From 2eeaacb80736b07b6f350db8fe52da5005b75cb4 Mon Sep 17 00:00:00 2001
From: Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com>
Date: Tue, 8 Sep 2015 18:54:17 +0100
Subject: [PATCH] Release 0.1.1

* Fix invalid Python 3 package (whl).
* Remove unused test data files.
* Remove strict dependence on matplotlib and pysam versions.
* Cleanup MANIFEST.
---
 HISTORY.rst                     |  9 +++++++--
 MANIFEST.in                     | 14 ++++++++++++--
 riboplot/__init__.py            |  2 +-
 setup.cfg                       |  3 ---
 setup.py                        |  9 ++++-----
 tests/data/css                  |  1 -
 tests/data/js                   |  1 -
 tests/data/ribocount.html       |  1 -
 tests/data/ribocount_index.html |  1 -
 tests/data/riboplot.html        |  1 -
 10 files changed, 24 insertions(+), 18 deletions(-)
 delete mode 120000 tests/data/css
 delete mode 120000 tests/data/js
 delete mode 120000 tests/data/ribocount.html
 delete mode 120000 tests/data/ribocount_index.html
 delete mode 120000 tests/data/riboplot.html

diff --git a/HISTORY.rst b/HISTORY.rst
index 0caa24e..0332a27 100644
--- a/HISTORY.rst
+++ b/HISTORY.rst
@@ -2,8 +2,13 @@
 
 History
 =======
+0.1.1 (2015-09-08)
+------------------
+* Remove invalid Python 3 version (whl).
+* Remove unused test data files.
+* Remove strict dependence on matplotlib and pysam versions.
+* Cleanup MANIFEST.
 
 0.1.0 (2015-08-24)
----------------------
-
+------------------
 * First release on PyPI.
diff --git a/MANIFEST.in b/MANIFEST.in
index e0f40d4..678dd05 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -1,2 +1,12 @@
-recursive-exclude * *.py[co]
-exclude riboplot/riboplot_multi.py
+include AUTHORS.rst
+include CONTRIBUTING.rst
+include HISTORY.rst
+include LICENSE
+
+recursive-include images *.png
+recursive-include docs *.rst Makefile make.bat conf.py
+recursive-include docs _static/*
+recursive-include docs _styles/fonts/*.ttf
+recursive-include docs _templates/*.html
+
+include tests/README.rst
diff --git a/riboplot/__init__.py b/riboplot/__init__.py
index 7572ff8..e1786ee 100644
--- a/riboplot/__init__.py
+++ b/riboplot/__init__.py
@@ -2,4 +2,4 @@
 
 __author__ = 'Vimalkumar Velayudhan'
 __email__ = 'vimalkumarvelayudhan@gmail.com'
-__version__ = '0.1.0'
+__version__ = '0.1.1'
diff --git a/setup.cfg b/setup.cfg
index 838cad3..04d4c97 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,6 +1,3 @@
-[wheel]
-universal = 1
-
 [pep8]
 ignore = E501
 max-line-length = 160
diff --git a/setup.py b/setup.py
index f500581..4555a50 100644
--- a/setup.py
+++ b/setup.py
@@ -14,7 +14,7 @@
 with open('HISTORY.rst') as history_file:
     history = history_file.read().replace('.. :changelog:', '')
 
-requirements = ['matplotlib==1.3.1', 'pysam==0.8.3']
+requirements = ['matplotlib', 'pysam', 'mock==1.0.1']
 
 test_requirements = [
     # TODO: put package test requirements here
@@ -22,14 +22,14 @@
 
 setup(
     name='riboplot',
-    version='0.1.0',
+    version='0.1.1',
     description="Plot read counts of RiboSeq data from BAM format alignment files",
     long_description=readme + '\n\n' + history,
     author="Vimalkumar Velayudhan",
     author_email='vimalkumarvelayudhan@gmail.com',
     url='https://github.com/vimalkumarvelayudhan/riboplot',
     packages=[
-        'riboplot',
+        'riboplot'
     ],
     package_dir={'riboplot':
                  'riboplot'},
@@ -54,6 +54,5 @@
             'ribocount = riboplot.ribocount:run']
     },
     package_data={'riboplot': ['data/*.html', 'data/css/*.gif', 'data/css/*.css',
-                               'data/js/*.js', 'data/js/*.map', 'scripts/*.sh']},
-    exclude_package_data={'tests': ['data/*.bam', 'data/*.bai', 'data/*.fna', 'data/*.fai']}
+                               'data/js/*.js', 'data/js/*.map', 'scripts/*.sh']}
 )
diff --git a/tests/data/css b/tests/data/css
deleted file mode 120000
index cfa1463..0000000
--- a/tests/data/css
+++ /dev/null
@@ -1 +0,0 @@
-../../data/css
\ No newline at end of file
diff --git a/tests/data/js b/tests/data/js
deleted file mode 120000
index 697b75f..0000000
--- a/tests/data/js
+++ /dev/null
@@ -1 +0,0 @@
-../../data/js
\ No newline at end of file
diff --git a/tests/data/ribocount.html b/tests/data/ribocount.html
deleted file mode 120000
index 4db59d9..0000000
--- a/tests/data/ribocount.html
+++ /dev/null
@@ -1 +0,0 @@
-../../data/ribocount.html
\ No newline at end of file
diff --git a/tests/data/ribocount_index.html b/tests/data/ribocount_index.html
deleted file mode 120000
index a710272..0000000
--- a/tests/data/ribocount_index.html
+++ /dev/null
@@ -1 +0,0 @@
-../../data/ribocount_index.html
\ No newline at end of file
diff --git a/tests/data/riboplot.html b/tests/data/riboplot.html
deleted file mode 120000
index f212f44..0000000
--- a/tests/data/riboplot.html
+++ /dev/null
@@ -1 +0,0 @@
-../../data/riboplot.html
\ No newline at end of file