From af67af8875704828dce90250d94aafd39fd78770 Mon Sep 17 00:00:00 2001
From: sridhar0605 <sridhar0605@gmail.com>
Date: Thu, 14 Dec 2023 10:26:30 -0600
Subject: [PATCH 1/4] adding somatic wgs to dockstore

---
 .dockstore.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.dockstore.yml b/.dockstore.yml
index 8e313cc4..8576cbb4 100644
--- a/.dockstore.yml
+++ b/.dockstore.yml
@@ -1,8 +1,8 @@
 version: 1.2
 workflows:
  - subclass: WDL
-   primaryDescriptorPath: /definitions/immuno.wdl
-   name: immuno
+   primaryDescriptorPath: /definitions/soamtic_wgs.wdl
+   name: somatic_wgs
    authors:
     - orcid: 0000-0003-4266-6700 #chrisamiller
     - orcid: 0000-0002-6388-446X #malachig

From 0b3ab557dddb1baee77d2cc1c398921a63f96d49 Mon Sep 17 00:00:00 2001
From: sridhar0605 <sridhar0605@gmail.com>
Date: Thu, 14 Dec 2023 10:35:12 -0600
Subject: [PATCH 2/4] last typo fix in year 2023

---
 .dockstore.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.dockstore.yml b/.dockstore.yml
index 8576cbb4..0bf0cd9f 100644
--- a/.dockstore.yml
+++ b/.dockstore.yml
@@ -1,7 +1,7 @@
 version: 1.2
 workflows:
  - subclass: WDL
-   primaryDescriptorPath: /definitions/soamtic_wgs.wdl
+   primaryDescriptorPath: /definitions/somatic_wgs.wdl
    name: somatic_wgs
    authors:
     - orcid: 0000-0003-4266-6700 #chrisamiller

From e227bc79abf30f596ba7ec967101284162c4ed1c Mon Sep 17 00:00:00 2001
From: sridhar0605 <sridhar0605@gmail.com>
Date: Thu, 14 Dec 2023 10:54:42 -0600
Subject: [PATCH 3/4] edit dockstore to reflect both workflows

---
 .dockstore.yml | 27 +++++++++++++++++++++++++++
 1 file changed, 27 insertions(+)

diff --git a/.dockstore.yml b/.dockstore.yml
index 0bf0cd9f..a40eaa2b 100644
--- a/.dockstore.yml
+++ b/.dockstore.yml
@@ -1,5 +1,32 @@
 version: 1.2
 workflows:
+ - subclass: WDL
+   primaryDescriptorPath: /definitions/immuno.wdl
+   name: immuno
+   authors:
+    - orcid: 0000-0003-4266-6700 #chrisamiller
+    - orcid: 0000-0002-6388-446X #malachig
+    - orcid: 0000-0003-4378-7328 #susannasiebert
+    - orcid: 0000-0002-0577-4705 #tmooney
+    - orcid: 0000-0001-6293-4632 #sridhar0605
+    - orcid: 0009-0002-2565-0774 #johnegarza
+    - orcid: 0000-0001-7547-5789 #jasonwalker80
+    - orcid: 0000-0003-1928-7139 #zlskidmore
+    - orcid: 0000-0002-7648-1360 #bryanfisk
+    - orcid: 0000-0003-0944-3126 #acoffman
+    - orcid: 0000-0002-2584-5320 #jhundal
+    - orcid: 0000-0002-9704-408X #Matthew-Mosior
+    - orcid: 0000-0002-3024-6891 #apaul7
+    - name: John Maruska #johnmaruska
+    - name: Layth Aljorani #Layth17
+    - name: Sai Mukund Ramakrishnan #saimukund20
+    - name: Feiyu Du #dufeiyu
+    - name: Saad Khan #smk5g5
+    - name: Samuel Peters #sam16711
+    - name: Agata Gruszczynska #GruA
+    - name: Gue Su Chang #guesu, gschang
+    - name: Irenaeus Chan #IrenaeusChan
+    - name: Chad Tomlinson #chad388
  - subclass: WDL
    primaryDescriptorPath: /definitions/somatic_wgs.wdl
    name: somatic_wgs

From c986c326ce00b640643537cafaa7195cf8eb04e8 Mon Sep 17 00:00:00 2001
From: sridhar0605 <sridhar0605@gmail.com>
Date: Fri, 15 Dec 2023 11:07:08 -0600
Subject: [PATCH 4/4] variant call wdl

---
 .dockstore.yml | 27 +++++++++++++++++++++++++++
 1 file changed, 27 insertions(+)

diff --git a/.dockstore.yml b/.dockstore.yml
index a40eaa2b..7ed51ce5 100644
--- a/.dockstore.yml
+++ b/.dockstore.yml
@@ -54,3 +54,30 @@ workflows:
     - name: Gue Su Chang #guesu, gschang
     - name: Irenaeus Chan #IrenaeusChan
     - name: Chad Tomlinson #chad388
+- subclass: WDL
+   primaryDescriptorPath: /definitions/detect_variants_wgs.wdl
+   name: detect_variants_wgs
+   authors:
+    - orcid: 0000-0003-4266-6700 #chrisamiller
+    - orcid: 0000-0002-6388-446X #malachig
+    - orcid: 0000-0003-4378-7328 #susannasiebert
+    - orcid: 0000-0002-0577-4705 #tmooney
+    - orcid: 0000-0001-6293-4632 #sridhar0605
+    - orcid: 0009-0002-2565-0774 #johnegarza
+    - orcid: 0000-0001-7547-5789 #jasonwalker80
+    - orcid: 0000-0003-1928-7139 #zlskidmore
+    - orcid: 0000-0002-7648-1360 #bryanfisk
+    - orcid: 0000-0003-0944-3126 #acoffman
+    - orcid: 0000-0002-2584-5320 #jhundal
+    - orcid: 0000-0002-9704-408X #Matthew-Mosior
+    - orcid: 0000-0002-3024-6891 #apaul7
+    - name: John Maruska #johnmaruska
+    - name: Layth Aljorani #Layth17
+    - name: Sai Mukund Ramakrishnan #saimukund20
+    - name: Feiyu Du #dufeiyu
+    - name: Saad Khan #smk5g5
+    - name: Samuel Peters #sam16711
+    - name: Agata Gruszczynska #GruA
+    - name: Gue Su Chang #guesu, gschang
+    - name: Irenaeus Chan #IrenaeusChan
+    - name: Chad Tomlinson #chad388