From 568add888bf44102e3b53bdf9e4f17fe6c2c6bee Mon Sep 17 00:00:00 2001
From: Evelyn Schmidt <evelyn@wustl.edu>
Date: Tue, 26 Sep 2023 11:42:47 -0500
Subject: [PATCH] changed star fusion cpus to 24 and turned off preempting

---
 definitions/tools/star_fusion_detect.wdl | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/definitions/tools/star_fusion_detect.wdl b/definitions/tools/star_fusion_detect.wdl
index 20df8db..5e8ae4d 100644
--- a/definitions/tools/star_fusion_detect.wdl
+++ b/definitions/tools/star_fusion_detect.wdl
@@ -24,12 +24,12 @@ task starFusionDetect {
     Float? min_ffpm_level = 0.05
   }
 
-  Int cores = 12
+  Int cores = 24
   Float zip_size = size(star_fusion_genome_dir_zip, "GB")
   Float fastq_size = size(flatten([fastq, fastq2]), "GB")
   Int space_needed_gb = 10 + round(3 * (zip_size + fastq_size))
   runtime {
-    preemptible: 1
+    preemptible: 0
     maxRetries: 2
     memory: "64GB"
     cpu: cores