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Neutron Multiplicity toolchain (#245)
* added framework for simple reco * added Factory & Unity * added muon and neutron identification cuts in ClusterClassifiers * add FindNeutrons tool * added FindNeutrons * new tool * updated Makefile & Setup.sh * fixed compilation errors in FindNeutrons & ClusterClassifiers * more compilation fixes * moved neutron finding algorithms to FindNeutrons tool * SimpleReconstruction & FindNeutrons progress * wip SimpleReconstruction * first version SimpleReco + FindNeutrons * first working version of simple reco * added extended window and beamok flag to EventSelector * fix for variables SimpleReco/NeutronMult tools * add tree framework to NeutronMultiplicity tool * fill more variables in output tree * added BoostStore read-in and store mode for NeutronMultiplicity * Update README of FindNeutrons Added README of FindNeutrons tool with relevant information * Update README of SimpleReconstruction Added README with basic properties of SimpleReconstruction tool * Update README of NeutronMultiplicity tool Added README with description of properties of NeutronMultiplicity tool. * moved some variables to RecoEvent instead of ANNIEEvent * Update visible_energy_vertex.C Removed unnecessary parts of the code (which were commented out) * Update neutrino_selection.C Added verbose configuration variable * Update reconstruction_migration.C Added verbose configuration variable * Update and rename plot_neutrons_mc_new.C to plot_neutrons_mc.C rename + add configuration variable verbose * Update and rename plot_neutrons_dirt.C to plot_neutrons_data_dirt.C Rename + add verbose configuration variable * Update and rename plot_neutrons_data_new.C to plot_neutrons_data_beam.C Rename + add verbose configuration variable * Create README.md Added README for the root-scripts * Update README.md Extended description * Update README.md Added text to README file * Update README.md Added additional sentence about ReadFromBoostStore version of the toolchain * wip NeutronMultiplicity * re-add LoadGenieEvent & PrintGenieEvent * Add FindParticlePdgs to MCRecoEventLoader * more MRD variables in SimpleReco tool * add MC version of NeutronMultiplicity toolchain * Add Particles object in LoadWCSim * verbosity changes * add primary/secondary information for neutron captures * more verbosity cleanup * add efficiency map in FindNeutrons * add effiency map in NeutronMultiplicity * Add transverse momentum in SimpleReconstruction * Add neutron efficiency scripts (MC) * bugfix in neutronmultiplicity efficiency correction * add scripts for running on many files * Reduced verbosity of NeutronMultiplicity tool * Added NeutronMultiplicity script for filtered ANNIEEvent BoostStore input files * config file madness * removed duplicate filelist file * Update README.md update readme of NeutronMultiplicity tool * Update README.md update README of FindNeutrons tool * Add NHits method for neutron candidates * add event offset to LoadGenieEvent tool * toolchain modifications for different neutron cuts
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