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name: burn_cell_metal_chem | ||
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on: [pull_request] | ||
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jobs: | ||
burn_cell_metal_chem: | ||
runs-on: ubuntu-latest | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: 0 | ||
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- name: Get AMReX | ||
run: | | ||
mkdir external | ||
cd external | ||
git clone https://github.com/AMReX-Codes/amrex.git | ||
cd amrex | ||
git checkout development | ||
echo 'AMREX_HOME=$(GITHUB_WORKSPACE)/external/amrex' >> $GITHUB_ENV | ||
echo $AMREX_HOME | ||
if [[ -n "${AMREX_HOME}" ]]; then exit 1; fi | ||
cd ../.. | ||
- name: Install dependencies | ||
run: | | ||
sudo apt-get update -y -qq | ||
sudo apt-get -qq -y install curl cmake jq clang g++>=9.3.0 | ||
- name: Compile | ||
run: | | ||
cd unit_test/burn_cell_metal_chem | ||
make -j 2 | ||
- name: Run and compare outputs for different Z values | ||
run: | | ||
set -e | ||
cd unit_test/burn_cell_metal_chem | ||
declare -A line_numbers_map=( | ||
["Z=1"]="4461 4463 4465 4467 4468 4471 4472 4475 4481 4486" | ||
["Z=1_z10"]="1613 1615 4456 4458 4460 4463 4470 4476 4481" | ||
["Z=1e-1"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463" | ||
["Z=1e-2"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463" | ||
["Z=1e-3"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463" | ||
["Z=1e-4"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463" | ||
["Z=1e-5"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463" | ||
["Z=1e-6"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463" | ||
) | ||
declare -A ref_map=( | ||
["Z=1"]="reference_solution_1.out" | ||
["Z=1_z10"]="reference_solution_1_z10.out" | ||
["Z=1e-1"]="reference_solution_1e-1.out" | ||
["Z=1e-2"]="reference_solution_1e-2.out" | ||
["Z=1e-3"]="reference_solution_1e-3.out" | ||
["Z=1e-4"]="reference_solution_1e-4.out" | ||
["Z=1e-5"]="reference_solution_1e-5.out" | ||
["Z=1e-6"]="reference_solution_1e-6.out" | ||
) | ||
ref_line_number_z10=(1 2 3 5 7 10 17 23 28) | ||
# Original input file | ||
original_input_file="inputs_metal_chem_1" | ||
modified_input_file="inputs_metal_chem_modified" | ||
for Z in "Z=1" "Z=1_z10" "Z=1e-1" "Z=1e-2" "Z=1e-3" "Z=1e-4" "Z=1e-5" "Z=1e-6"; do | ||
cp $original_input_file $modified_input_file | ||
Z_val=${Z//Z=/} | ||
if [[ "$Z" == "Z=1_z10" ]]; then | ||
# Modify the redshift line for Z=1_z10 | ||
sed -i 's/network.redshift = 0.0/network.redshift = 10.0/g' $modified_input_file | ||
else | ||
# Replace the metallicity and dust2gas_ratio values for other Z values | ||
sed -i 's/network.metallicity = .*/network.metallicity = '"$Z_val"'/g' $modified_input_file | ||
sed -i 's/network.dust2gas_ratio = .*/network.dust2gas_ratio = '"$Z_val"'/g' $modified_input_file | ||
fi | ||
output_file="test_${Z_val}.out" | ||
./main1d.gnu.DEBUG.ex $modified_input_file amrex.fpe_trap_{invalid,zero,overflow}=1 > $output_file | ||
line_numbers="${line_numbers_map[$Z]}" | ||
ref_file="${ref_map[$Z]}" | ||
error_found=false | ||
index=0 | ||
for line_number in $line_numbers; do | ||
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' $output_file) | ||
# Adjust the line number for the reference file | ||
if [[ "$Z" == "Z=1" ]]; then | ||
reference_line_number=$((line_number - 4460)) | ||
elif [[ "$Z" == "Z=1_z10" ]]; then | ||
reference_line_number=${ref_line_number_z10[$index]} | ||
else | ||
reference_line_number=$((line_number - 4437)) | ||
fi | ||
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' $ref_file) | ||
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }') | ||
if (( $(echo "$difference > 0.01" | bc -l) )); then | ||
echo "Z: $Z" | ||
echo "Line number: $line_number" | ||
echo "Value in $output_file: $value1" | ||
echo "Value in $ref_file: $value2" | ||
echo "Difference between test and reference value is $difference, more than allowed threshold of 0.01" | ||
echo | ||
error_found=true | ||
fi | ||
index=$((index + 1)) | ||
done | ||
if [[ $error_found == true ]]; then | ||
exit 1 | ||
fi | ||
done | ||
- name: Print backtrace if any failure | ||
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }} | ||
run: cat unit_test/burn_cell_metal_chem/Backtrace.0 | ||
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name: macos_burn_cell_metal_chem | ||
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on: [pull_request] | ||
jobs: | ||
burn_cell: | ||
runs-on: macos-13 | ||
steps: | ||
- uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: 0 | ||
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- name: Install dependencies | ||
run: | | ||
brew install cmake openmpi python3 || true | ||
brew link --overwrite [email protected] | ||
- name: Compile and run | ||
run: | | ||
mkdir build && cd build | ||
cmake .. -DBUILD_UNIT_TEST_MC=true -DBUILD_AMReX=true | ||
make -j2 | ||
ctest --output-on-failure |
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CEXE_headers += actual_eos.H | ||
CEXE_headers += actual_eos_data.H | ||
CEXE_sources += actual_eos_data.cpp |
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