Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fail to get the denoised matrix in the output folder #41

Open
YSPeng1225 opened this issue Aug 1, 2024 · 1 comment
Open

Fail to get the denoised matrix in the output folder #41

YSPeng1225 opened this issue Aug 1, 2024 · 1 comment

Comments

@YSPeng1225
Copy link

Thanks for your contributions.

I encountered an issue when I used Sprod on my own spatial transcriptomic data. The log.txt file indicated no error but I failed to find the denoised matrix in the output folder. I used Sprod on 12 samples and two of them lost the imputed gene expression matrix. I have attached my log.txt files for you to look over. Thank you very much if you could help me handle this!
sprod_log.txt
sprod.log

@wtwt5237
Copy link
Collaborator

@YSPeng1225 , is there anything special about those two samples that have problems, compared with the other 10 datasets?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants