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Achievement: YOLOAchievement: Pair Extraordinairex2Achievement: Pull Sharkx2Achievement: Quickdraw

Achievements

Achievement: YOLOAchievement: Pair Extraordinairex2Achievement: Pull Sharkx2Achievement: Quickdraw

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@stjude-dnb-binfcore

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AntoniaChroni/README.md

Hi, I’m Tonia 😊

I’m a Senior Bioinformatics Research Scientist at the Bioinformatics Core at the Department of Develpmental Neurobiology at the St. Jude Children’s Research Hospital.

📊️ Support project analysis

🚀 Build and automate computational workflows and pipelines

🧬 Extensive experience with WGS/WES, sc-RNA-Seq, sc-ATAC-Seq and sc-TCR/BCR-Seq analysis in the context of tumor evolution and microenvironment

👷 Passionate about computation, automation and reproducibility for scientists

Research

I am an evolutionary computational biologist by training with extensive expertise in molecular evolution and phylogenetics, ecology and biogeography in the context of species and cancer.

📝 “Tumor Island Biogeography” (TIB) framework: I introduced TIB proposing that tumors are evolutionary islands and their heterogeneity can be explored by using omics data in the clinical setting (Chroni, 2024 and Chroni and Kumar, 2021).

🚀 Co-developed PathFinder, a computational Bayesian method that uses the clone phylogeny, their genetic differentiation, and anatomical locations to infer cancer’s migration history in a patient.

😃 For more details on my work and research, please visit my digital 🏠 or my LinkedIn 🏠 or Google scholar profile.

Here’s some stats on my GitHub repos

My recent GitHub activity

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  1. stjude-dnb-binfcore/sc-rna-seq-snap stjude-dnb-binfcore/sc-rna-seq-snap Public

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  2. stjude-dnb-binfcore/trainings stjude-dnb-binfcore/trainings Public

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  3. stjude-dnb-binfcore/epigenomic-profiling-analysis stjude-dnb-binfcore/epigenomic-profiling-analysis Public

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  4. KIDS24-team1 KIDS24-team1 Public

    Forked from stjude-biohackathon/KIDS24-team1

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  5. pbta-tumor-evolution pbta-tumor-evolution Public

    Forked from d3b-center/pbta-tumor-evolution

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  6. pbta-splicing pbta-splicing Public

    Forked from d3b-center/pbta-splicing

    Splicing analysis across the PBTA

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