release v2024-08-15

ApolloDev · Aug 15, 2024 · 9126c96 · 9126c96
1 parent 31ac4b6
commit 9126c96
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Showing 15 changed files with 42,203 additions and 42,384 deletions.
diff --git a/apollo_sv-base.json b/apollo_sv-base.json
diff --git a/apollo_sv-base.obo b/apollo_sv-base.obo
diff --git a/apollo_sv-base.owl b/apollo_sv-base.owl
diff --git a/apollo_sv-full.json b/apollo_sv-full.json
diff --git a/apollo_sv-full.obo b/apollo_sv-full.obo
diff --git a/apollo_sv-full.owl b/apollo_sv-full.owl
diff --git a/apollo_sv.json b/apollo_sv.json
diff --git a/apollo_sv.obo b/apollo_sv.obo
diff --git a/apollo_sv.owl b/apollo_sv.owl
diff --git a/src/ontology/imports/geo_import.owl b/src/ontology/imports/geo_import.owl
@@ -7,8 +7,8 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/apollo_sv/imports/geo_import.owl>
-<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-13/imports/geo_import.owl>
-Annotation(owl:versionInfo "2024-08-13")
+<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/imports/geo_import.owl>
+Annotation(owl:versionInfo "2024-08-15")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/APOLLO_SV_00000008>))
 Declaration(Class(<http://purl.obolibrary.org/obo/APOLLO_SV_00000032>))
@@ -2690,7 +2690,7 @@ AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/GEO_000000006>
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/GEO_000000006> "geopolitical dependency"@en)
 SubClassOf(<http://purl.obolibrary.org/obo/GEO_000000006> <http://purl.obolibrary.org/obo/GEO_000000004>)
 
-# Class: <http://purl.obolibrary.org/obo/GEO_000000007> (group of major administrative subdivisions)
+# Class: <http://purl.obolibrary.org/obo/GEO_000000007> (aggregate of major administrative subdivisions)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/GEO_000000007> "An aggregate of governmental organizations that is not itself a major administrative subdivision and whose members are only major administrative subdivisions that have some feature in common."@en)
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000117> <http://purl.obolibrary.org/obo/GEO_000000007> "Amanda Hicks"@en)

diff --git a/src/ontology/imports/go_import.owl b/src/ontology/imports/go_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/apollo_sv/imports/go_import.owl>
-<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-13/imports/go_import.owl>
+<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/imports/go_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/go/releases/2024-06-17/go.owl>)
-Annotation(owl:versionInfo "2024-08-13")
+Annotation(owl:versionInfo "2024-08-15")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/GO_0007610>))
 Declaration(Class(<http://purl.obolibrary.org/obo/GO_0008150>))

diff --git a/src/ontology/imports/ido_import.owl b/src/ontology/imports/ido_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/apollo_sv/imports/ido_import.owl>
-<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-13/imports/ido_import.owl>
+<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/imports/ido_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/ido/2017-11-03/ido.owl>)
-Annotation(owl:versionInfo "2024-08-13")
+Annotation(owl:versionInfo "2024-08-15")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000001>))
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000002>))
@@ -122,6 +122,7 @@ Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0001015>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0001025>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0002211>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0002212>))
+Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0002234>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0002297>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0002350>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/RO_0002351>))
@@ -687,6 +688,15 @@ AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000589> <http://purl.ob
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0002212> "negatively regulates"@en)
 SubObjectPropertyOf(<http://purl.obolibrary.org/obo/RO_0002212> <http://purl.obolibrary.org/obo/RO_0002211>)
 
+# Object Property: <http://purl.obolibrary.org/obo/RO_0002234> (has output)
+
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000114> <http://purl.obolibrary.org/obo/RO_0002234> <http://purl.obolibrary.org/obo/IAO_0000125>)
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/RO_0002234> "p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.")
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000117> <http://purl.obolibrary.org/obo/RO_0002234> "Chris Mungall")
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000118> <http://purl.obolibrary.org/obo/RO_0002234> "produces")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0002234> "has output"@en)
+SubObjectPropertyOf(<http://purl.obolibrary.org/obo/RO_0002234> <http://purl.obolibrary.org/obo/RO_0000057>)
+
 # Object Property: <http://purl.obolibrary.org/obo/RO_0002297> (results in formation of)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000112> <http://purl.obolibrary.org/obo/RO_0002297> "every \"endocardial cushion formation\" (GO:0003272) results_in_formation_of some \"endocardial cushion\" (UBERON:0002062)"@en)

diff --git a/src/ontology/imports/mf_import.owl b/src/ontology/imports/mf_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/apollo_sv/imports/mf_import.owl>
-<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-13/imports/mf_import.owl>
+<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/imports/mf_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/MF/2022-07-19/MF.owl>)
-Annotation(owl:versionInfo "2024-08-13")
+Annotation(owl:versionInfo "2024-08-15")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000001>))
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000002>))

diff --git a/src/ontology/imports/pno_import.owl b/src/ontology/imports/pno_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/apollo_sv/imports/pno_import.owl>
-<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-13/imports/pno_import.owl>
+<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/imports/pno_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/iao/pno/dev/pno.owl>)
-Annotation(owl:versionInfo "2024-08-13")
+Annotation(owl:versionInfo "2024-08-15")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/APOLLO_SV_00000008>))
 Declaration(Class(<http://purl.obolibrary.org/obo/APOLLO_SV_00000032>))

diff --git a/src/ontology/imports/ro_import.owl b/src/ontology/imports/ro_import.owl
@@ -7,9 +7,9 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/apollo_sv/imports/ro_import.owl>
-<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-13/imports/ro_import.owl>
+<http://purl.obolibrary.org/obo/apollo_sv/releases/2024-08-15/imports/ro_import.owl>
 Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/ro/releases/2024-04-24/ro.owl>)
-Annotation(owl:versionInfo "2024-08-13")
+Annotation(owl:versionInfo "2024-08-15")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000003>))