NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(to_basic,GeomShape)
export(StatDiagonalWideArc)
export(addGRLgaps)
export(addGRgaps)
export(ale2violin)
export(annotateGRLfromGRL)
export(annotateGRfromGR)
export(assignGRLexonNames)
export(bgaPlotly3d)
export(closestExonToJunctions)
export(codonUsage2df)
export(combineGRcoverage)
export(compressPolygonM)
export(curateDFtoDF)
export(curateVtoDF)
export(defineDetectedTx)
export(detectedTxInfo)
export(df2colorSub)
export(dfWide2segments)
export(dna2codon)
export(escapeWhitespaceRegexp)
export(exoncov2polygon)
export(factor2label)
export(findOverlapsGRL)
export(flattenExonsBy)
export(gene2gg)
export(geom_diagonal_wide_arc)
export(geomean)
export(getFirstStrandedFromGRL)
export(getGRLgaps)
export(getGRcoverageFromBw)
export(getGRgaps)
export(get_fn_envir)
export(grl2df)
export(groups2contrasts)
export(import_juncs_from_bed)
export(intercalate)
export(jamCai)
export(jamGeomean)
export(jam_isDisjoint)
export(jitter_norm)
export(launchSashimiApp)
export(list2im)
export(makeTx2geneFromGtf)
export(make_ref2compressed)
export(plotSashimi)
export(prepareSashimi)
export(psl2df)
export(runDiffSplice)
export(sashimiAppConstants)
export(sashimiAppServer)
export(sashimiAppUI)
export(sashimiDataConstants)
export(shrinkMatrix)
export(simplifyXY)
export(sortGRL)
export(sortSamples)
export(spliceGR2junctionDF)
export(spline3d)
export(stackJunctions)
export(stat_diagonal_wide_arc)
export(strsplitOrdered)
export(tx2ale)
import(GenomicRanges)
import(data.table)
import(dplyr)
import(ggplot2)
import(htmltools)
import(jamba)
import(plotly)
import(shiny)
import(shinyWidgets)
import(shinydashboard)
import(shinydashboardPlus)
importFrom(magrittr,"%>%")
importFrom(plotly,subplot)