manifest.json

{
  "name": "acpc-anat",
  "label": "VISTA Lab: ACPC-ANAT Normalize",
  "description": "Normalize anatomical NIfTI with the MNI template or with AC-PC coordinates provided by the user.",
  "author": "GLU <glerma@stanford.edu>",
  "maintainer": "GLU <glerma@stanford.edu>",
  "url": "https://github.com/vistalab/acpc-anat",
  "source": "https://github.com/vistalab/acpc-anat",
  "license": "MIT",
  "flywheel": {
    "suite": "VISTA Lab"
  },
  "version": "1.0.3",
  "custom": {
    "docker-image": "vistalab/acpc-anat:1.0.3"
  },
  "config": {
    "userProvidedAcpc": {
      "default": false,
      "type": "boolean",
      "description": "Use AC-PC coordinates provided by the user in the fields here (true/false, default=false)"
    },
    "AC": {
      "default": "128, 140, 60",
      "type": "string",
      "description": "Anterior Commissure coordinates (DEFAULT='[128, 140, 60]')."
    },
    "PC": {
      "default": "128, 110, 60",
      "type": "string",
      "description": "Posterior Commissure coordinates (DEFAULT='[128, 110, 60]')'."
    },
    "MS": {
      "default": "128, 135, 85",
      "type": "string",
      "description": "Mid Sagittal coordinates (DEFAULT='[128, 135, 85]')'."
    }
  },
  "inputs": {
    "anatomical": {
      "base": "file",
      "description": "Anatomical T1w NIfTI file.",
      "type": {
        "enum": [
          "nifti"
        ]
      }
    }
  }