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flowchart.dot
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digraph "flowchart" {
p0 [shape=point,label="",fixedsize=true,width=0.1,xlabel="Channel.fromPath"];
p1 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="ifEmpty"];
p0 -> p1;
p1 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="ifEmpty"];
p2 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p1 -> p2;
p2 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p3 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="collect"];
p2 -> p3;
p3 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="collect"];
p15 [label="filter_human_single"];
p3 -> p15 [label="BWT_FILES"];
p4 [shape=point,label="",fixedsize=true,width=0.1,xlabel="Channel.from"];
p5 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p4 -> p5;
p5 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p6 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="ifEmpty"];
p5 -> p6;
p6 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="ifEmpty"];
p20 [label="snap_single"];
p6 -> p20 [label="SNAP_INDEXES_CH"];
p7 [shape=point,label="",fixedsize=true,width=0.1,xlabel="Channel.fromPath"];
p8 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="ifEmpty"];
p7 -> p8;
p8 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="ifEmpty"];
p9 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p8 -> p9;
p9 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p10 [label="validate_single"];
p9 -> p10 [label="input_read_ch"];
p10 [label="validate_single"];
p13 [label="trimmomatic_single"];
p10 -> p13;
p11 [shape=point,label="",fixedsize=true,width=0.1];
p13 [label="trimmomatic_single"];
p11 -> p13 [label="TRIMMOMATIC_JAR"];
p12 [shape=point,label="",fixedsize=true,width=0.1];
p13 [label="trimmomatic_single"];
p12 -> p13 [label="TRIMMOMATIC_ADAPTER"];
p13 [label="trimmomatic_single"];
p14 [label="bbMask_Single"];
p13 -> p14;
p14 [label="bbMask_Single"];
p15 [label="filter_human_single"];
p14 -> p15;
p15 [label="filter_human_single"];
p17 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="toSortedList"];
p15 -> p17;
p15 [label="filter_human_single"];
p16 [shape=point];
p15 -> p16;
p17 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="toSortedList"];
p18 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="flatten"];
p17 -> p18;
p18 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="flatten"];
p19 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="collate"];
p18 -> p19;
p19 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="collate"];
p20 [label="snap_single"];
p19 -> p20;
p20 [label="snap_single"];
p21 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="flatten"];
p20 -> p21;
p21 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="flatten"];
p22 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p21 -> p22;
p22 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="map"];
p23 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p22 -> p23;
p23 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p24 [label="collect_snap_results"];
p23 -> p24;
p24 [label="collect_snap_results"];
p25 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="transpose"];
p24 -> p25;
p25 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="transpose"];
p28 [label="CLOMP_summary"];
p25 -> p28;
p26 [shape=point,label="",fixedsize=true,width=0.1];
p28 [label="CLOMP_summary"];
p26 -> p28 [label="BLAST_CHECK_DB"];
p27 [shape=point,label="",fixedsize=true,width=0.1];
p28 [label="CLOMP_summary"];
p27 -> p28 [label="kraken_db/"];
p28 [label="CLOMP_summary"];
p29 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p28 -> p29;
p28 [label="CLOMP_summary"];
p30 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p28 -> p30;
p28 [label="CLOMP_summary"];
p34 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p28 -> p34;
p29 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p33 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="join"];
p29 -> p33;
p30 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p31 [shape=point];
p30 -> p31;
p32 [shape=point,label="",fixedsize=true,width=0.1];
p33 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="join"];
p32 -> p33;
p33 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="join"];
p37 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="join"];
p33 -> p37;
p34 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="groupTuple"];
p35 [shape=point];
p34 -> p35;
p36 [shape=point,label="",fixedsize=true,width=0.1];
p37 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="join"];
p36 -> p37;
p37 [shape=circle,label="",fixedsize=true,width=0.1,xlabel="join"];
p40 [label="generate_report"];
p37 -> p40;
p38 [shape=point,label="",fixedsize=true,width=0.1];
p40 [label="generate_report"];
p38 -> p40 [label="BLAST_CHECK_DB"];
p39 [shape=point,label="",fixedsize=true,width=0.1];
p40 [label="generate_report"];
p39 -> p40 [label="kraken_db/"];
p40 [label="generate_report"];
p43 [shape=point];
p40 -> p43;
p40 [label="generate_report"];
p42 [shape=point];
p40 -> p42;
p40 [label="generate_report"];
p41 [shape=point];
p40 -> p41;
}