after":"bf4965a19914e91a5259f5b88d7590d02c92b81b","ref":"refs/heads/caliban-paper-updates","pushedAt":"2024-07-01T23:05:20.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Spell version correctly in function name","shortMessageHtmlLink":"Spell version correctly in function name"}},{"before":"e3f7065f3a4a3050d47c2eea782c466bb1ffedf3","after":"fbe18678b07c20cceaafb65860c65286a8d64134","ref":"refs/heads/caliban-paper-updates","pushedAt":"2024-07-01T18:08:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Implement version options for the tracking and nuclear segmentation applications","shortMessageHtmlLink":"Implement version options for the tracking and nuclear segmentation a…"}},{"before":null,"after":"e3f7065f3a4a3050d47c2eea782c466bb1ffedf3","ref":"refs/heads/caliban-paper-updates","pushedAt":"2024-06-29T01:18:23.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Update models with new versions","shortMessageHtmlLink":"Update models with new versions"}},{"before":"5f11090fa768f30ed3a3bf294b0350b849dff9ff","after":null,"ref":"refs/heads/lstm-bugfix","pushedAt":"2024-06-25T21:36:11.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"}},{"before":"2ef52e040133f01658fbb8262ba667b47013d11d","after":"802ea72db5c3dfa99de6629c8ed897359965d92f","ref":"refs/heads/master","pushedAt":"2024-06-25T21:36:10.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Correct the axis which temporal merges are applied to in tracking model (#718)\n\n* Apply temporal merge to the time dimensions, not the cell/batch dimension\r\n\r\n* Make the image norm layer in appearance head configurable\r\n\r\n* Remove import for a tracking config object\r\n\r\n* Fix spelling typo\r\n\r\nCo-authored-by: Ross Barnowski \r\n\r\n* Fix long line\r\n\r\n---------\r\n\r\nCo-authored-by: Ross Barnowski ","shortMessageHtmlLink":"Correct the axis which temporal merges are applied to in tracking mod…"}},{"before":"ccaca100ac2796f2e57c1100bef12883c8cf9290","after":"5f11090fa768f30ed3a3bf294b0350b849dff9ff","ref":"refs/heads/lstm-bugfix","pushedAt":"2024-06-25T19:57:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Fix long line","shortMessageHtmlLink":"Fix long line"}},{"before":"b2da5622b1889f2255ba648e20d16bb80d0e03b2","after":"ccaca100ac2796f2e57c1100bef12883c8cf9290","ref":"refs/heads/lstm-bugfix","pushedAt":"2024-06-25T19:56:49.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Merge branch 'master' into lstm-bugfix","shortMessageHtmlLink":"Merge branch 'master' into lstm-bugfix"}},{"before":"80c2107ac03401a87025f24f7644f5baf02a30a6","after":"b2da5622b1889f2255ba648e20d16bb80d0e03b2","ref":"refs/heads/lstm-bugfix","pushedAt":"2024-06-25T19:56:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Fix spelling typo\n\nCo-authored-by: Ross Barnowski ","shortMessageHtmlLink":"Fix spelling typo"}},{"before":"37cd96263f3ef29ed43df2da96726719f5e403a9","after":null,"ref":"refs/heads/mly/spotnet_v1_1","pushedAt":"2024-06-25T11:52:01.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"}},{"before":"af1379ac0c308d52ad011e887975dac236bfc76a","after":"2ef52e040133f01658fbb8262ba667b47013d11d","ref":"refs/heads/master","pushedAt":"2024-06-25T11:51:57.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"Add SpotNet v1.1 (#706)\n\n* Add SpotNet v1.1\r\n\r\n* Update spotnet version in gallery example.\r\n\r\n---------\r\n\r\nCo-authored-by: Ross Barnowski ","shortMessageHtmlLink":"Add SpotNet v1.1 (#706)"}},{"before":"e082bef3e4d253a3a46852c2ff17604641590ddf","after":"37cd96263f3ef29ed43df2da96726719f5e403a9","ref":"refs/heads/mly/spotnet_v1_1","pushedAt":"2024-06-25T10:40:37.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"Update spotnet version in gallery example.","shortMessageHtmlLink":"Update spotnet version in gallery example."}},{"before":"e6d7af84f1899a8c726bf778c30c340ca8130f71","after":"af1379ac0c308d52ad011e887975dac236bfc76a","ref":"refs/heads/master","pushedAt":"2024-06-25T10:38:31.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"General maintenance to make CI happy (#719)\n\n* Add missing doc dep required by nbsphinx.\r\n\r\n* Unmock numpy to fix doc build warnings.\r\n\r\n* Suppress warnings about nbsphinx breaking cache.\r\n\r\n* Update ruff configuration.\r\n\r\n* Ignore complaints about .format from linter.\r\n\r\n* Ignore remaing ruff complaints about string formatting.\r\n\r\n* Fix docstring formatting for test collection.\r\n\r\n* Install latest numpy 1.X series.\r\n\r\nTensorflow 2.8 definitely doesn't support numpy 2.","shortMessageHtmlLink":"General maintenance to make CI happy (#719)"}},{"before":"55171336cb0bacdbe926a5fa3ecdbdfef24d9472","after":"e082bef3e4d253a3a46852c2ff17604641590ddf","ref":"refs/heads/mly/spotnet_v1_1","pushedAt":"2024-06-24T22:49:56.