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DESCRIPTION
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DESCRIPTION
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Package: PublicDataResources
Type: Package
Title: Public Data Resources in Bioconductor
Version: 0.2.2
Authors@R: c(person("Sean", "Davis", email = "[email protected]",
role = c("aut")),
person("Benjamin", "Haibe-Kains", email = "[email protected]",
role = "aut"),
person("Levi", "Waldron", email = "[email protected]",
role = c("aut", "cre")))
Description: The goal of this workshop is to introduce Bioconductor
packages for finding, accessing, and using large-scale public data
resources including the Gene Expression Omnibus GEO, the Genomic Data Commons GDC, and Bioconductor-hosted
curated data resources for metagenomics, pharmacogenomics PharmacoDB,
and The Cancer Genome Atlas.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
VignetteBuilder:
knitr,
rmarkdown
Suggests:
knitr,
pkgdown,
rmarkdown
Imports:
BiocStyle,
igraph,
ggplot2,
magrittr,
MultiAssayExperiment,
GEOquery,
GenomicDataCommons,
curatedTCGAData,
TCGAutils,
cBioPortalData,
recount,
curatedMetagenomicData,
phyloseq,
HMP16SData,
TCGAbiolinks,
PharmacoGx
DockerImage: waldronlab/publicdataresources:latest
URL: https://waldronlab.io/PublicDataResources/