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some more cleaning of spherical #5

some more cleaning of spherical

some more cleaning of spherical #5

Workflow file for this run

name: toy_atm
on: [pull_request]
jobs:
toy_atm:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Get AMReX
run: |
mkdir external
cd external
git clone https://github.com/AMReX-Codes/amrex.git
cd amrex
git checkout development
echo 'AMREX_HOME=$(GITHUB_WORKSPACE)/external/amrex' >> $GITHUB_ENV
echo $AMREX_HOME
if [[ -n "${AMREX_HOME}" ]]; then exit 1; fi
cd ../..
- name: Get Microphysics
run: |
cd external
git clone https://github.com/AMReX-Astro/Microphysics.git
cd Microphysics
git checkout development
echo 'MICROPHYSICS_HOME=$(GITHUB_WORKSPACE)/external/Microphysics' >> $GITHUB_ENV
echo $MICROPHYSICS_HOME
if [[ -n "${MICROPHYSICS_HOME}" ]]; then exit 1; fi
cd ../..
- name: Install dependencies
run: |
sudo apt-get update -y -qq
sudo apt-get -qq -y install curl cmake jq clang g++>=9.3.0
- name: Compile
run: |
cd toy_atm
make -j2
- name: Run with regular grid
run: |
cd toy_atm
./initialmodel1d.gnu.ex inputs_xrb_mixed.hi_dens.tall.CNO
- name: Compare to stored output
run: |
cd toy_atm
diff toy_xrb.hi_dens.hse.tanh.delta_12.00cm.dx_3.00cm ci-benchmarks/toy_xrb.hi_dens.hse.tanh.delta_12.00cm.dx_3.00cm