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Merge branch 'master' into mly/spotnet_v1_1","shortMessageHtmlLink":"Merge branch 'master' into mly/spotnet_v1_1"}},{"before":"aaf0d448a86b9b1614ed2c8e4483edefbcec1336","after":"80c2107ac03401a87025f24f7644f5baf02a30a6","ref":"refs/heads/lstm-bugfix","pushedAt":"2024-06-24T22:48:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Remove import for a tracking config object","shortMessageHtmlLink":"Remove import for a tracking config object"}},{"before":"09ba804fed969bd9dc9011d6865481b9ad1fbf6d","after":"aaf0d448a86b9b1614ed2c8e4483edefbcec1336","ref":"refs/heads/lstm-bugfix","pushedAt":"2024-06-05T20:00:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Make the image norm layer in appearance head configurable","shortMessageHtmlLink":"Make the image norm layer in appearance head configurable"}},{"before":null,"after":"09ba804fed969bd9dc9011d6865481b9ad1fbf6d","ref":"refs/heads/lstm-bugfix","pushedAt":"2024-06-05T18:06:38.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Apply temporal merge to the time dimensions, not the cell/batch dimension","shortMessageHtmlLink":"Apply temporal merge to the time dimensions, not the cell/batch dimen…"}},{"before":"7fad97dc7444dd67340fee20c6e5ce8e975118b6","after":"35594fc6d39e99e589f6ad5ac31f5bf4119bf928","ref":"refs/heads/tracking-augmentation","pushedAt":"2024-04-12T00:48:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Recording leftover changes","shortMessageHtmlLink":"Recording leftover changes"}},{"before":"ae1d34508c60bddf821cdf6b6b462ec07e24d0e2","after":"7fad97dc7444dd67340fee20c6e5ce8e975118b6","ref":"refs/heads/tracking-augmentation","pushedAt":"2024-03-06T22:44:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Remove print statement","shortMessageHtmlLink":"Remove print statement"}},{"before":null,"after":"ae1d34508c60bddf821cdf6b6b462ec07e24d0e2","ref":"refs/heads/tracking-augmentation","pushedAt":"2024-03-06T22:24:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"msschwartz21","name":"Morgan Schwartz","path":"/msschwartz21","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20373588?s=80&v=4"},"commit":{"message":"Add random reflection augmentation for tracking","shortMessageHtmlLink":"Add random reflection augmentation for tracking"}},{"before":"e7ec1a0928e65ec2f10c9195ed756112d85e0470","after":"e6d7af84f1899a8c726bf778c30c340ca8130f71","ref":"refs/heads/master","pushedAt":"2024-01-18T05:03:33.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"DOC: Increase gallery thumbnail size (#695)\n\n* Custom CSS for larger gallery thumbnails.\r\n\r\n* Add missing mesmer app thumbnail.\r\n\r\n* Spruce up mesmer thumbnail (tight layout).\r\n\r\n* Force image rendering inside thumbnails w/ rel borders.","shortMessageHtmlLink":"DOC: Increase gallery thumbnail size (#695)"}},{"before":"0c0a268ce5123957fa4953b26185f0cad815a933","after":"e7ec1a0928e65ec2f10c9195ed756112d85e0470","ref":"refs/heads/master","pushedAt":"2024-01-17T20:49:03.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"Rm pins from doc dependencies. (#708)\n\nMoving to latest versions of doc deps seems to resolve the\r\nissues that motivated the pins in the first place.","shortMessageHtmlLink":"Rm pins from doc dependencies. (#708)"}},{"before":"f35fbeb36fec77b94cef58a3f598b392016852d3","after":"55171336cb0bacdbe926a5fa3ecdbdfef24d9472","ref":"refs/heads/mly/spotnet_v1_1","pushedAt":"2024-01-16T22:28:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"Update spotnet version in gallery example.","shortMessageHtmlLink":"Update spotnet version in gallery example."}},{"before":"8348872306efd4a1e63287d71a4c9857de697b84","after":"f35fbeb36fec77b94cef58a3f598b392016852d3","ref":"refs/heads/mly/spotnet_v1_1","pushedAt":"2024-01-16T21:16:10.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"Merge branch 'master' into mly/spotnet_v1_1","shortMessageHtmlLink":"Merge branch 'master' into mly/spotnet_v1_1"}},{"before":"259f35f574290a728cae966cb6f812cdccc2ab38","after":"0c0a268ce5123957fa4953b26185f0cad815a933","ref":"refs/heads/master","pushedAt":"2024-01-16T21:15:44.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"rossbar","name":"Ross Barnowski","path":"/rossbar","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1268991?s=80&v=4"},"commit":{"message":"CI: Update action versions and ruff incantation (#707)\n\n* Update ruff incantation in linting job.\r\n\r\n* Bump versions of all CI actions.\r\n\r\n* Update readthedocs config.\r\n\r\n* Configure CI to cancel running workflows when new version pushed.\r\n\r\n* Fix sphinx nitpicky warnings.","shortMessageHtmlLink":"CI: Update action versions and ruff incantation (#707)"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0zMFQxNzowNjoyMS4wMDAwMDBazwAAAASo4ne7","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0zMFQxNzowNjoyMS4wMDAwMDBazwAAAASo4ne7","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wMS0xNlQyMToxNTo0NC4wMDAwMDBazwAAAAPhamS4"}},"title":"Activity · vanvalenlab/deepcell-tf"}