setup.py

from setuptools import setup, find_packages

setup(name='pensa',
      version='0.2.8',
      description='PENSA - protein ensemble analysis',
      url='http://github.com/drorlab/pensa',
      author='Martin Voegele, Neil Thomson, Sang Truong, Jasper McAvity',
      author_email='mvoegele@stanford.edu',
      license='MIT',
      packages=find_packages(include=[
        'pensa',
        'pensa.preprocessing',
        'pensa.features',
        'pensa.comparison',
        'pensa.dimensionality',
        'pensa.clusters',
        'pensa.statesinfo',
      ]),
      zip_safe=False,
      install_requires=[
        'numpy',
        'scipy>=1.2',
        'mdtraj==1.9.3',
        'mdshare',
        'pyemma',
        'MDAnalysis',
        'matplotlib',
        'biotite',
        'gpcrmining', 
      ],
      classifiers=[
        # How mature is this project? Common values are
        #   3 - Alpha
        #   4 - Beta
        #   5 - Production/Stable
        'Development Status :: 4 - Beta',
        # license (should match "license" above)
        'License :: OSI Approved :: MIT License',
        # Supported Python versions
        'Programming Language :: Python :: 3',
      ],)