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  1. Colormap-scatter-plot-from-track-data Colormap-scatter-plot-from-track-data Public

    This script plots the x and y coordinates of a track with time as colormap

    MATLAB 1

  2. Molecular-Rack-and-Pinion Molecular-Rack-and-Pinion Public

    These codes are used for image analysis Reference: Shrivastava and Berg, BioRxiv, 2019

    MATLAB

  3. Rotary-Motor-Current-Biol.-2015 Rotary-Motor-Current-Biol.-2015 Public

    These codes were used to fit an ellipse to a tethered bacterial cell. The frame-by-frame center of mass of the rotating cell was measured and plotted in the x-y spatial domain.

    MATLAB

  4. Screw-like-bacterial-motion-Biophysical-J.-2016 Screw-like-bacterial-motion-Biophysical-J.-2016 Public

    MATLAB

  5. Growth-tracker-MATLAB Growth-tracker-MATLAB Public

    This code measures the area of E. coli cells growing on agar surface from a video file. At the end of the code it plots the change in area as a function of time.

    MATLAB

  6. Particle-Tracker-MATLAB Particle-Tracker-MATLAB Public

    Particle tracker​​​​​​​ (MATLAB): This code tracks the centroid of a moving bacterial cell. At the end of the code it plots the centroids from consecutive frames. 

    MATLAB